TomoSeq data search

Data search

Results for MligTC455_20564

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_20564	32613	679.43	Mlig455_058127	Neo: - Age: logFC(26M/2M)=1.827	RPS3A	Mlig455_058127 {REF} {Length: 1860} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=334, Expect=4e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=1e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=1e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=303, Expect=3e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=283, Expect=2e-96]} {RNA1509_13182, RNA1509_23431, RNA1509_3301, RNA1509_49526} {RNA1310_36604, RNA1509_13182, RNA1509_3301, RNA1509_49526} {RNA1509_13182, RNA1509_3301, RNA1509_49526, RNA815_17001}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_20564

32613

679.43

Mlig455_058127

Neo: -

Age: logFC(26M/2M)=1.827

RPS3A

Mlig455_058127 {REF} {Length: 1860} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=334, Expect=4e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=1e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=1e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=303, Expect=3e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=283, Expect=2e-96]} {RNA1509_13182, RNA1509_23431, RNA1509_3301, RNA1509_49526} {RNA1310_36604, RNA1509_13182, RNA1509_3301, RNA1509_49526} {RNA1509_13182, RNA1509_3301, RNA1509_49526, RNA815_17001}

Cumulative graph for MligTC455_20564

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.825	9.448	0.00558	0.23308
RegionR2	-0.532	9.448	0.02449	0.17434
RegionR3	0.256	9.448	0.20474	0.74496
RegionR4	0.48	9.448	0.03257	0.14389
RegionR5	0.565	9.448	0.00356	0.02687
RegionR6	0.313	9.448	0.11862	0.62820
RegionR7	0.241	9.448	0.23096	0.85448
RegionR8	-0.498	9.448	0.03068	0.34240

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.249	9.448	0.48440	1.00000
RegenerationR2	-0.101	9.448	0.70211	0.95720
RegenerationR3	-0.182	9.448	0.49302	0.85506
RegenerationR4	-0.377	9.448	0.16618	0.60113
RegenerationR5	-0.715	9.448	0.00648	0.14676
RegenerationR6	-0.042	9.448	0.87506	1.00000
RegenerationBL	0.293	9.448	0.19102	0.52516
RegenerationTP	0.092	9.448	0.70492	1.00000

Genes with expression patterns similar to MligTC455_20564

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_20564	32613	679.43	Mlig455_058127	Neo: - Age: logFC(26M/2M)=1.827	RPS3A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_058127 {REF} {Length: 1860} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=334, Expect=4e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=1e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=1e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=303, Expect=3e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=283, Expect=2e-96]} {RNA1509_13182, RNA1509_23431, RNA1509_3301, RNA1509_49526} {RNA1310_36604, RNA1509_13182, RNA1509_3301, RNA1509_49526} {RNA1509_13182, RNA1509_3301, RNA1509_49526, RNA815_17001}
2.	MligTC455_20563	35024	729.67	Mlig455_009057	Neo: Int S/G2/M Age: Down-Down-Up	RPS3A	5.816	0.957	0.959	0.983	0.998	0.930	0.989	Mlig455_009057 {REF} {Length: 1852} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=333, Expect=9e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=2e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=301, Expect=9e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=281, Expect=8e-96]} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1310_36604, RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048, RNA815_17001}
3.	MligTC455_19823	44194	920.7	Mlig455_008974	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.335	RPL7A	1.901	-	-	-	0.952	-	0.949	Mlig455_008974 {REF} {Length: 969} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=84.6]} {Human: ENSG00000148303, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]; ENSG00000280858, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]} {Mouse: ENSMUSG00000062647, Rpl7a, ribosomal protein L7A, [RH, Score=338, Expect=1e-117]} {Dmel: FBgn0014026, RpL7A, Ribosomal protein L7A, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00004419, rpl-7A, 60S ribosomal protein L7a, [RH, Score=305, Expect=1e-104]} {Smed: dd_Smed_v6_296_0_1, dd_Smed_v6_296_0_1, [RH, Score=300, Expect=1e-102]} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1310_38447, RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420, RNA815_17072}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_20564

32613

679.43

Mlig455_058127

Neo: -

Age: logFC(26M/2M)=1.827

RPS3A

1.000

MligTC455_20563

35024

729.67

Mlig455_009057

Neo: Int S/G2/M

Age: Down-Down-Up

RPS3A

5.816

0.957

0.959

0.983

0.998

0.930

0.989

Mlig455_009057 {REF} {Length: 1852} {TRANSSPLICED} {Pfam: Ribosomal S3Ae family [PF01015.20, score=253.9]} {Human: ENSG00000145425, RPS3A, ribosomal protein S3A, [RH, Score=333, Expect=9e-116]} {Mouse: ENSMUSG00000028081, Rps3a1, ribosomal protein S3A1, [RH, Score=335, Expect=2e-116]} {Dmel: FBgn0017545, RpS3A, Ribosomal protein S3A, [RH, Score=271, Expect=2e-91]} {Celegans: WBGene00004470, rps-1, 40S ribosomal protein S3a, [RH, Score=301, Expect=9e-104]} {Smed: dd_Smed_v6_163_0_1, dd_Smed_v6_163_0_1, [RH, Score=281, Expect=8e-96]} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1310_36604, RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048} {RNA1509_1769, RNA1509_20631, RNA1509_23431, RNA1509_2792, RNA1509_332, RNA1509_7364, RNA1509_9048, RNA815_17001}

MligTC455_19823

44194

920.7

Mlig455_008974

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.335

RPL7A

1.901

0.952

0.949

Mlig455_008974 {REF} {Length: 969} {TRANSSPLICED} {Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=84.6]} {Human: ENSG00000148303, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]; ENSG00000280858, RPL7A, ribosomal protein L7a, [RH, Score=338, Expect=2e-117]} {Mouse: ENSMUSG00000062647, Rpl7a, ribosomal protein L7A, [RH, Score=338, Expect=1e-117]} {Dmel: FBgn0014026, RpL7A, Ribosomal protein L7A, [RH, Score=301, Expect=5e-103]} {Celegans: WBGene00004419, rpl-7A, 60S ribosomal protein L7a, [RH, Score=305, Expect=1e-104]} {Smed: dd_Smed_v6_296_0_1, dd_Smed_v6_296_0_1, [RH, Score=300, Expect=1e-102]} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1310_38447, RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420} {RNA1509_2102, RNA1509_274, RNA1509_30291, RNA1509_420, RNA815_17072}