Data search


search
Exact
Search

Results for MligTC455_20421

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_20421 31 0.65 Mlig455_010709

Neo: -

Age: -

Region-enriched R7: 3.787/0.04771

Mlig455_010709 {REF} {Length: 2034} {RNA1310_48353}

Cumulative graph for MligTC455_20421

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.51 1.069 0.17838 0.80658
RegionR2 3.987 1.069 0.00411 0.05672
RegionR3 1.186 1.069 0.42051 0.94390
RegionR4 -3.449 1.069 0.99990 1.00000
RegionR5 -2.231 1.069 1.00000 1.00000
RegionR6 -0.149 1.069 0.97135 1.00000
RegionR7 3.787 1.069 0.00156 0.04771
RegionR8 2.379 1.069 0.19995 0.79725

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.129 1.069 0.99993 1.00000
RegenerationR2 -3.928 1.069 0.00033 0.02451
RegenerationR3 -2.55 1.069 0.02266 0.27258
RegenerationR4 -0.188 1.069 0.40829 0.81921
RegenerationR5 -1.906 1.069 0.05851 0.38527
RegenerationR6 -4.195 1.069 0.00658 0.09928
RegenerationBL -6.272 1.069 0.00413 0.05795
RegenerationTP -5.339 1.069 0.02075 0.24667


Genes with expression patterns similar to MligTC455_20421

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_20421 31 0.65 Mlig455_010709

Neo: -

Age: -

Region-enriched R7: 3.787/0.04771

4 1.000 1.000 1.000 - 1.000 - Mlig455_010709 {REF} {Length: 2034} {RNA1310_48353}
2. MligTC455_20420 28 0.57 Mlig455_010620

Neo: -

Age: -

2.615 0.996 0.860 - - 0.759 - Mlig455_010620 {REF} {Length: 2849} {RNA1310_48353}
3. MligTC455_53691 186 3.88 Mlig455_028004, Mlig455_028031

Neo: Germline

Age: -

0.978 - - - - 0.978 -

Mlig455_028004 {REF} {Length: 2754} {Pfam: Nicastrin [PF05450.17, score=32.9]} {RNA1509_36563} {RNA1310_38194} {RNA815_38164}

Mlig455_028031 {REF} {Length: 2844} {Pfam: Nicastrin [PF05450.17, score=32.9]} {RNA1509_36563} {RNA1310_29244} {RNA815_38164}
4. MligTC455_51186 86 1.79 Mlig455_012864

Neo: -

Age: Up-Down-Down

CLCN1 0.971 - - 0.971 - - - Mlig455_012864 {REF} {Length: 4861} {Pfam: Voltage gated chloride channel [PF00654.22, score=186.4]} {Human: ENSG00000188037, CLCN1, chloride voltage-gated channel 1, [Score=179, Expect=1e-45]} {Mouse: ENSMUSG00000029862, Clcn1, chloride channel, voltage-sensitive 1, [Score=175, Expect=2e-44]} {Dmel: FBgn0051116, ClC-a, Chloride channel-a, [Score=167, Expect=6e-42]} {Celegans: WBGene00000530, clh-3, Chloride channel protein clh-3, [Score=209, Expect=3e-55]} {Smed: dd_Smed_v6_12606_0_1, dd_Smed_v6_12606_0_1, [RH, Score=181, Expect=7e-47]} {RNA1310_30491} {RNA815_34327}
5. MligTC455_03503 75 1.57 Mlig455_042645

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.368

0.969 - - 0.969 - - - Mlig455_042645 {REF} {Length: 2491} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=36.7]} {Smed: dd_Smed_v6_8117_0_1, dd_Smed_v6_8117_0_1, [Score=77.8, Expect=2e-15]} {RNA1509_19205, RNA1509_53675} {RNA1310_10802.1, RNA1509_19205, RNA1509_53675} {RNA1509_19205, RNA1509_53675, RNA815_4389.1}
6. MligTC455_19581 60 1.24 Mlig455_002754

Neo: -

Age: Down-Down-Up

CCDC24 0.969 - - 0.969 - - - Mlig455_002754 {REF} {Length: 3665} {TRANSSPLICED} {Pfam: Coiled-coil domain-containing protein 24 family [PF15669.7, score=124.2]} {Human: ENSG00000159214, CCDC24, coiled-coil domain containing 24, [Score=69.3, Expect=8e-13]} {Smed: dd_Smed_v6_16835_0_1, dd_Smed_v6_16835_0_1, [Score=136, Expect=2e-37]} {RNA1310_34434} {RNA815_28600}
7. MligTC455_33469 85 1.76 Mlig455_013902

Neo: -

Age: -

0.956 - - 0.956 - - - Mlig455_013902 {REF} {Length: 260} {NoTransDecoderORF} {RNA1509_42818} {RNA1310_58695} {RNA815_11113.1}
8. MligTC455_29984 53 1.1 Mlig455_039009

Neo: -

Age: -

0.951 - - 0.951 - - - Mlig455_039009 {REF} {Length: 2751} {Pfam: Mab-21 protein [PF03281.16, score=23.2]} {RNA1509_59266} {RNA1310_36780} {RNA815_5358.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA