Data search
Results for MligTC455_41549
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_41549 | 1912 | 39.84 | Mlig455_018620 | Neo: - Age: Down-Up-Down |
Mlig455_018620 {REF} {Length: 1355} {RNA1509_11971} {RNA1310_12238} {RNA815_7772} |
Cumulative graph for MligTC455_41549
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.9 | 5.435 | 0.25962 | 0.90750 | |
| RegionR2 | 0.375 | 5.435 | 0.28167 | 0.66828 | |
| RegionR3 | -0.186 | 5.435 | 0.54273 | 1.00000 | |
| RegionR4 | -0.061 | 5.435 | 0.86072 | 1.00000 | |
| RegionR5 | 0.055 | 5.435 | 0.84317 | 1.00000 | |
| RegionR6 | 0.041 | 5.435 | 0.89044 | 1.00000 | |
| RegionR7 | 0.365 | 5.435 | 0.30192 | 0.93663 | |
| RegionR8 | 0.31 | 5.435 | 0.47820 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.231 | 5.435 | 0.83075 | 1.00000 | |
| RegenerationR2 | 0.401 | 5.435 | 0.19465 | 0.63929 | |
| RegenerationR3 | 0.648 | 5.435 | 0.05997 | 0.41714 | |
| RegenerationR4 | 0.218 | 5.435 | 0.53185 | 0.88462 | |
| RegenerationR5 | 0.345 | 5.435 | 0.29444 | 0.72218 | |
| RegenerationR6 | 0.622 | 5.435 | 0.06822 | 0.32750 | |
| RegenerationBL | 1.054 | 5.435 | 0.00122 | 0.02606 | |
| RegenerationTP | -0.222 | 5.435 | 0.57598 | 0.94717 |
Genes with expression patterns similar to MligTC455_41549
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_41549 | 1912 | 39.84 | Mlig455_018620 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018620 {REF} {Length: 1355} {RNA1509_11971} {RNA1310_12238} {RNA815_7772} | |
| 2. | MligTC455_27783 | 1484 | 30.92 | Mlig455_035810 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.770/0.04450 |
PAK1 | 2.628 | 0.735 | - | - | 0.935 | 0.958 | - | Mlig455_035810 {REF} {Length: 4597} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=236.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=161.7]; P21-Rho-binding domain [PF00786.30, score=38.5]; ABC1 atypical kinase-like domain [PF03109.18, score=25.7]; Kinase-like [PF14531.8, score=23.7]; Fungal protein kinase [PF17667.3, score=22.8]; Phosphotransferase enzyme family [PF01636.25, score=20.2]} {Human: ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=335, Expect=3e-107]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=335, Expect=1e-107]; ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=333, Expect=2e-106]} {Mouse: ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=335, Expect=2e-107]; ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=334, Expect=2e-107]; ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=333, Expect=1e-106]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=336, Expect=7e-105]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=325, Expect=3e-105]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [RH, Score=367, Expect=2e-121]} {RNA1509_14484, RNA1509_18868, RNA1509_31969, RNA1509_33044, RNA1509_33197, RNA1509_4715, RNA1509_56367} {RNA1310_5360.1, RNA1509_14484, RNA1509_18868, RNA1509_31969, RNA1509_33044, RNA1509_33197, RNA1509_4715, RNA1509_56367} {RNA1509_14484, RNA1509_18868, RNA1509_31969, RNA1509_33044, RNA1509_33197, RNA1509_4715, RNA1509_56367, RNA815_4593} |
| 3. | MligTC455_25660 | 349 | 7.27 | Mlig455_028851 | Neo: - Age: - |
DMD | 1.88 | - | - | - | 0.950 | 0.930 | - | Mlig455_028851 {REF} {Length: 13310} {TRANSSPLICED} {Pfam: EF-hand [PF09069.13, score=126.8]; EF hand [PF09068.13, score=112.6]; Calponin homology (CH) domain [PF00307.33, score=78.3]; Spectrin repeat [PF00435.23, score=43.6]; Zinc finger, ZZ type [PF00569.19, score=41.4]; WW domain [PF00397.28, score=18.9]} {Human: ENSG00000198947, DMD, dystrophin, [Score=480, Expect=2e-140]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [Score=478, Expect=2e-134]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=427, Expect=5e-126]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [Score=309, Expect=2e-83]} {Smed: dd_Smed_v6_5325_0_4, dd_Smed_v6_5325_0_4, [RH, Score=370, Expect=7e-102]} {RNA1509_15585, RNA1509_25378, RNA1509_29072, RNA1509_40198, RNA1509_53239} {RNA1310_283.1, RNA1509_15585, RNA1509_29072, RNA1509_40198, RNA1509_53239} {RNA1509_15585, RNA1509_29072, RNA1509_40198, RNA1509_53239, RNA815_544.1} |
| 4. | MligTC455_38029 | 1407 | 29.31 | Mlig455_035405 | Neo: - |
0.955 | - | - | - | 0.955 | - | - | Mlig455_035405 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: Human growth factor-like EGF [PF12661.9, score=19.4]} {Dmel: FBgn0051195, CG31195, [Score=241, Expect=2e-67]} {Smed: dd_Smed_v6_2407_0_1, dd_Smed_v6_2407_0_1, [RH, Score=743, Expect=0.0]} {RNA1509_26346, RNA1509_49411, RNA1509_9433} {RNA1310_2254.1, RNA1509_26346, RNA1509_49411} {RNA1509_26346, RNA1509_49411, RNA815_1766} | |
| 5. | MligTC455_20601 | 737 | 15.35 | Mlig455_005180 | Neo: - Age: - |
TMF1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_005180 {REF} {Length: 10687} {TRANSSPLICED} {Pfam: TATA element modulatory factor 1 TATA binding [PF12325.10, score=75.5]} {Human: ENSG00000144747, TMF1, TATA element modulatory factor 1, [RH, Score=264, Expect=8e-72]} {Mouse: ENSMUSG00000030059, Tmf1, TATA element modulatory factor 1, [RH, Score=263, Expect=1e-71]} {Dmel: FBgn0029912, CG4557, [RH, Score=119, Expect=9e-27]} {Smed: dd_Smed_v6_4248_0_1, dd_Smed_v6_4248_0_1, [RH, Score=251, Expect=8e-69]} {RNA1509_26682, RNA1509_9354} {RNA1310_1796, RNA1509_26682} {RNA1509_26682, RNA815_8516} |
| 6. | MligTC455_38028 | 1449 | 30.2 | Mlig455_035402 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_035402 {REF} {Length: 4171} {TRANSSPLICED} {Dmel: FBgn0051195, CG31195, [Score=237, Expect=7e-66]} {Smed: dd_Smed_v6_2407_0_1, dd_Smed_v6_2407_0_1, [RH, Score=732, Expect=0.0]} {RNA1509_25328, RNA1509_2668} {RNA1310_2254.1, RNA1509_25328} {RNA1509_25328, RNA815_1766} |
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