Data search
Results for MligTC455_20775
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20775 | 102 | 2.12 | Mlig455_028869 | Neo: Irradiation Age: - |
Mlig455_028869 {REF} {Length: 2646} {TRANSSPLICED} {Pfam: Nuf2 family [PF03800.16, score=19.4]} {RNA1509_42670} {RNA1310_22763.1} {RNA815_14177} |
Cumulative graph for MligTC455_20775
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.702 | 2.175 | 0.21623 | 0.85705 | |
| RegionR2 | 0.854 | 2.175 | 0.50135 | 0.88076 | |
| RegionR3 | 0.515 | 2.175 | 0.61400 | 1.00000 | |
| RegionR4 | 1.05 | 2.175 | 0.35427 | 0.67642 | |
| RegionR5 | 1.002 | 2.175 | 0.27908 | 0.60654 | |
| RegionR6 | 0.885 | 2.175 | 0.39546 | 0.96886 | |
| RegionR7 | 1.126 | 2.175 | 0.36972 | 1.00000 | |
| RegionR8 | 0.271 | 2.175 | 0.79647 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.931 | 2.175 | 0.99985 | 1.00000 | |
| RegenerationR2 | -0.229 | 2.175 | 0.77818 | 0.98283 | |
| RegenerationR3 | 0.85 | 2.175 | 0.32253 | 0.75057 | |
| RegenerationR4 | 0.063 | 2.175 | 0.92073 | 1.00000 | |
| RegenerationR5 | 1.59 | 2.175 | 0.01676 | 0.22504 | |
| RegenerationR6 | 1.047 | 2.175 | 0.22121 | 0.56553 | |
| RegenerationBL | -3.861 | 2.175 | 0.13253 | 0.43375 | |
| RegenerationTP | 0.57 | 2.175 | 0.65743 | 0.99241 |
Genes with expression patterns similar to MligTC455_20775
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20775 | 102 | 2.12 | Mlig455_028869 | Neo: Irradiation Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028869 {REF} {Length: 2646} {TRANSSPLICED} {Pfam: Nuf2 family [PF03800.16, score=19.4]} {RNA1509_42670} {RNA1310_22763.1} {RNA815_14177} | |
| 2. | MligTC455_32206 | 196 | 4.09 | Mlig455_069409 | Neo: - Age: - Region-enriched R5: 2.268/0.00534 |
2.556 | 0.747 | - | - | - | 0.849 | 0.960 | Mlig455_069409 {REF} {Length: 1896} {Pfam: Porphyromonas-type peptidyl-arginine deiminase [PF04371.17, score=73.9]} {RNA1509_24742} {RNA1310_26295} {RNA815_29609} | |
| 3. | MligTC455_14395 | 59 | 1.23 | Mlig455_057259 | Neo: - Age: logFC(26M/2M)=2.782 Region-enriched R4: 5.399/0.02503 |
TRPM3 | 0.974 | - | - | 0.974 | - | - | - | Mlig455_057259 {REF} {Length: 3226} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=36.3]; Ankyrin repeats (many copies) [PF13637.8, score=27.7]; Ankyrin repeat [PF00023.32, score=19.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=78.2, Expect=7e-14]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=77.4, Expect=7e-14]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=98.2, Expect=9e-21]} {RNA1310_13431} {RNA815_14236} |
| 4. | MligTC455_43246 | 236 | 4.91 | Mlig455_040249 | Neo: - |
0.972 | - | - | - | 0.972 | - | - | Mlig455_040249 {REF} {Length: 3468} {TRANSSPLICED} {Celegans: WBGene00018026, F35A5.4, [Score=81.3, Expect=2e-16]} {RNA1509_33968} {RNA1310_10002.1} {RNA815_6021} | |
| 5. | MligTC455_34871 | 183 | 3.82 | Mlig455_053108 | Neo: - Age: - |
CDC26 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_053108 {REF} {Length: 1209} {TRANSSPLICED} {Pfam: Anaphase-promoting complex APC subunit CDC26 [PF10471.11, score=28.4]} {Human: ENSG00000176386, CDC26, cell division cycle 26, [Score=45.4, Expect=2e-07]} {Mouse: ENSMUSG00000066149, Cdc26, cell division cycle 26, [Score=44.7, Expect=2e-07]} {RNA1509_31363} {RNA1310_28541.2} {RNA815_19141.1} |
| 6. | MligTC455_50332 | 167 | 3.47 | Mlig455_045442 | Neo: - Age: - |
TGFBR1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_045442 {REF} {Length: 2893} {Pfam: Protein kinase domain [PF00069.27, score=95.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=92.0]; ABC1 atypical kinase-like domain [PF03109.18, score=30.4]; Transforming growth factor beta type I GS-motif [PF08515.14, score=20.1]} {Human: ENSG00000106799, TGFBR1, transforming growth factor beta receptor 1, [Score=261, Expect=4e-81]; ENSG00000135503, ACVR1B, activin A receptor type 1B, [Score=254, Expect=3e-78]} {Mouse: ENSMUSG00000007613, Tgfbr1, transforming growth factor, beta receptor I, [Score=263, Expect=3e-82]; ENSMUSG00000000532, Acvr1b, activin A receptor, type 1B, [Score=253, Expect=2e-77]} {Dmel: FBgn0011300, babo, baboon, [Score=259, Expect=3e-79]} {Celegans: WBGene00000897, daf-1, Cell surface receptor daf-1, [Score=187, Expect=1e-51]} {Smed: dd_Smed_v6_3426_0_1, dd_Smed_v6_3426_0_1, [Score=229, Expect=2e-67]} {RNA1509_17304, RNA1509_38608} {RNA1310_10744, RNA1509_38608} {RNA1509_38608, RNA815_11070} |
| 7. | MligTC455_23509 | 171 | 3.57 | Mlig455_050440 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_050440 {REF} {Length: 4626} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.2]} {RNA1509_25100, RNA1509_54444} {RNA1310_6777.1, RNA1509_25100, RNA1509_54444} {RNA1509_25100, RNA1509_54444, RNA815_15707} | |
| 8. | MligTC455_40216 | 27 | 0.56 | Mlig455_058445 | Neo: Irradiation Age: Down-Down-Up |
0.952 | - | - | - | 0.952 | - | - | Mlig455_058445 {REF} {Length: 1556} {TRANSSPLICED} {Pfam: A49-like RNA polymerase I associated factor [PF06870.14, score=100.7]} {RNA1509_19206} {RNA1310_18855.1} {RNA815_26021.1} | |
| 9. | MligTC455_42164 | 65 | 1.35 | Mlig455_049056 | Neo: Int S/G2/M Age: Down-Up-Down |
DR1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_049056 {REF} {Length: 1819} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=70.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=32.0]; CENP-W protein [PF15510.8, score=24.7]} {Human: ENSG00000117505, DR1, down-regulator of transcription 1, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000029265, Dr1, down-regulator of transcription 1, [RH, Score=132, Expect=5e-39]} {Dmel: FBgn0028926, NC2beta, Negative Cofactor 2beta, [RH, Score=127, Expect=6e-37]} {Celegans: WBGene00001092, dro-1, DR1 (One) transcription factor family, [RH, Score=90.1, Expect=1e-22]} {Smed: dd_Smed_v6_7479_0_1, dd_Smed_v6_7479_0_1, [RH, Score=125, Expect=2e-36]} {RNA1509_7108} {RNA1310_37108, RNA1509_7108} {RNA1509_7108, RNA815_17293} |
| 10. | MligTC455_51323 | 114 | 2.37 | Mlig455_036899 | Neo: - Age: - Region-enriched R5: 2.522/0.00479 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_036899 {REF} {Length: 2524} {TRANSSPLICED} {Pfam: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 [PF15299.8, score=18.6]} {RNA1310_11295.1} {RNA815_14627} |
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