Data search
Results for MligTC455_51323
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51323 | 114 | 2.37 | Mlig455_036899 | Neo: - Age: - Region-enriched R5: 2.522/0.00479 |
Mlig455_036899 {REF} {Length: 2524} {TRANSSPLICED} {Pfam: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 [PF15299.8, score=18.6]} {RNA1310_11295.1} {RNA815_14627} |
Cumulative graph for MligTC455_51323
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.51 | 2.155 | 0.13056 | 0.72914 | |
| RegionR2 | 0.99 | 2.155 | 0.42194 | 0.81282 | |
| RegionR3 | 0.775 | 2.155 | 0.46469 | 0.97296 | |
| RegionR4 | 0.737 | 2.155 | 0.48863 | 0.81593 | |
| RegionR5 | 2.522 | 2.155 | 0.00038 | 0.00479 | |
| RegionR6 | 1.562 | 2.155 | 0.10912 | 0.60282 | |
| RegionR7 | -0.853 | 2.155 | 0.98345 | 1.00000 | |
| RegionR8 | 0.777 | 2.155 | 0.56508 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.254 | 2.155 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.512 | 2.155 | 0.47304 | 0.85894 | |
| RegenerationR3 | 0.732 | 2.155 | 0.33850 | 0.76281 | |
| RegenerationR4 | 0.763 | 2.155 | 0.32477 | 0.76201 | |
| RegenerationR5 | 0.179 | 2.155 | 0.75314 | 0.97254 | |
| RegenerationR6 | -0.242 | 2.155 | 0.75793 | 0.95610 | |
| RegenerationBL | -1.135 | 2.155 | 0.42353 | 0.79164 | |
| RegenerationTP | -0.068 | 2.155 | 0.96388 | 1.00000 |
Genes with expression patterns similar to MligTC455_51323
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51323 | 114 | 2.37 | Mlig455_036899 | Neo: - Age: - Region-enriched R5: 2.522/0.00479 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036899 {REF} {Length: 2524} {TRANSSPLICED} {Pfam: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 [PF15299.8, score=18.6]} {RNA1310_11295.1} {RNA815_14627} | |
| 2. | MligTC455_23509 | 171 | 3.57 | Mlig455_050440 | Neo: - Age: - |
0.983 | - | - | - | - | - | 0.983 | Mlig455_050440 {REF} {Length: 4626} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.2]} {RNA1509_25100, RNA1509_54444} {RNA1310_6777.1, RNA1509_25100, RNA1509_54444} {RNA1509_25100, RNA1509_54444, RNA815_15707} | |
| 3. | MligTC455_15209 | 56 | 1.17 | Mlig455_026780 | Neo: - Age: - |
0.974 | - | - | - | - | 0.974 | - | Mlig455_026780 {REF} {Length: 944} {TRANSSPLICED} {Pfam: Lysine methyltransferase [PF10294.11, score=53.8]; Methyltransferase domain [PF13649.8, score=25.5]; Methyltransferase small domain [PF05175.16, score=20.0]} {Mouse: ENSMUSG00000041396, Mettl18, methyltransferase like 18, [Score=52.0, Expect=2e-07]} {Dmel: FBgn0038396, CG5013, [RH, Score=68.9, Expect=1e-13]} {Celegans: WBGene00011144, R08D7.4, [Score=53.1, Expect=6e-08]} {Smed: dd_Smed_v6_26966_0_1, dd_Smed_v6_26966_0_1, [RH, Score=65.1, Expect=1e-12]} {RNA1310_31723.1} {RNA815_17464} | |
| 4. | MligTC455_28097 | 225 | 4.68 | Mlig455_002686 | Neo: - Age: logFC(26M/2M)=0.886 |
PDZRN4 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_002686 {REF} {Length: 4651} {Pfam: PDZ domain [PF00595.26, score=58.3]; PDZ domain [PF17820.3, score=44.7]; PDZ domain [PF13180.8, score=25.9]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [Score=94.0, Expect=2e-19]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [Score=89.7, Expect=2e-18]} {Dmel: FBgn0024728, Slip1, [Score=60.8, Expect=2e-09]} {Celegans: WBGene00016846, C50F7.6, [Score=69.7, Expect=9e-13]} {Smed: dd_Smed_v6_14596_0_1, dd_Smed_v6_14596_0_1, [Score=120, Expect=3e-29]} {RNA1509_34490} {RNA1310_18731, RNA1509_34490} {RNA1509_34490, RNA815_18065} |
| 5. | MligTC455_11233 | 14 | 0.29 | Mlig455_027769 | Neo: Int S/G2/M Age: Up-Down-Down |
0.963 | - | - | 0.963 | - | - | - | Mlig455_027769 {REF} {Length: 880} {NoTransDecoderORF} {RNA1509_22816} {RNA1310_44682} {RNA815_26712} | |
| 6. | MligTC455_18440 | 34 | 0.72 | Mlig455_020380 | Neo: - |
0.963 | - | - | 0.963 | - | - | - | Mlig455_020380 {REF} {Length: 1793} {Pfam: N-terminal domain on NACHT_NTPase and P-loop NTPases [PF17107.7, score=19.3]} {RNA1310_98420.1} {RNA815_27771} | |
| 7. | MligTC455_25069 | 145 | 3.01 | Mlig455_003062 | Neo: - Age: Up-Down-Down |
DDX11 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_003062 {REF} {Length: 3996} {Pfam: Helicase C-terminal domain [PF13307.8, score=176.5]; DEAD_2 [PF06733.17, score=134.1]; Type III restriction enzyme, res subunit [PF04851.17, score=20.5]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [Score=305, Expect=3e-88]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=312, Expect=8e-91]} {Dmel: FBgn0026876, CG11403, [RH, Score=253, Expect=3e-70]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=241, Expect=2e-66]} {Smed: dd_Smed_v6_19858_0_1, dd_Smed_v6_19858_0_1, [RH, Score=231, Expect=2e-64]} {RNA1509_47246} {RNA1310_4495} {RNA815_4148} |
| 8. | MligTC455_20775 | 102 | 2.12 | Mlig455_028869 | Neo: Irradiation Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_028869 {REF} {Length: 2646} {TRANSSPLICED} {Pfam: Nuf2 family [PF03800.16, score=19.4]} {RNA1509_42670} {RNA1310_22763.1} {RNA815_14177} |
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