Data search
Results for MligTC455_23509
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23509 | 171 | 3.57 | Mlig455_050440 | Neo: - Age: - |
Mlig455_050440 {REF} {Length: 4626} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.2]} {RNA1509_25100, RNA1509_54444} {RNA1310_6777.1, RNA1509_25100, RNA1509_54444} {RNA1509_25100, RNA1509_54444, RNA815_15707} |
Cumulative graph for MligTC455_23509
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.665 | 2.52 | 0.09907 | 0.66543 | |
| RegionR2 | -1.916 | 2.52 | 0.05077 | 0.26903 | |
| RegionR3 | -0.936 | 2.52 | 0.20524 | 0.74519 | |
| RegionR4 | 0.35 | 2.52 | 0.66508 | 0.96339 | |
| RegionR5 | 0.708 | 2.52 | 0.23060 | 0.53727 | |
| RegionR6 | -0.294 | 2.52 | 0.67963 | 1.00000 | |
| RegionR7 | -1.908 | 2.52 | 0.13389 | 0.68822 | |
| RegionR8 | 1.33 | 2.52 | 0.22664 | 0.83700 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.631 | 2.52 | 0.03610 | 0.64988 | |
| RegenerationR2 | 0.241 | 2.52 | 0.77663 | 0.98228 | |
| RegenerationR3 | -0.338 | 2.52 | 0.68597 | 0.94220 | |
| RegenerationR4 | -1.182 | 2.52 | 0.12637 | 0.54040 | |
| RegenerationR5 | -1.105 | 2.52 | 0.11621 | 0.51260 | |
| RegenerationR6 | -1.521 | 2.52 | 0.07887 | 0.35044 | |
| RegenerationBL | -1.984 | 2.52 | 0.13563 | 0.43860 | |
| RegenerationTP | -1.778 | 2.52 | 0.21387 | 0.65648 |
Genes with expression patterns similar to MligTC455_23509
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23509 | 171 | 3.57 | Mlig455_050440 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050440 {REF} {Length: 4626} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.2]} {RNA1509_25100, RNA1509_54444} {RNA1310_6777.1, RNA1509_25100, RNA1509_54444} {RNA1509_25100, RNA1509_54444, RNA815_15707} | |
| 2. | MligTC455_51323 | 114 | 2.37 | Mlig455_036899 | Neo: - Age: - Region-enriched R5: 2.522/0.00479 |
0.983 | - | - | - | - | - | 0.983 | Mlig455_036899 {REF} {Length: 2524} {TRANSSPLICED} {Pfam: Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 8 [PF15299.8, score=18.6]} {RNA1310_11295.1} {RNA815_14627} | |
| 3. | MligTC455_28097 | 225 | 4.68 | Mlig455_002686 | Neo: - Age: logFC(26M/2M)=0.886 |
PDZRN4 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_002686 {REF} {Length: 4651} {Pfam: PDZ domain [PF00595.26, score=58.3]; PDZ domain [PF17820.3, score=44.7]; PDZ domain [PF13180.8, score=25.9]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [Score=94.0, Expect=2e-19]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [Score=89.7, Expect=2e-18]} {Dmel: FBgn0024728, Slip1, [Score=60.8, Expect=2e-09]} {Celegans: WBGene00016846, C50F7.6, [Score=69.7, Expect=9e-13]} {Smed: dd_Smed_v6_14596_0_1, dd_Smed_v6_14596_0_1, [Score=120, Expect=3e-29]} {RNA1509_34490} {RNA1310_18731, RNA1509_34490} {RNA1509_34490, RNA815_18065} |
| 4. | MligTC455_36605 | 27369 | 570.18 | Mlig455_009517 | Neo: Int S/G2/M |
RPS4X | 0.962 | - | - | - | 0.962 | - | - | Mlig455_009517 {REF} {Length: 1028} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_1299, RNA1509_5828} {RNA1310_34304, RNA1509_1299, RNA1509_5828} {RNA1509_1299, RNA1509_5828, RNA815_15889.1} |
| 5. | MligTC455_47723 | 247 | 5.15 | Mlig455_030923 | Neo: - Age: - |
SLC18B1 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_030923 {REF} {Length: 2647} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=108.2]} {Human: ENSG00000146409, SLC18B1, solute carrier family 18 member B1, [Score=62.0, Expect=3e-10]} {Mouse: ENSMUSG00000037455, Slc18b1, solute carrier family 18, subfamily B, member 1, [Score=63.9, Expect=6e-11]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=82.4, Expect=2e-17]} {RNA1509_46153} {RNA1310_8118, RNA1509_46153} {RNA1509_46153, RNA815_3189} |
| 6. | MligTC455_28951 | 110 | 2.29 | Mlig455_009318 | Neo: - Age: - Region-enriched R4: 5.376/0.00267 |
0.959 | - | - | 0.959 | - | - | - | Mlig455_009318 {REF} {Length: 1641} {RNA1509_47002} {RNA1310_19138.2} {RNA815_12715.1} | |
| 7. | MligTC455_21241 | 227 | 4.72 | Mlig455_003951, Mlig455_003971, Mlig455_003981 | Neo: - Age: Up-Down-Up Region-enriched R6: 3.398/0.00277 |
FANK1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_003951 {REF} {Length: 6669} {TRANSSPLICED} {Pfam: Mab-21 protein [PF03281.16, score=39.8]; Ankyrin repeats (3 copies) [PF12796.9, score=37.0]; Ankyrin repeats (many copies) [PF13637.8, score=26.4]; Ankyrin repeats (many copies) [PF13857.8, score=25.7]; Ankyrin repeat [PF13606.8, score=22.1]; Ankyrin repeat [PF00023.32, score=22.0]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=53.5, Expect=5e-07]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=52.4, Expect=5e-07]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=48.1, Expect=9e-06]} {RNA1509_26473} {RNA1310_2004} {RNA815_1357.1} Mlig455_003971 {REF} {Length: 6673} {TRANSSPLICED} {Pfam: Mab-21 protein [PF03281.16, score=39.5]; Ankyrin repeats (3 copies) [PF12796.9, score=37.0]; Ankyrin repeats (many copies) [PF13637.8, score=27.4]; Ankyrin repeats (many copies) [PF13857.8, score=25.5]; Ankyrin repeat [PF00023.32, score=21.4]; Ankyrin repeat [PF13606.8, score=19.8]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=53.5, Expect=5e-07]; ENSG00000154065, ANKRD29, ankyrin repeat domain 29, [Score=52.4, Expect=5e-07]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=48.1, Expect=9e-06]} {RNA1509_26473} {RNA1310_2004} {RNA815_1357.1} Mlig455_003981 {REF} {Length: 4641} {TRANSSPLICED} {Pfam: Mab-21 protein [PF03281.16, score=41.5]; Ankyrin repeats (3 copies) [PF12796.9, score=40.3]; Ankyrin repeats (many copies) [PF13637.8, score=26.9]; Ankyrin repeat [PF00023.32, score=22.4]; Ankyrin repeats (many copies) [PF13857.8, score=20.6]; Ankyrin repeat [PF13606.8, score=19.7]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=53.5, Expect=4e-07]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=50.4, Expect=1e-05]} {Dmel: FBgn0264743, CG44001, [Score=47.8, Expect=1e-05]} {RNA1509_42419} {RNA1310_2004} {RNA815_1357.1} |
| 8. | MligTC455_46808 | 744 | 15.5 | Mlig455_002870 | Neo: - Age: - |
DPM3 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_002870 {REF} {Length: 1497} {TRANSSPLICED} {Pfam: Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) [PF08285.13, score=89.8]} {Human: ENSG00000179085, DPM3, dolichyl-phosphate mannosyltransferase subunit 3, [RH, Score=63.2, Expect=7e-14]} {Mouse: ENSMUSG00000042737, Dpm3, dolichyl-phosphate mannosyltransferase polypeptide 3, [RH, Score=60.8, Expect=3e-13]} {Dmel: FBgn0053977, CG33977, [RH, Score=64.7, Expect=7e-15]} {Smed: dd_Smed_v6_2396_0_1, dd_Smed_v6_2396_0_1, [RH, Score=79.0, Expect=1e-20]} {RNA1509_26430, RNA1509_30752, RNA1509_51954, RNA1509_9616} {RNA1310_46442.1, RNA1509_26430, RNA1509_30752, RNA1509_51954, RNA1509_9616} {RNA1509_26430, RNA1509_30752, RNA1509_51954, RNA1509_9616, RNA815_7334.1} |
| 9. | MligTC455_20775 | 102 | 2.12 | Mlig455_028869 | Neo: Irradiation Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_028869 {REF} {Length: 2646} {TRANSSPLICED} {Pfam: Nuf2 family [PF03800.16, score=19.4]} {RNA1509_42670} {RNA1310_22763.1} {RNA815_14177} | |
| 10. | MligTC455_20969 | 535 | 11.14 | Mlig455_027331, Mlig455_027333 | Neo: - Age: - |
PRR9 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_027331 {REF} {Length: 4284} {TRANSSPLICED} {Pfam: Cysteine rich repeat [PF02363.21, score=27.6]} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=2e-06]} {Mouse: ENSMUSG00000056270, Prr9, proline rich 9, [Score=44.3, Expect=7e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=63.9, Expect=5e-12]} {RNA1509_47591} {RNA1310_23668} {RNA815_11312} Mlig455_027333 {REF} {Length: 3355} {TRANSSPLICED} {Pfam: Asx homology domain [PF13919.8, score=48.2]; F-box-like [PF12937.9, score=27.8]; F-box domain [PF00646.35, score=26.4]} {RNA1509_47591} {RNA1310_23668} {RNA815_11312} |