Data search
Results for MligTC455_20971
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_20971 | 998 | 20.79 | Mlig455_059885 | Neo: Int S/G2/M |
DDX55 | Mlig455_059885 {REF} {Length: 1968} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=125.2]; Helicase conserved C-terminal domain [PF00271.33, score=68.0]; Domain of unknown function (DUF4217) [PF13959.8, score=61.3]; Type III restriction enzyme, res subunit [PF04851.17, score=20.9]} {Human: ENSG00000111364, DDX55, DEAD-box helicase 55, [RH, Score=453, Expect=8e-153]} {Mouse: ENSMUSG00000029389, Ddx55, DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, [RH, Score=465, Expect=1e-157]} {Dmel: FBgn0037561, CG9630, [RH, Score=412, Expect=5e-137]} {Celegans: WBGene00013983, ZK512.2, Probable ATP-dependent RNA helicase DDX55 homolog, [RH, Score=282, Expect=2e-87]} {Smed: dd_Smed_v6_7797_0_1, dd_Smed_v6_7797_0_1, [RH, Score=331, Expect=1e-106]} {RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1310_2745.1, RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1509_14720, RNA1509_16917, RNA1509_27410, RNA815_5402} |
Cumulative graph for MligTC455_20971
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.226 | 4.61 | 0.84332 | 1.00000 | |
| RegionR2 | -0.457 | 4.61 | 0.32501 | 0.71717 | |
| RegionR3 | -0.488 | 4.61 | 0.21319 | 0.75398 | |
| RegionR4 | 0.547 | 4.61 | 0.17842 | 0.44717 | |
| RegionR5 | 0.376 | 4.61 | 0.24603 | 0.55968 | |
| RegionR6 | -0.162 | 4.61 | 0.67606 | 1.00000 | |
| RegionR7 | 0.114 | 4.61 | 0.82967 | 1.00000 | |
| RegionR8 | -0.157 | 4.61 | 0.83424 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.824 | 4.61 | 0.59070 | 1.00000 | |
| RegenerationR2 | 0.735 | 4.61 | 0.03800 | 0.32162 | |
| RegenerationR3 | 1.086 | 4.61 | 0.00642 | 0.14509 | |
| RegenerationR4 | 0.364 | 4.61 | 0.33603 | 0.76953 | |
| RegenerationR5 | 0.73 | 4.61 | 0.03209 | 0.29905 | |
| RegenerationR6 | 0.723 | 4.61 | 0.06604 | 0.32247 | |
| RegenerationBL | 1.076 | 4.61 | 0.01610 | 0.13434 | |
| RegenerationTP | 0.458 | 4.61 | 0.41200 | 0.83839 |
Genes with expression patterns similar to MligTC455_20971
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_20971 | 998 | 20.79 | Mlig455_059885 | Neo: Int S/G2/M |
DDX55 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_059885 {REF} {Length: 1968} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=125.2]; Helicase conserved C-terminal domain [PF00271.33, score=68.0]; Domain of unknown function (DUF4217) [PF13959.8, score=61.3]; Type III restriction enzyme, res subunit [PF04851.17, score=20.9]} {Human: ENSG00000111364, DDX55, DEAD-box helicase 55, [RH, Score=453, Expect=8e-153]} {Mouse: ENSMUSG00000029389, Ddx55, DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, [RH, Score=465, Expect=1e-157]} {Dmel: FBgn0037561, CG9630, [RH, Score=412, Expect=5e-137]} {Celegans: WBGene00013983, ZK512.2, Probable ATP-dependent RNA helicase DDX55 homolog, [RH, Score=282, Expect=2e-87]} {Smed: dd_Smed_v6_7797_0_1, dd_Smed_v6_7797_0_1, [RH, Score=331, Expect=1e-106]} {RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1310_2745.1, RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1509_14720, RNA1509_16917, RNA1509_27410, RNA815_5402} |
| 2. | MligTC455_45670 | 1130 | 23.53 | Mlig455_020255 | Neo: Int S/G2/M Age: - |
PITRM1 | 1.774 | - | - | - | 0.968 | 0.806 | - | Mlig455_020255 {REF} {Length: 3336} {TRANSSPLICED} {Pfam: Peptidase M16C associated [PF08367.13, score=163.4]; Peptidase M16 inactive domain [PF05193.23, score=64.2]; Insulinase (Peptidase family M16) [PF00675.22, score=27.8]} {Human: ENSG00000107959, PITRM1, pitrilysin metallopeptidase 1, [RH, Score=637, Expect=0.0]} {Mouse: ENSMUSG00000021193, Pitrm1, pitrilysin metallepetidase 1, [RH, Score=655, Expect=0.0]} {Dmel: FBgn0033005, CG3107, [RH, Score=579, Expect=0.0]} {Celegans: WBGene00015481, C05D11.1, [RH, Score=73.6, Expect=5e-13]} {Smed: dd_Smed_v6_5873_0_1, dd_Smed_v6_5873_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_5076} {RNA1310_3817, RNA1509_5076} {RNA1509_5076, RNA815_27149} |
| 3. | MligTC455_52130 | 509 | 10.61 | Mlig455_007249 | Neo: Irradiation Age: - |
KRI1 | 1.686 | - | - | - | 0.952 | 0.734 | - | Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251} |
| 4. | MligTC455_43936 | 1101 | 22.94 | Mlig455_061698, Mlig455_063087 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.462 Region-enriched R5: 2.379/0.00000 |
1.681 | - | - | - | 0.724 | 0.957 | - | Mlig455_061698 {REF} {Length: 2311} {TRANSSPLICED} {RNA1509_44862, RNA1509_7216} {RNA1310_10758.1, RNA1509_44862} {RNA1509_44862, RNA815_5923} Mlig455_063087 {REF} {Length: 2275} {TRANSSPLICED} {RNA1509_7216} {RNA1310_10758.1} {RNA815_5923} |
|
| 5. | MligTC455_41696 | 1014 | 21.13 | Mlig455_009697, Mlig455_063047 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.062/0.00152 |
SDR39U1 | 1.671 | - | - | - | 0.712 | 0.959 | - | Mlig455_009697 {REF} {Length: 1979} {TRANSSPLICED} {Pfam: Ham1 family [PF01725.18, score=149.4]; Domain of unknown function (DUF1731) [PF08338.13, score=51.7]; NAD dependent epimerase/dehydratase family [PF01370.23, score=28.6]} {Human: ENSG00000100445, SDR39U1, short chain dehydrogenase/reductase family 39U member 1, [RH, Score=189, Expect=1e-55]} {Mouse: ENSMUSG00000022223, Sdr39u1, short chain dehydrogenase/reductase family 39U, member 1, [RH, Score=191, Expect=1e-56]} {Dmel: FBgn0031663, CG8891, [Score=167, Expect=8e-49]} {Celegans: WBGene00001823, hap-1, Inosine triphosphate pyrophosphatase, [Score=195, Expect=1e-59]} {Smed: dd_Smed_v6_3863_0_1, dd_Smed_v6_3863_0_1, [RH, Score=196, Expect=1e-58]} {RNA1509_16167} {RNA1310_22953.1} {RNA815_33247.1} Mlig455_063047 {REF} {Length: 1418} {TRANSSPLICED} {Pfam: Ham1 family [PF01725.18, score=149.4]; Domain of unknown function (DUF1731) [PF08338.13, score=51.7]; NAD dependent epimerase/dehydratase family [PF01370.23, score=28.6]} {Human: ENSG00000100445, SDR39U1, short chain dehydrogenase/reductase family 39U member 1, [RH, Score=189, Expect=1e-55]} {Mouse: ENSMUSG00000022223, Sdr39u1, short chain dehydrogenase/reductase family 39U, member 1, [RH, Score=191, Expect=1e-56]} {Dmel: FBgn0031663, CG8891, [Score=167, Expect=8e-49]} {Celegans: WBGene00001823, hap-1, Inosine triphosphate pyrophosphatase, [Score=195, Expect=1e-59]} {Smed: dd_Smed_v6_3863_0_1, dd_Smed_v6_3863_0_1, [RH, Score=196, Expect=1e-58]} {RNA1310_22953.2} {RNA815_33247.2} |
| 6. | MligTC455_33505 | 489 | 10.19 | Mlig455_057519 | Neo: Irradiation Age: - |
XAB2 | 0.971 | - | - | - | 0.971 | - | - | Mlig455_057519 {REF} {Length: 3105} {Pfam: Tetratricopeptide repeat [PF13428.8, score=64.4]; Tetratricopeptide repeat [PF14559.8, score=40.5]; Suppressor of forked protein (Suf) [PF05843.16, score=38.4]; Tetratricopeptide repeat [PF13429.8, score=38.2]; Tetratricopeptide repeat [PF07719.19, score=33.6]; Tetratricopeptide repeat [PF13424.8, score=27.5]; NRDE-2, necessary for RNA interference [PF08424.12, score=22.1]; Mad3/BUB1 homology region 1 [PF08311.14, score=21.3]} {Human: ENSG00000076924, XAB2, XPA binding protein 2, [RH, Score=873, Expect=0.0]} {Mouse: ENSMUSG00000019470, Xab2, XPA binding protein 2, [RH, Score=873, Expect=0.0]} {Dmel: FBgn0033859, fand, fandango, [RH, Score=868, Expect=0.0]} {Celegans: WBGene00016837, syf-1, [RH, Score=758, Expect=0.0]} {Smed: dd_Smed_v6_6473_0_1, dd_Smed_v6_6473_0_1, [RH, Score=712, Expect=0.0]} {RNA1509_33245, RNA1509_5006, RNA1509_55462} {RNA1310_2111.2, RNA1509_33245, RNA1509_55462} {RNA1509_33245, RNA1509_55462, RNA815_1651.1} |
| 7. | MligTC455_15553 | 1843 | 38.4 | Mlig455_031390 | Neo: - Age: logFC(26M/2M)=0.339 |
DDX54 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_031390 {REF} {Length: 2554} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=164.3]; Helicase conserved C-terminal domain [PF00271.33, score=76.9]; Type III restriction enzyme, res subunit [PF04851.17, score=21.3]} {Human: ENSG00000123064, DDX54, DEAD-box helicase 54, [RH, Score=541, Expect=0.0]} {Mouse: ENSMUSG00000029599, Ddx54, DEAD (Asp-Glu-Ala-Asp) box polypeptide 54, [RH, Score=525, Expect=3e-176]} {Dmel: FBgn0052344, CG32344, [RH, Score=459, Expect=3e-151]} {Celegans: WBGene00022378, Y94H6A.5, [RH, Score=493, Expect=9e-165]} {Smed: dd_Smed_v6_3250_0_1, dd_Smed_v6_3250_0_1, [RH, Score=438, Expect=2e-144]} {RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1310_6518, RNA1509_10326, RNA1509_41254, RNA1509_4494} {RNA1509_10326, RNA1509_41254, RNA1509_4494, RNA815_7893} |
| 8. | MligTC455_44121 | 492 | 10.25 | Mlig455_070864 | Neo: - Age: - |
RSF1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_070864 {REF} {Length: 6357} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.2]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=122, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=9e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=51.2, Expect=7e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=179, Expect=2e-45]} {RNA1509_8090} {RNA1310_1065.1} {RNA815_778.1} |
| 9. | MligTC455_16741 | 471 | 9.8 | Mlig455_064961 | Neo: - Age: - Region-enriched R5: 1.080/0.00696 |
NF2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_064961 {REF} {Length: 2815} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=50.8]; FERM N-terminal domain [PF09379.12, score=46.2]; FERM central domain [PF00373.20, score=33.2]; Ezrin/radixin/moesin family [PF00769.21, score=30.2]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=248, Expect=2e-73]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=250, Expect=2e-74]} {Dmel: FBgn0086384, Mer, Merlin, [Score=259, Expect=2e-77]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_1131_0_1, dd_Smed_v6_1131_0_1, [Score=206, Expect=9e-59]} {RNA1509_28763, RNA1509_43567} {RNA1310_9789, RNA1509_28763, RNA1509_43567} {RNA1509_28763, RNA1509_43567, RNA815_21216} |
| 10. | MligTC455_51827 | 2868 | 59.75 | Mlig455_017594, Mlig455_058811 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.028/0.00020 |
POLR1C | 0.952 | - | - | - | 0.952 | - | - | Mlig455_017594 {REF} {Length: 4616} {Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=74.9]; RNA polymerase Rpb3/RpoA insert domain [PF01000.28, score=44.7]} {Human: ENSG00000171453, POLR1C, RNA polymerase I and III subunit C, [Score=213, Expect=2e-66]} {Mouse: ENSMUSG00000067148, Polr1c, polymerase (RNA) I polypeptide C, [Score=204, Expect=4e-63]} {Dmel: FBgn0031657, CG3756, [Score=197, Expect=8e-61]} {Celegans: WBGene00019275, rpac-40, RNA Polymerase I/III (A/C) shared subunit, [Score=210, Expect=1e-65]} {Smed: dd_Smed_v6_5608_0_5, dd_Smed_v6_5608_0_5, [Score=98.6, Expect=6e-23]} {RNA1509_8571} {RNA1310_29398} {RNA815_14725} Mlig455_058811 {REF} {Length: 1089} {TRANSSPLICED} {Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=75.0]; RNA polymerase Rpb3/RpoA insert domain [PF01000.28, score=71.6]} {Human: ENSG00000171453, POLR1C, RNA polymerase I and III subunit C, [RH, Score=257, Expect=1e-83]} {Mouse: ENSMUSG00000067148, Polr1c, polymerase (RNA) I polypeptide C, [RH, Score=248, Expect=2e-80]} {Dmel: FBgn0031657, CG3756, [RH, Score=238, Expect=1e-76]} {Celegans: WBGene00019275, rpac-40, RNA Polymerase I/III (A/C) shared subunit, [RH, Score=250, Expect=3e-81]} {Smed: dd_Smed_v6_5608_0_1, dd_Smed_v6_5608_0_1, [RH, Score=132, Expect=5e-35]} {RNA1509_8571} {RNA1310_29398, RNA1509_8571} {RNA1509_8571, RNA815_14725} |
| 11. | MligTC455_46021 | 761 | 15.85 | Mlig455_055618 | Neo: - Age: - |
RRP8 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_055618 {REF} {Length: 1027} {TRANSSPLICED} {Pfam: Hypothetical methyltransferase [PF05148.17, score=190.3]; Methyltransferase domain [PF08241.14, score=19.8]} {Human: ENSG00000132275, RRP8, ribosomal RNA processing 8, [Score=164, Expect=1e-46]} {Mouse: ENSMUSG00000030888, Rrp8, ribosomal RNA processing 8, methyltransferase, homolog (yeast), [Score=167, Expect=5e-48]} {Dmel: FBgn0034422, CG7137, [Score=147, Expect=1e-41]} {Celegans: WBGene00020296, T07A9.8, Ribosomal RNA-processing protein 8, [RH, Score=168, Expect=1e-49]} {Smed: dd_Smed_v6_11164_0_1, dd_Smed_v6_11164_0_1, [Score=143, Expect=5e-41]} {RNA1509_24023} {RNA1310_32382} {RNA815_14841} |
| 12. | MligTC455_40974 | 1363 | 28.4 | Mlig455_019489 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.723 Regeneration-enriched BL: 1.836 |
HNRNPA2B1 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_019489 {REF} {Length: 2430} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=122.9]; RNA recognition motif [PF16367.7, score=43.7]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=202, Expect=7e-62]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=192, Expect=8e-59]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=202, Expect=1e-62]} {Dmel: FBgn0004903, Rb97D, Ribonuclear protein at 97D, [Score=196, Expect=1e-58]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=199, Expect=4e-61]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=243, Expect=3e-79]} {RNA1509_21450, RNA1509_23782, RNA1509_41048} {RNA1310_6454, RNA1509_23782, RNA1509_41048} {RNA1509_23782, RNA1509_41048, RNA815_8384.1} |
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