Data search
Results for MligTC455_52130
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52130 | 509 | 10.61 | Mlig455_007249 | Neo: Irradiation Age: - |
KRI1 | Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251} |
Cumulative graph for MligTC455_52130
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.452 | 3.869 | 0.75897 | 1.00000 | |
| RegionR2 | -0.13 | 3.869 | 0.80983 | 1.00000 | |
| RegionR3 | -0.199 | 3.869 | 0.66100 | 1.00000 | |
| RegionR4 | 0.335 | 3.869 | 0.47710 | 0.80521 | |
| RegionR5 | 0.989 | 3.869 | 0.00447 | 0.03183 | |
| RegionR6 | 0.123 | 3.869 | 0.77694 | 1.00000 | |
| RegionR7 | 0.198 | 3.869 | 0.74479 | 1.00000 | |
| RegionR8 | -0.864 | 3.869 | 0.37212 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.412 | 3.869 | 0.84428 | 1.00000 | |
| RegenerationR2 | 0.423 | 3.869 | 0.25001 | 0.69665 | |
| RegenerationR3 | 0.611 | 3.869 | 0.14908 | 0.57808 | |
| RegenerationR4 | 0.378 | 3.869 | 0.36194 | 0.78819 | |
| RegenerationR5 | 0.181 | 3.869 | 0.59490 | 0.90814 | |
| RegenerationR6 | 0.536 | 3.869 | 0.19563 | 0.53544 | |
| RegenerationBL | 0.109 | 3.869 | 0.86006 | 1.00000 | |
| RegenerationTP | 0.342 | 3.869 | 0.63291 | 0.97928 |
Genes with expression patterns similar to MligTC455_52130
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52130 | 509 | 10.61 | Mlig455_007249 | Neo: Irradiation Age: - |
KRI1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007249 {REF} {Length: 2519} {TRANSSPLICED} {Pfam: KRI1-like family C-terminal [PF12936.9, score=77.0]; KRI1-like family [PF05178.14, score=60.1]} {Human: ENSG00000129347, KRI1, KRI1 homolog, [RH, Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000035047, Kri1, KRI1 homolog, [RH, Score=96.3, Expect=4e-20]} {Dmel: FBgn0036254, CG5645, [RH, Score=70.9, Expect=3e-12]} {Celegans: WBGene00010044, F54C9.9, [RH, Score=75.9, Expect=6e-14]} {Smed: dd_Smed_v6_8647_0_1, dd_Smed_v6_8647_0_1, [RH, Score=70.5, Expect=2e-12]} {RNA1509_9111} {RNA1310_8671.1} {RNA815_11251} |
| 2. | MligTC455_31129 | 1008 | 21 | Mlig455_005615, Mlig455_070184 | Neo: Irradiation Age: logFC(26M/2M)=0.545 Region-specific R5: 1.527 Region-enriched R5: 1.021/0.00725 |
LIG4 | 3.22 | 0.704 | - | - | 0.754 | 0.956 | 0.806 | Mlig455_005615 {REF} {Length: 3975} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=70.9]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.5]; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family [PF01248.28, score=57.1]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.4]; RNA ligase [PF09414.12, score=29.0]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.6]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [Score=546, Expect=2e-178]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [Score=541, Expect=7e-177]} {Dmel: FBgn0030506, Lig4, Ligase4, [Score=214, Expect=4e-57]} {Celegans: WBGene00002986, lig-4, LIGase, [RH, Score=127, Expect=1e-29]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [Score=504, Expect=6e-163]} {RNA1509_4940} {RNA1310_2815} {RNA815_3459} Mlig455_070184 {REF} {Length: 3787} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=124.6]; DNA ligase N terminus [PF04675.16, score=120.6]; ATP dependent DNA ligase C terminal region [PF04679.17, score=58.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=42.6]; RNA ligase [PF09414.12, score=29.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=28.1]} {Human: ENSG00000174405, LIG4, DNA ligase 4, [RH, Score=648, Expect=0.0]} {Mouse: ENSMUSG00000049717, Lig4, ligase IV, DNA, ATP-dependent, [RH, Score=643, Expect=0.0]} {Dmel: FBgn0030506, Lig4, Ligase4, [RH, Score=253, Expect=3e-70]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=134, Expect=7e-32]} {Smed: dd_Smed_v6_11363_0_1, dd_Smed_v6_11363_0_1, [RH, Score=566, Expect=0.0]} {RNA1509_4940} {RNA1310_2815, RNA1509_4940} {RNA1509_4940, RNA815_3459} |
| 3. | MligTC455_30306 | 147 | 3.06 | Mlig455_029651 | Neo: - Age: logFC(26M/2M)=-0.342 Region-enriched R5: 1.839/0.00256 |
CASP7 | 2.446 | 0.741 | - | - | - | 0.961 | 0.744 | Mlig455_029651 {REF} {Length: 4026} {Pfam: Caspase domain [PF00656.24, score=60.8]} {Human: ENSG00000165806, CASP7, caspase 7, [Score=83.6, Expect=1e-18]} {Mouse: ENSMUSG00000025076, Casp7, caspase 7, [Score=84.0, Expect=3e-19]; ENSMUSG00000027997, Casp6, caspase 6, [Score=80.1, Expect=6e-18]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=64.3, Expect=2e-12]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=55.8, Expect=2e-09]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [Score=80.9, Expect=1e-18]} {RNA1509_33490, RNA1509_44077} {RNA1310_23085, RNA1509_33490, RNA1509_44077} {RNA1509_33490, RNA1509_44077, RNA815_9619} |
| 4. | MligTC455_37268 | 546 | 11.37 | Mlig455_027676, Mlig455_047737 | Neo: - Age: Up-Down-Up |
1.807 | 0.843 | - | - | - | - | 0.964 | Mlig455_027676 {REF} {Length: 2407} {TRANSSPLICED} {RNA1509_14326} {RNA1310_18383, RNA1509_14326} {RNA1509_14326, RNA815_12483.1} Mlig455_047737 {REF} {Length: 2406} {TRANSSPLICED} {RNA1509_14326, RNA1509_58667} {RNA1310_18383, RNA1509_58667} {RNA1509_58667, RNA815_12483.1} |
|
| 5. | MligTC455_44784 | 318 | 6.63 | Mlig455_053700 | Neo: - Age: - |
MKRN1 | 1.805 | - | - | - | 0.828 | 0.977 | - | Mlig455_053700 {REF} {Length: 2828} {TRANSSPLICED} {Pfam: Torus domain [PF16131.7, score=53.0]; CHY zinc finger [PF05495.14, score=51.1]; Zinc finger domain [PF18345.3, score=49.0]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=44.5]; CCCH-type zinc finger [PF18044.3, score=34.5]; Zinc-finger containing family [PF15663.7, score=19.6]} {Human: ENSG00000133606, MKRN1, makorin ring finger protein 1, [RH, Score=47.0, Expect=5e-06]} {Mouse: ENSMUSG00000029922, Mkrn1, makorin, ring finger protein, 1, [Score=47.8, Expect=8e-06]} {RNA1509_13070} {RNA1310_6209} {RNA815_10322} |
| 6. | MligTC455_42888 | 324 | 6.74 | Mlig455_023771 | Neo: Irradiation Age: - Region-enriched R5: 1.824/0.00004 |
PTPMT1 | 1.707 | - | - | 0.960 | - | - | 0.747 | Mlig455_023771 {REF} {Length: 883} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=55.4]; Protein-tyrosine phosphatase [PF00102.29, score=21.0]} {Human: ENSG00000110536, PTPMT1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=101, Expect=1e-26]; ENSG00000285206, PTPMT1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=101, Expect=1e-26]} {Mouse: ENSMUSG00000110860, Ptpmt1, protein tyrosine phosphatase, mitochondrial 1, [RH, Score=95.9, Expect=5e-24]} {Dmel: FBgn0039111, PTPMT1, Protein tyrosine phosphatase, mitochondrial 1, [RH, Score=114, Expect=5e-32]} {Celegans: WBGene00009207, F28C6.8, [RH, Score=103, Expect=8e-28]} {Smed: dd_Smed_v6_6276_0_2, dd_Smed_v6_6276_0_2, [RH, Score=99.4, Expect=2e-26]} {RNA1509_35905, RNA1509_45090} {RNA1310_38858, RNA1509_35905, RNA1509_45090} {RNA1509_35905, RNA1509_45090, RNA815_25279} |
| 7. | MligTC455_20971 | 998 | 20.79 | Mlig455_059885 | Neo: Int S/G2/M |
DDX55 | 1.686 | - | - | - | 0.952 | 0.734 | - | Mlig455_059885 {REF} {Length: 1968} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=125.2]; Helicase conserved C-terminal domain [PF00271.33, score=68.0]; Domain of unknown function (DUF4217) [PF13959.8, score=61.3]; Type III restriction enzyme, res subunit [PF04851.17, score=20.9]} {Human: ENSG00000111364, DDX55, DEAD-box helicase 55, [RH, Score=453, Expect=8e-153]} {Mouse: ENSMUSG00000029389, Ddx55, DEAD (Asp-Glu-Ala-Asp) box polypeptide 55, [RH, Score=465, Expect=1e-157]} {Dmel: FBgn0037561, CG9630, [RH, Score=412, Expect=5e-137]} {Celegans: WBGene00013983, ZK512.2, Probable ATP-dependent RNA helicase DDX55 homolog, [RH, Score=282, Expect=2e-87]} {Smed: dd_Smed_v6_7797_0_1, dd_Smed_v6_7797_0_1, [RH, Score=331, Expect=1e-106]} {RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1310_2745.1, RNA1509_14720, RNA1509_16917, RNA1509_27410} {RNA1509_14720, RNA1509_16917, RNA1509_27410, RNA815_5402} |
| 8. | MligTC455_18259 | 142 | 2.97 | Mlig455_050099 | Neo: - Age: Up-Down-Up |
WDR44 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_050099 {REF} {Length: 4771} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=36.1]} {Human: ENSG00000131725, WDR44, WD repeat domain 44, [Score=102, Expect=6e-22]} {Mouse: ENSMUSG00000036769, Wdr44, WD repeat domain 44, [Score=102, Expect=5e-22]} {Dmel: FBgn0083969, CG34133, [Score=92.8, Expect=4e-19]} {Celegans: WBGene00006369, sym-4, SYM-4, [Score=97.4, Expect=1e-20]} {Smed: dd_Smed_v6_6175_0_1, dd_Smed_v6_6175_0_1, [Score=139, Expect=3e-34]} {RNA1509_9649} {RNA1310_5900} {RNA815_7039} |
| 9. | MligTC455_33505 | 489 | 10.19 | Mlig455_057519 | Neo: Irradiation Age: - |
XAB2 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_057519 {REF} {Length: 3105} {Pfam: Tetratricopeptide repeat [PF13428.8, score=64.4]; Tetratricopeptide repeat [PF14559.8, score=40.5]; Suppressor of forked protein (Suf) [PF05843.16, score=38.4]; Tetratricopeptide repeat [PF13429.8, score=38.2]; Tetratricopeptide repeat [PF07719.19, score=33.6]; Tetratricopeptide repeat [PF13424.8, score=27.5]; NRDE-2, necessary for RNA interference [PF08424.12, score=22.1]; Mad3/BUB1 homology region 1 [PF08311.14, score=21.3]} {Human: ENSG00000076924, XAB2, XPA binding protein 2, [RH, Score=873, Expect=0.0]} {Mouse: ENSMUSG00000019470, Xab2, XPA binding protein 2, [RH, Score=873, Expect=0.0]} {Dmel: FBgn0033859, fand, fandango, [RH, Score=868, Expect=0.0]} {Celegans: WBGene00016837, syf-1, [RH, Score=758, Expect=0.0]} {Smed: dd_Smed_v6_6473_0_1, dd_Smed_v6_6473_0_1, [RH, Score=712, Expect=0.0]} {RNA1509_33245, RNA1509_5006, RNA1509_55462} {RNA1310_2111.2, RNA1509_33245, RNA1509_55462} {RNA1509_33245, RNA1509_55462, RNA815_1651.1} |
| 10. | MligTC455_29924 | 359 | 7.48 | Mlig455_041388 | Neo: - Age: - |
TRAPPC10 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_041388 {REF} {Length: 5701} {Human: ENSG00000160218, TRAPPC10, trafficking protein particle complex 10, [RH, Score=224, Expect=7e-59]} {Mouse: ENSMUSG00000000374, Trappc10, trafficking protein particle complex 10, [RH, Score=232, Expect=2e-61]} {Dmel: FBgn0038303, SIDL, Shal Interactor of Di-Leucine Motif, [RH, Score=171, Expect=7e-43]} {Smed: dd_Smed_v6_8662_0_2, dd_Smed_v6_8662_0_2, [RH, Score=196, Expect=9e-51]} {RNA1509_18412} {RNA1310_2459.1} {RNA815_6603} |
| 11. | MligTC455_16411 | 424 | 8.83 | Mlig455_060581 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_060581 {REF} {Length: 1656} {TRANSSPLICED} {RNA1509_40255, RNA1509_49687} {RNA1310_29185, RNA1509_40255, RNA1509_49687} {RNA1509_40255, RNA1509_49687, RNA815_14786} | |
| 12. | MligTC455_41808 | 221 | 4.6 | Mlig455_062501 | Neo: Irradiation Age: logFC(26M/2M)=0.280 |
0.957 | - | - | - | - | 0.957 | - | Mlig455_062501 {REF} {Length: 2756} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.7]} {Celegans: WBGene00009553, hinf-1, HIstone Nuclear Factor p (P) homolog, [Score=51.6, Expect=2e-06]} {RNA1509_17341} {RNA1310_16943} {RNA815_24677.1} | |
| 13. | MligTC455_29926 | 376 | 7.84 | Mlig455_069371 | Neo: - Age: Up-Down-Down |
0.954 | - | - | - | - | - | 0.954 | Mlig455_069371 {REF} {Length: 5617} {RNA1509_6537} {RNA1310_5792} {RNA815_1502} | |
| 14. | MligTC455_49772 | 518 | 10.79 | Mlig455_021411, Mlig455_067241 | Neo: - Age: - |
MLST8 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_021411 {REF} {Length: 2493} {Pfam: WD domain, G-beta repeat [PF00400.34, score=91.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.3]} {Human: ENSG00000167965, MLST8, MTOR associated protein, LST8 homolog, [RH, Score=313, Expect=1e-105]} {Mouse: ENSMUSG00000024142, Mlst8, MTOR associated protein, LST8 homolog (S. cerevisiae), [RH, Score=312, Expect=3e-105]} {Dmel: FBgn0264691, Lst8, [RH, Score=262, Expect=5e-86]} {Celegans: WBGene00015697, mlst-8, Mtor (MTOR) associated protein, LST8 homolog, [RH, Score=152, Expect=9e-43]} {Smed: dd_Smed_v6_3174_0_1, dd_Smed_v6_3174_0_1, [RH, Score=229, Expect=3e-73]} {RNA1509_24698} {RNA1310_32919} {RNA815_26675} Mlig455_067241 {REF} {Length: 939} {Pfam: WD domain, G-beta repeat [PF00400.34, score=91.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.3]} {Human: ENSG00000167965, MLST8, MTOR associated protein, LST8 homolog, [RH, Score=313, Expect=1e-105]} {Mouse: ENSMUSG00000024142, Mlst8, MTOR associated protein, LST8 homolog (S. cerevisiae), [RH, Score=312, Expect=3e-105]} {Dmel: FBgn0264691, Lst8, [RH, Score=262, Expect=5e-86]} {Celegans: WBGene00015697, mlst-8, Mtor (MTOR) associated protein, LST8 homolog, [RH, Score=152, Expect=9e-43]} {Smed: dd_Smed_v6_3174_0_1, dd_Smed_v6_3174_0_1, [RH, Score=229, Expect=3e-73]} {RNA1310_84239.1} {RNA815_41296.1} |
| 15. | MligTC455_22104 | 54 | 1.12 | Mlig455_018878 | Neo: - Age: - |
RTL1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_018878 {REF} {Length: 3742} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.3]; Integrase core domain [PF00665.28, score=28.2]; Integrase core domain [PF13683.8, score=20.8]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=228, Expect=7e-66]} {RNA1509_36857} {RNA1310_23998} {RNA815_6067.1} |
| 16. | MligTC455_45274 | 60 | 1.26 | Mlig455_047931 | Neo: - Age: - Region-enriched R5: 2.784/0.04619 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_047931 {REF} {Length: 1006} {NoTransDecoderORF} {RNA1310_43124} {RNA815_22128} |
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