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Results for MligTC455_21028

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21028 477 9.95 Mlig455_040137

Neo: -

Age: logFC(26M/2M)=-0.333

 NOTCH2 Mlig455_040137 {REF} {Length: 3557} {Pfam: Calcium-binding EGF domain [PF07645.17, score=284.9]; EGF-like domain [PF00008.29, score=212.4]; Human growth factor-like EGF [PF12661.9, score=149.3]; EGF domain [PF12947.9, score=133.6]; Delta serrate ligand [PF01414.21, score=93.4]; EGF-like domain [PF07974.15, score=77.9]; Complement Clr-like EGF-like [PF12662.9, score=57.4]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=281, Expect=1e-78]; ENSG00000074181, NOTCH3, notch 3, [Score=280, Expect=2e-78]; ENSG00000235396, NOTCH4, notch 4, [Score=275, Expect=9e-77]; ENSG00000232339, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000206312, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000223355, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000204301, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000234876, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000148400, NOTCH1, notch 1, [Score=268, Expect=2e-74]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=272, Expect=7e-76]; ENSMUSG00000027878, Notch2, notch 2, [Score=271, Expect=1e-75]; ENSMUSG00000026923, Notch1, notch 1, [Score=270, Expect=5e-75]} {Dmel: FBgn0004647, N, Notch, [Score=286, Expect=1e-80]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=225, Expect=2e-60]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=223, Expect=3e-60]} {RNA1509_24587} {RNA1310_15735} {RNA815_2179.1}

Cumulative graph for MligTC455_21028

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -9.399 3.704 0.00078 0.09429
RegionR2 1.468 3.704 0.13449 0.45535
RegionR3 2.182 3.704 0.00417 0.08410
RegionR4 1.105 3.704 0.23120 0.52426
RegionR5 1.446 3.704 0.08006 0.26206
RegionR6 1.916 3.704 0.01690 0.22978
RegionR7 1.436 3.704 0.10300 0.61143
RegionR8 -0.154 3.704 0.89970 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.241 3.704 0.99999 1.00000
RegenerationR2 -2.666 3.704 0.00033 0.02423
RegenerationR3 -1.287 3.704 0.06323 0.42387
RegenerationR4 -0.662 3.704 0.34909 0.77976
RegenerationR5 -1.057 3.704 0.12379 0.52627
RegenerationR6 -1.322 3.704 0.06527 0.32090
RegenerationBL -1.804 3.704 0.02744 0.18360
RegenerationTP -1.214 3.704 0.15580 0.58360


Genes with expression patterns similar to MligTC455_21028

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21028 477 9.95 Mlig455_040137

Neo: -

Age: logFC(26M/2M)=-0.333

 NOTCH2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040137 {REF} {Length: 3557} {Pfam: Calcium-binding EGF domain [PF07645.17, score=284.9]; EGF-like domain [PF00008.29, score=212.4]; Human growth factor-like EGF [PF12661.9, score=149.3]; EGF domain [PF12947.9, score=133.6]; Delta serrate ligand [PF01414.21, score=93.4]; EGF-like domain [PF07974.15, score=77.9]; Complement Clr-like EGF-like [PF12662.9, score=57.4]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=281, Expect=1e-78]; ENSG00000074181, NOTCH3, notch 3, [Score=280, Expect=2e-78]; ENSG00000235396, NOTCH4, notch 4, [Score=275, Expect=9e-77]; ENSG00000232339, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000206312, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000223355, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000204301, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000234876, NOTCH4, notch 4, [Score=273, Expect=3e-76]; ENSG00000148400, NOTCH1, notch 1, [Score=268, Expect=2e-74]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=272, Expect=7e-76]; ENSMUSG00000027878, Notch2, notch 2, [Score=271, Expect=1e-75]; ENSMUSG00000026923, Notch1, notch 1, [Score=270, Expect=5e-75]} {Dmel: FBgn0004647, N, Notch, [Score=286, Expect=1e-80]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=225, Expect=2e-60]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=223, Expect=3e-60]} {RNA1509_24587} {RNA1310_15735} {RNA815_2179.1}
2. MligTC455_42459 156 3.24 Mlig455_057632

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.712

 1.77 - - - - 0.801 0.969 Mlig455_057632 {REF} {Length: 1303} {RNA1310_51585} {RNA815_30465}
3. MligTC455_19475 282 5.87 Mlig455_069236

Neo: -

Age: -

 SLC46A1 0.96 - - - - - 0.960 Mlig455_069236 {REF} {Length: 2839} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=49.1]} {Human: ENSG00000076351, SLC46A1, solute carrier family 46 member 1, [Score=132, Expect=5e-33]} {Mouse: ENSMUSG00000029650, Slc46a3, solute carrier family 46, member 3, [Score=144, Expect=5e-37]} {Dmel: FBgn0050344, CG30344, [RH, Score=79.7, Expect=2e-15]} {Celegans: WBGene00009582, F40F9.5, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_9814_0_1, dd_Smed_v6_9814_0_1, [RH, Score=185, Expect=2e-52]} {RNA1509_21682, RNA1509_38894, RNA1509_9873} {RNA1310_11871, RNA1509_21682, RNA1509_38894, RNA1509_9873} {RNA1509_21682, RNA1509_38894, RNA1509_9873, RNA815_3733}
4. MligTC455_51810 292 6.09 Mlig455_055914

Neo: -

Age: logFC(26M/2M)=0.322

 RAB29 0.957 - - - - - 0.957 Mlig455_055914 {REF} {Length: 1941} {Pfam: Ras family [PF00071.24, score=68.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.6]} {Human: ENSG00000117280, RAB29, RAB29, member RAS oncogene family, [RH, Score=123, Expect=3e-36]} {Mouse: ENSMUSG00000019832, Rab32, RAB32, member RAS oncogene family, [Score=127, Expect=9e-37]} {Dmel: FBgn0002567, Rab32, [Score=112, Expect=3e-31]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=106, Expect=4e-29]} {Smed: dd_Smed_v6_2915_0_1, dd_Smed_v6_2915_0_1, [Score=134, Expect=3e-40]} {RNA1509_54279} {RNA1310_15012} {RNA815_20567}
5. MligTC455_31570 248 5.17 Mlig455_000697, Mlig455_047593, Mlig455_059362, Mlig455_065574

Neo: -

Age: logFC(26M/2M)=0.819

Region-enriched R4: 4.389/0.00195

 0.954 - - - - - 0.954

Mlig455_000697 {REF} {Length: 896} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_24468.1} {RNA815_17487.1}

Mlig455_047593 {REF} {Length: 991} {RNA1509_6383} {RNA1310_24468.1} {RNA815_17487.1}

Mlig455_059362 {REF} {Length: 882} {TRANSSPLICED} {RNA1509_6383} {RNA1310_24468.1} {RNA815_17487.1}

Mlig455_065574 {REF} {Length: 897} {TRANSSPLICED} {RNA1509_6383} {RNA1310_24468.1} {RNA815_17487.1}
6. MligTC455_40184 660 13.74 Mlig455_004167, Mlig455_004192

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.655

 0.951 - - - - - 0.951

Mlig455_004167 {REF} {Length: 1157} {RNA1509_29172, RNA1509_51059} {RNA1310_10204, RNA1509_29172, RNA1509_51059} {RNA1509_29172, RNA1509_51059, RNA815_19579}

Mlig455_004192 {REF} {Length: 887} {RNA1509_51059, RNA1509_60087} {RNA1310_10204, RNA1509_60087} {RNA1509_60087, RNA815_19579}
7. MligTC455_17461 113 2.36 Mlig455_003687

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_003687 {REF} {Length: 1115} {NoTransDecoderORF} {RNA1509_27979} {RNA1310_21032.1} {RNA815_18608}
8. MligTC455_50094 148 3.09 Mlig455_042020

Neo: Irradiation

Age: -

Region-enriched R4: 2.698/0.01391

 RNF216 0.95 - - - - - 0.950 Mlig455_042020 {REF} {Length: 2245} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=27.5]; FtsX extracellular domain [PF18075.3, score=19.7]} {Human: ENSG00000011275, RNF216, ring finger protein 216, [Score=174, Expect=5e-45]} {Mouse: ENSMUSG00000045078, Rnf216, ring finger protein 216, [Score=171, Expect=2e-44]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=60.1, Expect=4e-09]} {Celegans: WBGene00016157, C27A12.7, [Score=67.0, Expect=2e-11]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_15865} {RNA1310_11127} {RNA815_4010.1}

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