Data search


search
Exact
Search

Results for MligTC455_33927

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_33927 430 8.95 Mlig455_067789

Neo: -

Age: logFC(26M/2M)=0.724

PPIL2 Mlig455_067789 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=170.4]; Rtf2 RING-finger [PF04641.14, score=24.8]} {Human: ENSG00000100023, PPIL2, peptidylprolyl isomerase like 2, [RH, Score=502, Expect=7e-174]} {Mouse: ENSMUSG00000022771, Ppil2, peptidylprolyl isomerase (cyclophilin)-like 2, [RH, Score=493, Expect=3e-170]} {Dmel: FBgn0034109, CG7747, [RH, Score=513, Expect=1e-178]} {Celegans: WBGene00000880, cyn-4, Peptidyl-prolyl cis-trans isomerase 4, [RH, Score=440, Expect=6e-150]} {Smed: dd_Smed_v6_4217_0_1, dd_Smed_v6_4217_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_37397, RNA1509_42813} {RNA1310_15337, RNA1509_37397, RNA1509_42813} {RNA1509_37397, RNA1509_42813, RNA815_4990}

Cumulative graph for MligTC455_33927

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.993 3.606 0.52628 1.00000
RegionR2 0.886 3.606 0.18363 0.53547
RegionR3 0.551 3.606 0.31915 0.85750
RegionR4 0.602 3.606 0.28890 0.59904
RegionR5 1.113 3.606 0.01982 0.09652
RegionR6 0.979 3.606 0.07676 0.51401
RegionR7 -1.433 3.606 0.13887 0.69824
RegionR8 -1.704 3.606 0.16991 0.74332

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.66 3.606 0.28466 0.98374
RegenerationR2 0.613 3.606 0.18412 0.62669
RegenerationR3 0.558 3.606 0.30664 0.73749
RegenerationR4 0.806 3.606 0.13964 0.56143
RegenerationR5 0.376 3.606 0.42371 0.81380
RegenerationR6 0.672 3.606 0.20011 0.54067
RegenerationBL 2.149 3.606 0.00183 0.03405
RegenerationTP 1.605 3.606 0.10141 0.49473


Genes with expression patterns similar to MligTC455_33927

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_33927 430 8.95 Mlig455_067789

Neo: -

Age: logFC(26M/2M)=0.724

PPIL2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_067789 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=170.4]; Rtf2 RING-finger [PF04641.14, score=24.8]} {Human: ENSG00000100023, PPIL2, peptidylprolyl isomerase like 2, [RH, Score=502, Expect=7e-174]} {Mouse: ENSMUSG00000022771, Ppil2, peptidylprolyl isomerase (cyclophilin)-like 2, [RH, Score=493, Expect=3e-170]} {Dmel: FBgn0034109, CG7747, [RH, Score=513, Expect=1e-178]} {Celegans: WBGene00000880, cyn-4, Peptidyl-prolyl cis-trans isomerase 4, [RH, Score=440, Expect=6e-150]} {Smed: dd_Smed_v6_4217_0_1, dd_Smed_v6_4217_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_37397, RNA1509_42813} {RNA1310_15337, RNA1509_37397, RNA1509_42813} {RNA1509_37397, RNA1509_42813, RNA815_4990}
2. MligTC455_41037 1102 22.95 Mlig455_045799, Mlig455_063185

Neo: Neoblast

Age: -

NOP9 1.682 0.711 - - 0.971 - -

Mlig455_045799 {REF} {Length: 2155} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=35.3]} {Human: ENSG00000196943, NOP9, NOP9 nucleolar protein, [RH, Score=97.8, Expect=1e-20]; ENSG00000285326, NOP9, NOP9 nucleolar protein, [RH, Score=97.8, Expect=1e-20]} {Mouse: ENSMUSG00000019297, Nop9, NOP9 nucleolar protein, [RH, Score=72.0, Expect=1e-12]} {Dmel: FBgn0033169, CG11123, [Score=63.2, Expect=4e-10]} {RNA1509_27389} {RNA1310_6201} {RNA815_13451}

Mlig455_063185 {REF} {Length: 3027} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=35.3]} {Human: ENSG00000196943, NOP9, NOP9 nucleolar protein, [Score=93.2, Expect=4e-19]; ENSG00000285326, NOP9, NOP9 nucleolar protein, [Score=93.2, Expect=4e-19]} {Mouse: ENSMUSG00000019297, Nop9, NOP9 nucleolar protein, [Score=69.7, Expect=6e-12]} {Dmel: FBgn0033169, CG11123, [Score=66.2, Expect=6e-11]} {RNA1509_24855, RNA1509_27389} {RNA1310_6201, RNA1509_24855, RNA1509_27389} {RNA1509_24855, RNA1509_27389, RNA815_13451}
3. MligTC455_48745 566 11.79 Mlig455_033681, Mlig455_050139

Neo: -

Age: logFC(26M/2M)=0.794

Region-enriched R4: 2.158/0.03550

PPP1R10 0.967 - - - 0.967 - -

Mlig455_033681 {REF} {Length: 3326} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.5, Expect=9e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173, RNA1509_7573} {RNA1509_7573, RNA815_6778}

Mlig455_050139 {REF} {Length: 3325} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=33.1]} {Human: ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [Score=80.9, Expect=8e-15]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [Score=79.7, Expect=1e-14]} {Dmel: FBgn0053526, PNUTS, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [RH, Score=116, Expect=9e-27]} {RNA1509_7573} {RNA1310_4173} {RNA815_6778}
4. MligTC455_27375 76 1.58 Mlig455_041864

Neo: -

Age: -

GTPBP2 0.961 - - - 0.961 - - Mlig455_041864 {REF} {Length: 5786} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=77.0]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=22.4]} {Human: ENSG00000172432, GTPBP2, GTP binding protein 2, [Score=409, Expect=4e-134]} {Mouse: ENSMUSG00000023952, Gtpbp2, GTP binding protein 2, [Score=408, Expect=4e-134]} {Dmel: FBgn0037391, CG2017, [Score=361, Expect=5e-116]} {Celegans: WBGene00011449, T04H1.2, [RH, Score=347, Expect=5e-111]} {Smed: dd_Smed_v6_10435_0_1, dd_Smed_v6_10435_0_1, [RH, Score=330, Expect=1e-102]} {RNA1509_56423} {RNA1310_9075, RNA1509_56423} {RNA1509_56423, RNA815_7492}
5. MligTC455_48728 821 17.11 Mlig455_009571

Neo: -

Age: -

HIBADH 0.961 - - - - 0.961 - Mlig455_009571 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=150.4]; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase [PF14833.8, score=124.8]; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=26.8]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=26.5]; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=23.3]; Ornithine cyclodeaminase/mu-crystallin family [PF02423.17, score=18.9]; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.16, score=18.3]} {Human: ENSG00000106049, HIBADH, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=7e-99]} {Mouse: ENSMUSG00000029776, Hibadh, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=3e-99]} {Dmel: FBgn0034390, CG15093, [RH, Score=269, Expect=1e-88]} {Celegans: WBGene00007122, B0250.5, Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial, [RH, Score=238, Expect=6e-77]} {Smed: dd_Smed_v6_4710_0_1, dd_Smed_v6_4710_0_1, [RH, Score=305, Expect=5e-103]} {RNA1509_24430} {RNA1310_28382} {RNA815_13051}
6. MligTC455_21063 102 2.12 Mlig455_022767, Mlig455_037745, Mlig455_061950, Mlig455_069920

Neo: Int S/G2/M

Age: -

0.958 - - - 0.958 - -

Mlig455_022767 {REF} {Length: 1432} {RNA1509_51835} {RNA1310_99393} {RNA815_15908}

Mlig455_037745 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}

Mlig455_061950 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}

Mlig455_069920 {REF} {Length: 194} {NoTransDecoderORF} {RNA1509_34535} {RNA1310_86294.1} {RNA815_36906}
7. MligTC455_49954 789 16.44 Mlig455_032086

Neo: -

Age: -

ARHGAP17 0.958 - - - 0.958 - - Mlig455_032086 {REF} {Length: 4485} {Pfam: RhoGAP domain [PF00620.29, score=106.9]} {Human: ENSG00000140750, ARHGAP17, Rho GTPase activating protein 17, [RH, Score=153, Expect=2e-37]; ENSG00000006740, ARHGAP44, Rho GTPase activating protein 44, [RH, Score=152, Expect=2e-37]} {Mouse: ENSMUSG00000033389, Arhgap44, Rho GTPase activating protein 44, [RH, Score=156, Expect=6e-39]} {Dmel: FBgn0038747, RhoGAP92B, Rho GTPase activating protein at 92B, [Score=94.4, Expect=2e-19]} {Celegans: WBGene00020209, T04C9.1, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_10426_0_1, dd_Smed_v6_10426_0_1, [RH, Score=152, Expect=7e-38]} {RNA1509_8985} {RNA1310_5441} {RNA815_6114}
8. MligTC455_40870 1135 23.64 Mlig455_033953

Neo: Irradiation

Age: -

ZC3H14 0.95 - - - 0.950 - - Mlig455_033953 {REF} {Length: 3368} {Pfam: RNA-binding, Nab2-type zinc finger [PF14608.8, score=50.9]; PWI domain [PF01480.19, score=20.4]} {Human: ENSG00000100722, ZC3H14, zinc finger CCCH-type containing 14, [RH, Score=152, Expect=1e-37]} {Mouse: ENSMUSG00000021012, Zc3h14, zinc finger CCCH type containing 14, [RH, Score=154, Expect=2e-38]} {Dmel: FBgn0028471, Nab2, Nuclear polyadenosine RNA-binding 2, [RH, Score=144, Expect=3e-35]} {Celegans: WBGene00022019, sut-2, Zinc finger CCCH domain-containing protein 14, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_3615_0_1, dd_Smed_v6_3615_0_1, [RH, Score=186, Expect=5e-51]} {RNA1509_27588, RNA1509_37892, RNA1509_44812, RNA1509_5215} {RNA1310_6449, RNA1509_27588, RNA1509_37892, RNA1509_44812, RNA1509_5215} {RNA1509_27588, RNA1509_37892, RNA1509_44812, RNA1509_5215, RNA815_8219}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA