Data search
Results for MligTC455_21372
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21372 | 348 | 7.25 | Mlig455_020792 | Neo: - Age: - |
FBXL20 | Mlig455_020792 {REF} {Length: 2340} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=50.4]; F-box domain [PF00646.35, score=36.8]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=68.2, Expect=9e-12]} {RNA1509_13719} {RNA1310_18584} {RNA815_19408} |
Cumulative graph for MligTC455_21372
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.674 | 3.057 | 0.17596 | 0.80310 | |
| RegionR2 | 1.226 | 3.057 | 0.16134 | 0.50268 | |
| RegionR3 | 0.701 | 3.057 | 0.43934 | 0.95608 | |
| RegionR4 | 0.892 | 3.057 | 0.36317 | 0.68652 | |
| RegionR5 | 1.204 | 3.057 | 0.11361 | 0.33302 | |
| RegionR6 | 0.399 | 3.057 | 0.65950 | 1.00000 | |
| RegionR7 | -0.617 | 3.057 | 0.96753 | 1.00000 | |
| RegionR8 | 1.87 | 3.057 | 0.06744 | 0.50068 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.577 | 3.057 | 0.25389 | 0.96756 | |
| RegenerationR2 | 0.183 | 3.057 | 0.68043 | 0.94903 | |
| RegenerationR3 | 0.553 | 3.057 | 0.30998 | 0.74061 | |
| RegenerationR4 | 0.668 | 3.057 | 0.24160 | 0.69044 | |
| RegenerationR5 | 0.213 | 3.057 | 0.66367 | 0.93755 | |
| RegenerationR6 | 0.01 | 3.057 | 0.98713 | 1.00000 | |
| RegenerationBL | 0.814 | 3.057 | 0.23043 | 0.58150 | |
| RegenerationTP | -0.102 | 3.057 | 0.91031 | 1.00000 |
Genes with expression patterns similar to MligTC455_21372
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21372 | 348 | 7.25 | Mlig455_020792 | Neo: - Age: - |
FBXL20 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020792 {REF} {Length: 2340} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=50.4]; F-box domain [PF00646.35, score=36.8]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=68.2, Expect=9e-12]} {RNA1509_13719} {RNA1310_18584} {RNA815_19408} |
| 2. | MligTC455_25532 | 631 | 13.14 | Mlig455_000168 | Neo: - Age: - |
2.714 | - | - | 0.962 | - | 0.869 | 0.883 | Mlig455_000168 {REF} {Length: 1851} {TRANSSPLICED} {Pfam: Lectin C-type domain [PF00059.23, score=32.8]} {RNA1509_57829} {RNA1310_16312} {RNA815_15052} | |
| 3. | MligTC455_41101 | 260 | 5.41 | Mlig455_034223 | Neo: - Age: - |
JUN | 1.826 | 0.853 | - | - | - | - | 0.973 | Mlig455_034223 {REF} {Length: 1997} {Pfam: bZIP transcription factor [PF00170.23, score=33.8]; bZIP Maf transcription factor [PF03131.19, score=24.9]; Basic region leucine zipper [PF07716.17, score=22.5]} {Human: ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=53.9, Expect=4e-08]; ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=53.5, Expect=5e-08]} {Mouse: ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=53.9, Expect=2e-08]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]; ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=57.0, Expect=1e-09]} {Celegans: WBGene00012005, jun-1, Transcription factor jun-1, [Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_5875_0_1, dd_Smed_v6_5875_0_1, [Score=49.7, Expect=2e-07]} {RNA1509_19720} {RNA1310_26812} {RNA815_12638} |
| 4. | MligTC455_51680 | 163 | 3.4 | Mlig455_021668 | Neo: - Age: - |
1.794 | 0.828 | - | - | - | - | 0.966 | Mlig455_021668 {REF} {Length: 3625} {RNA1509_33852} {RNA1310_22260.1} {RNA815_27524} | |
| 5. | MligTC455_08966 | 67 | 1.4 | Mlig455_050187 | Neo: - Age: - |
1.74 | - | - | - | - | 0.784 | 0.956 | Mlig455_050187 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_138902} | |
| 6. | MligTC455_13848 | 348 | 7.26 | Mlig455_036175 | Neo: - |
TEKT3 | 0.985 | - | - | - | - | - | 0.985 | Mlig455_036175 {REF} {Length: 2265} {Pfam: Tektin family [PF03148.16, score=371.6]} {Human: ENSG00000125409, TEKT3, tektin 3, [Score=286, Expect=7e-91]} {Mouse: ENSMUSG00000042189, Tekt3, tektin 3, [Score=267, Expect=1e-83]} {Dmel: FBgn0040028, CG17450, [Score=205, Expect=7e-60]} {Smed: dd_Smed_v6_6511_0_1, dd_Smed_v6_6511_0_1, [Score=333, Expect=1e-109]} {RNA1509_15766} {RNA1310_13406, RNA1509_15766} {RNA1509_15766, RNA815_7559} |
| 7. | MligTC455_27848 | 604 | 12.58 | Mlig455_019526, Mlig455_036505 | Neo: - Age: - Regeneration-upregulated BL: 4.388 Regeneration-enriched BL: 4.388 |
0.976 | - | - | - | - | - | 0.976 | Mlig455_019526 {REF} {Length: 1253} {Pfam: Zinc knuckle [PF00098.25, score=21.9]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} Mlig455_036505 {REF} {Length: 2621} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} |
|
| 8. | MligTC455_53820 | 155 | 3.23 | Mlig455_065353 | Neo: Irradiation |
0.975 | - | - | - | - | - | 0.975 | Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1} | |
| 9. | MligTC455_18237 | 1138 | 23.7 | Mlig455_061064, Mlig455_061112 | Neo: - Age: Down-Up-Down |
0.97 | - | - | - | - | 0.970 | - | Mlig455_061064 {REF} {Length: 4093} {Dmel: FBgn0036416, CG7924, [Score=53.1, Expect=6e-07]} {RNA1509_19147} {RNA1310_5856.1, RNA1509_19147} {RNA1509_19147, RNA815_9645} Mlig455_061112 {REF} {Length: 3947} {RNA1509_19147} {RNA1310_5856.1} {RNA815_9645} |
|
| 10. | MligTC455_09236 | 361 | 7.53 | Mlig455_069872 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_069872 {REF} {Length: 971} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_8409.1} {RNA815_29944} | |
| 11. | MligTC455_02232 | 152 | 3.17 | Mlig455_002887 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_002887 {REF} {Length: 1354} {Dmel: FBgn0035253, CG7971, [Score=47.8, Expect=6e-06]} {RNA1310_125762} | |
| 12. | MligTC455_44439 | 69 | 1.44 | Mlig455_038143 | Neo: - Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_038143 {REF} {Length: 2756} {Pfam: RNase H [PF00075.26, score=36.9]} {RNA1509_18097} {RNA1310_30023} {RNA815_11171.1} | |
| 13. | MligTC455_29016 | 36522 | 760.88 | Mlig455_005202 | Neo: - Age: - Regeneration-enriched R1: 3.026 |
0.963 | - | - | - | - | - | 0.963 | Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} | |
| 14. | MligTC455_32665 | 2179 | 45.39 | Mlig455_007885, Mlig455_007986 | Neo: Germline Age: Up-Down-Down |
CNOT1 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_007885 {REF} {Length: 8750} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.0]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.5]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=54.9]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1030, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1027, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=608, Expect=2e-178]} {RNA1509_14437} {RNA1310_186} {RNA815_2875} Mlig455_007986 {REF} {Length: 8722} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.9]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.2]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=55.5]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1027, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1025, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=607, Expect=2e-178]} {RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1310_186, RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1509_1134, RNA1509_14437, RNA1509_44674, RNA815_2875} |
| 15. | MligTC455_44923 | 1476 | 30.74 | Mlig455_042352, Mlig455_047121 | Neo: - Age: Down-Up-Up |
WDR34 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_042352 {REF} {Length: 2248} {TRANSSPLICED} {RNA1509_10795} {RNA1310_10379} {RNA815_12215.1} Mlig455_047121 {REF} {Length: 2263} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.1]} {Human: ENSG00000119333, WDR34, WD repeat domain 34, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000039715, Wdr34, WD repeat domain 34, [Score=119, Expect=3e-28]} {Smed: dd_Smed_v6_14428_0_1, dd_Smed_v6_14428_0_1, [RH, Score=169, Expect=1e-45]} {RNA1509_10795} {RNA1310_10379, RNA1509_10795} {RNA1509_10795, RNA815_12215.1} |
| 16. | MligTC455_24520 | 255 | 5.3 | Mlig455_026510 | Neo: - Age: Up-Down-Down |
DNAH10 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_026510 {REF} {Length: 13148} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=432.5]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=367.7]; P-loop containing dynein motor region D4 [PF12780.9, score=341.6]; ATP-binding dynein motor region [PF12781.9, score=282.3]; P-loop containing dynein motor region [PF12775.9, score=262.5]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.2]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=141.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=124.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=91.3]; Dynein heavy chain AAA lid domain [PF17852.3, score=82.7]; AAA+ lid domain [PF17857.3, score=62.7]; AAA domain [PF13401.8, score=38.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.5]; AAA ATPase domain [PF13191.8, score=26.3]; AAA domain [PF13238.8, score=23.3]; Sigma-54 interaction domain [PF14532.8, score=20.3]; Sigma-54 interaction domain [PF00158.28, score=20.2]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.8]} {Human: ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [RH, Score=5142, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [RH, Score=5333, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3887, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [Score=4445, Expect=0.0]} {RNA1509_2715} {RNA1310_40.1} {RNA815_20} |
| 17. | MligTC455_29019 | 2780 | 57.92 | Mlig455_047569 | Neo: - Age: - Regeneration-enriched R3: 3.253 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_047569 {REF} {Length: 4815} {TRANSSPLICED} {RNA1509_45988} {RNA1310_79684} {RNA815_44017} | |
| 18. | MligTC455_45449 | 816 | 16.99 | Mlig455_019656, Mlig455_048058, Mlig455_048077 | Neo: - Age: - Region-enriched R5: 1.162/0.00391 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_019656 {REF} {Length: 1031} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=21.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048058 {REF} {Length: 918} {TRANSSPLICED} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048077 {REF} {Length: 950} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=77.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=105, Expect=9e-29]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} |
|
| 19. | MligTC455_27301 | 1291 | 26.89 | Mlig455_031019 | Neo: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_031019 {REF} {Length: 3754} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=177, Expect=9e-56]} {RNA1509_31486} {RNA1310_20686, RNA1509_31486} {RNA1509_31486, RNA815_9356.1} | |
| 20. | MligTC455_26269 | 294 | 6.12 | Mlig455_056660 | Neo: - Age: Up-Up-Down |
0.955 | - | - | - | - | - | 0.955 | Mlig455_056660 {REF} {Length: 6926} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=24.3]} {RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1310_5450.1, RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1509_47204, RNA1509_52342, RNA1509_55209, RNA815_7136.2} | |
| 21. | MligTC455_28214 | 50 | 1.04 | Mlig455_059063 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_059063 {REF} {Length: 2861} {Pfam: African swine fever virus J13L protein [PF05568.13, score=54.8]} {RNA1509_245} {RNA1310_71097} {RNA815_18938.2} | |
| 22. | MligTC455_49529 | 1651 | 34.4 | Mlig455_004322 | Neo: - Age: Down-Up-Up Regeneration-upregulated BL: 2.614 Regeneration-enriched BL: 2.614 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_004322 {REF} {Length: 1256} {Pfam: Glycerophosphoryl diester phosphodiesterase family [PF13653.8, score=23.0]; Glycerophosphoryl diester phosphodiesterase family [PF03009.19, score=19.8]} {RNA1509_56412} {RNA1310_24504} {RNA815_10124.1} | |
| 23. | MligTC455_41575 | 418 | 8.71 | Mlig455_012538 | Neo: - Age: Down-Up-Down |
0.95 | - | - | - | - | - | 0.950 | Mlig455_012538 {REF} {Length: 1233} {Pfam: EF hand [PF00036.34, score=47.8]; EF-hand domain pair [PF13499.8, score=46.4]; EF-hand domain [PF13405.8, score=44.3]; EF-hand domain pair [PF13833.8, score=26.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.4]; EF hand [PF13202.8, score=19.8]} {Dmel: FBgn0036926, CG7646, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=42.7, Expect=1e-05]} {RNA1509_17148} {RNA1310_42976, RNA1509_17148} {RNA1509_17148, RNA815_19784.1} |
Berezikov Lab - 2020-2021 © ERIBA