M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_08966

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08966 67 1.40 Mlig455_050187

Neo: -

Age: -

 Mlig455_050187 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_138902}

Cumulative graph for MligTC455_08966

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.834 1.133 1.00000 1.00000
RegionR2 1.11 1.133 0.99998 1.00000
RegionR3 0.204 1.133 1.00000 1.00000
RegionR4 -0.595 1.133 0.99990 1.00000
RegionR5 -0.074 1.133 0.99996 1.00000
RegionR6 0.328 1.133 0.99997 1.00000
RegionR7 0.007 1.133 0.99999 1.00000
RegionR8 -0.146 1.133 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.129 1.133 0.24607 0.96633
RegenerationR2 5.416 1.133 0.00065 0.03555
RegenerationR3 6.219 1.133 0.00337 0.10333
RegenerationR4 4.871 1.133 0.01542 0.19452
RegenerationR5 4.616 1.133 0.00703 0.15281
RegenerationR6 5.812 1.133 0.00617 0.09543
RegenerationBL 5.421 1.133 0.01101 0.10659
RegenerationTP 4.192 1.133 0.14021 0.55850


Genes with expression patterns similar to MligTC455_08966

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08966 67 1.4 Mlig455_050187

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_050187 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_138902}
2. MligTC455_53512 916 19.08 Mlig455_028726

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.315

Region-enriched R2: 1.504/0.01018

 IFT172 1.793 - - - - 0.836 0.957 Mlig455_028726 {REF} {Length: 2813} {Pfam: Region in Clathrin and VPS [PF00637.22, score=23.3]; Tetratricopeptide repeat [PF13176.8, score=19.3]} {Human: ENSG00000138002, IFT172, intraflagellar transport 172, [Score=871, Expect=0.0]} {Mouse: ENSMUSG00000038564, Ift172, intraflagellar transport 172, [Score=873, Expect=0.0]} {Dmel: FBgn0035317, Oseg2, Outer segment 2, [Score=546, Expect=5e-173]} {Celegans: WBGene00003883, osm-1, Intraflagellar transport protein osm-1, [Score=517, Expect=2e-162]} {Smed: dd_Smed_v6_10638_0_1, dd_Smed_v6_10638_0_1, [Score=615, Expect=0.0]} {RNA1509_2378} {RNA1310_994} {RNA815_250}
3. MligTC455_27287 2246 46.8 Mlig455_017309, Mlig455_017320, Mlig455_054850

Neo: -

Age: Up-Down-Down

Regeneration-upregulated BL: 2.562

Regeneration-enriched BL: 2.562

 CHD6, CHD7 1.78 - - - - 0.820 0.960

Mlig455_017309 {REF} {Length: 12411} {Pfam: SNF2-related domain [PF00176.25, score=228.4]; Helicase conserved C-terminal domain [PF00271.33, score=67.9]; Type III restriction enzyme, res subunit [PF04851.17, score=34.0]; BRK domain [PF07533.18, score=26.7]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=25.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.3]} {Human: ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [RH, Score=1174, Expect=0.0]; ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [RH, Score=1165, Expect=0.0]; ENSG00000177200, CHD9, chromodomain helicase DNA binding protein 9, [RH, Score=1161, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [RH, Score=1158, Expect=0.0]} {Mouse: ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [RH, Score=1182, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [RH, Score=1163, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [RH, Score=1162, Expect=0.0]; ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1099, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [RH, Score=988, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [Score=612, Expect=0.0]} {RNA1509_32496} {RNA1310_61.1} {RNA815_2864.1}

Mlig455_017320 {REF} {Length: 12689} {Pfam: SNF2-related domain [PF00176.25, score=228.0]; Helicase conserved C-terminal domain [PF00271.33, score=67.6]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=63.2]; Type III restriction enzyme, res subunit [PF04851.17, score=33.4]; BRK domain [PF07533.18, score=26.5]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.0]} {Human: ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [Score=1219, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [Score=1209, Expect=0.0]; ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [Score=1209, Expect=0.0]} {Mouse: ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [Score=1220, Expect=0.0]; ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [Score=1212, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [Score=1208, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [Score=1183, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1108, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [Score=1045, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [RH, Score=664, Expect=0.0]} {RNA1509_26378} {RNA1310_61.1, RNA1509_26378} {RNA1509_26378, RNA815_2864.1}

Mlig455_054850 {REF} {Length: 13730} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=228.0]; Helicase conserved C-terminal domain [PF00271.33, score=67.6]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=63.8]; Type III restriction enzyme, res subunit [PF04851.17, score=33.6]; BRK domain [PF07533.18, score=26.5]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.0]} {Human: ENSG00000124177, CHD6, chromodomain helicase DNA binding protein 6, [Score=1221, Expect=0.0]; ENSG00000171316, CHD7, chromodomain helicase DNA binding protein 7, [Score=1213, Expect=0.0]; ENSG00000100888, CHD8, chromodomain helicase DNA binding protein 8, [Score=1209, Expect=0.0]} {Mouse: ENSMUSG00000041235, Chd7, chromodomain helicase DNA binding protein 7, [Score=1223, Expect=0.0]; ENSMUSG00000056608, Chd9, chromodomain helicase DNA binding protein 9, [Score=1212, Expect=0.0]; ENSMUSG00000057133, Chd6, chromodomain helicase DNA binding protein 6, [Score=1211, Expect=0.0]; ENSMUSG00000053754, Chd8, chromodomain helicase DNA binding protein 8, [Score=1184, Expect=0.0]} {Dmel: FBgn0266557, kis, kismet, [RH, Score=1113, Expect=0.0]} {Celegans: WBGene00007053, chd-7, Chromodomain and Helicase Domain protein, [Score=1045, Expect=0.0]} {Smed: dd_Smed_v6_12815_0_1, dd_Smed_v6_12815_0_1, [RH, Score=666, Expect=0.0]} {RNA1509_32496, RNA1509_47168, RNA1509_60046} {RNA1310_61.1, RNA1509_47168, RNA1509_60046} {RNA1509_47168, RNA1509_60046, RNA815_2864.1}
4. MligTC455_21372 348 7.25 Mlig455_020792

Neo: -

Age: -

 FBXL20 1.74 - - - - 0.784 0.956 Mlig455_020792 {REF} {Length: 2340} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=50.4]; F-box domain [PF00646.35, score=36.8]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=68.2, Expect=9e-12]} {RNA1509_13719} {RNA1310_18584} {RNA815_19408}
5. MligTC455_06614 35 0.72 Mlig455_052447

Neo: -

Age: -

 1.72 - - - 0.952 0.768 - Mlig455_052447 {REF} {Length: 869} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_20081} {RNA1310_65601} {RNA815_26807}
6. MligTC455_44439 69 1.44 Mlig455_038143

Neo: -

Age: -

 1.701 - - - 0.719 - 0.982 Mlig455_038143 {REF} {Length: 2756} {Pfam: RNase H [PF00075.26, score=36.9]} {RNA1509_18097} {RNA1310_30023} {RNA815_11171.1}
7. MligTC455_25676 670 13.97 Mlig455_004461

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.456

 COL24A1 1.692 - - - - 0.957 0.735 Mlig455_004461 {REF} {Length: 4125} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=458.3]; Fibrillar collagen C-terminal domain [PF01410.20, score=140.9]} {Human: ENSG00000171502, COL24A1, collagen type XXIV alpha 1 chain, [Score=354, Expect=1e-100]} {Mouse: ENSMUSG00000029661, Col1a2, collagen, type I, alpha 2, [Score=406, Expect=6e-120]} {Dmel: FBgn0000299, Col4a1, Collagen type IV alpha 1, [Score=347, Expect=2e-98]} {Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=301, Expect=6e-84]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=464, Expect=2e-140]} {RNA1509_6841} {RNA1310_1385.1} {RNA815_7264}
8. MligTC455_44963 18 0.38 Mlig455_070386

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_070386 {REF} {Length: 1852} {Pfam: Glycine rich protein [PF12810.9, score=22.8]} {RNA1310_33363.2} {RNA815_25152}
9. MligTC455_27848 604 12.58 Mlig455_019526, Mlig455_036505

Neo: -

Age: -

Regeneration-upregulated BL: 4.388

Regeneration-enriched BL: 4.388

 0.981 - - - - - 0.981

Mlig455_019526 {REF} {Length: 1253} {Pfam: Zinc knuckle [PF00098.25, score=21.9]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}

Mlig455_036505 {REF} {Length: 2621} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
10. MligTC455_50645 44 0.91 Mlig455_036533

Neo: -

Age: -

 SCYL1 0.981 - - - 0.981 - - Mlig455_036533 {REF} {Length: 4260} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=25.7]; Protein kinase domain [PF00069.27, score=23.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=447, Expect=7e-145]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=441, Expect=6e-143]} {Dmel: FBgn0260990, yata, [RH, Score=516, Expect=4e-171]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=404, Expect=6e-129]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=460, Expect=5e-152]} {RNA1509_21531, RNA1509_23084, RNA1509_58473} {RNA1310_4140, RNA1509_21531, RNA1509_23084, RNA1509_58473} {RNA1509_21531, RNA1509_23084, RNA1509_58473, RNA815_4060}
11. MligTC455_53858 23 0.48 Mlig455_053248

Neo: -

Age: Down-Up-Up

 0.981 - - - 0.981 - - Mlig455_053248 {REF} {Length: 1450} {RNA1310_30892} {RNA815_30662}
12. MligTC455_27839 307 6.4 Mlig455_007792

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_007792 {REF} {Length: 2271} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=23.5]; Zinc knuckle [PF00098.25, score=22.0]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
13. MligTC455_26269 294 6.12 Mlig455_056660

Neo: -

Age: Up-Up-Down

 0.978 - - - - - 0.978 Mlig455_056660 {REF} {Length: 6926} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=24.3]} {RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1310_5450.1, RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1509_47204, RNA1509_52342, RNA1509_55209, RNA815_7136.2}
14. MligTC455_34462 54 1.13 Mlig455_033965, Mlig455_058027

Neo: Neoblast

Age: -

 CELF3 0.976 - - - 0.976 - -

Mlig455_033965 {REF} {Length: 634} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=49.7, Expect=5e-07]}

Mlig455_058027 {REF} {Length: 2471} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=56.6, Expect=9e-09]; ENSG00000048740, CELF2, CUGBP Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSG00000101489, CELF4, CUGBP Elav-like family member 4, [Score=55.5, Expect=4e-09]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=54.7, Expect=5e-08]; ENSG00000273025, AC009690.3, novel transcript, [Score=54.7, Expect=5e-08]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=54.7, Expect=4e-08]; ENSG00000149187, CELF1, CUGBP Elav-like family member 1, [Score=54.3, Expect=6e-08]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=57.0, Expect=5e-09]; ENSMUSG00000002107, Celf2, CUGBP, Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=55.1, Expect=2e-08]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=54.7, Expect=2e-08]; ENSMUSG00000005506, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]; ENSMUSG00000110883, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=55.5, Expect=7e-09]} {RNA1509_40041} {RNA1310_25362.1, RNA1509_40041} {RNA1509_40041, RNA815_13994}
15. MligTC455_32216 518 10.78 Mlig455_015342, Mlig455_068772

Neo: -

Age: logFC(26M/2M)=-0.399

Region-enriched R2: 2.144/0.02697

 0.975 - - - - - 0.975

Mlig455_015342 {REF} {Length: 3705} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=76.5]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.6]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=68.6, Expect=2e-12]} {RNA1509_41917} {RNA1310_22896} {RNA815_10814}

Mlig455_068772 {REF} {Length: 3285} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=44.4]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=63.9, Expect=2e-11]} {RNA1509_41917} {RNA1310_22896} {RNA815_10814}
16. MligTC455_30281 503 10.47 Mlig455_008455, Mlig455_043742

Neo: -

Age: -

 SCN11A 0.973 - - - - - 0.973

Mlig455_008455 {REF} {Length: 10354} {Pfam: Ion transport protein [PF00520.33, score=775.9]; Sodium ion transport-associated [PF06512.15, score=33.3]; Polycystin cation channel [PF08016.14, score=32.5]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=20.8]} {Human: ENSG00000168356, SCN11A, sodium voltage-gated channel alpha subunit 11, [RH, Score=1159, Expect=0.0]} {Mouse: ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [RH, Score=1349, Expect=0.0]} {Dmel: FBgn0285944, para, paralytic, [RH, Score=1102, Expect=0.0]} {Celegans: WBGene00000367, cca-1, Voltage-dependent T-type calcium channel subunit alpha, [Score=412, Expect=2e-117]} {Smed: dd_Smed_v6_13973_0_1, dd_Smed_v6_13973_0_1, [RH, Score=1383, Expect=0.0]} {RNA1509_5039} {RNA1310_554.1} {RNA815_3500.1}

Mlig455_043742 {REF} {Length: 591} {Smed: dd_Smed_v6_42647_0_1, dd_Smed_v6_42647_0_1, [RH, Score=47.0, Expect=2e-07]} {RNA1509_5039} {RNA1310_22320} {RNA815_4523.2}
17. MligTC455_41101 260 5.41 Mlig455_034223

Neo: -

Age: -

 JUN 0.973 - - - - - 0.973 Mlig455_034223 {REF} {Length: 1997} {Pfam: bZIP transcription factor [PF00170.23, score=33.8]; bZIP Maf transcription factor [PF03131.19, score=24.9]; Basic region leucine zipper [PF07716.17, score=22.5]} {Human: ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=53.9, Expect=4e-08]; ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=53.5, Expect=5e-08]} {Mouse: ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=53.9, Expect=2e-08]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]; ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=57.0, Expect=1e-09]} {Celegans: WBGene00012005, jun-1, Transcription factor jun-1, [Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_5875_0_1, dd_Smed_v6_5875_0_1, [Score=49.7, Expect=2e-07]} {RNA1509_19720} {RNA1310_26812} {RNA815_12638}
18. MligTC455_24520 255 5.3 Mlig455_026510

Neo: -

Age: Up-Down-Down

 DNAH10 0.969 - - - - - 0.969 Mlig455_026510 {REF} {Length: 13148} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=432.5]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=367.7]; P-loop containing dynein motor region D4 [PF12780.9, score=341.6]; ATP-binding dynein motor region [PF12781.9, score=282.3]; P-loop containing dynein motor region [PF12775.9, score=262.5]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.2]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=141.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=124.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=91.3]; Dynein heavy chain AAA lid domain [PF17852.3, score=82.7]; AAA+ lid domain [PF17857.3, score=62.7]; AAA domain [PF13401.8, score=38.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.5]; AAA ATPase domain [PF13191.8, score=26.3]; AAA domain [PF13238.8, score=23.3]; Sigma-54 interaction domain [PF14532.8, score=20.3]; Sigma-54 interaction domain [PF00158.28, score=20.2]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.8]} {Human: ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [RH, Score=5142, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [RH, Score=5333, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3887, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [Score=4445, Expect=0.0]} {RNA1509_2715} {RNA1310_40.1} {RNA815_20}
19. MligTC455_51680 163 3.4 Mlig455_021668

Neo: -

Age: -

 0.969 - - - - - 0.969 Mlig455_021668 {REF} {Length: 3625} {RNA1509_33852} {RNA1310_22260.1} {RNA815_27524}
20. MligTC455_18973 78 1.63 Mlig455_019347

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.600/0.01920

 0.968 - - - 0.968 - - Mlig455_019347 {REF} {Length: 1563} {RNA1509_35598, RNA1509_58186} {RNA1310_23207.2, RNA1509_58186} {RNA1509_58186, RNA815_10106}
21. MligTC455_28678 1649 34.35 Mlig455_001112, Mlig455_001114, Mlig455_042059

Neo: -

Age: -

Region-specific R6: 5.445

Region-enriched R6: 5.816/0.00000

 SLC5A8 0.968 - - - 0.968 - -

Mlig455_001112 {REF} {Length: 4229} {TRANSSPLICED} {Pfam: Sodium:solute symporter family [PF00474.19, score=115.2]} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=369, Expect=9e-119]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=369, Expect=9e-119]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=361, Expect=8e-116]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=345, Expect=2e-109]} {Dmel: FBgn0250757, CG42235, [RH, Score=309, Expect=3e-95]} {Celegans: WBGene00014092, ZK822.5, [Score=213, Expect=2e-60]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=318, Expect=5e-100]} {RNA1509_12386} {RNA1310_9016} {RNA815_2751}

Mlig455_001114 {REF} {Length: 2478} {Pfam: Sodium:solute symporter family [PF00474.19, score=102.4]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=345, Expect=6e-110]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=345, Expect=6e-110]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=337, Expect=1e-106]; ENSMUSG00000006641, Slc5a6, solute carrier family 5 (sodium-dependent vitamin transporter), member 6, [Score=336, Expect=3e-106]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=323, Expect=2e-101]} {Dmel: FBgn0250757, CG42235, [Score=292, Expect=6e-89]} {Celegans: WBGene00014092, ZK822.5, [Score=200, Expect=5e-56]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=308, Expect=3e-96]} {RNA1509_12386} {RNA1310_8136.1} {RNA815_2751}

Mlig455_042059 {REF} {Length: 885} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=90.5, Expect=6e-20]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=90.5, Expect=6e-20]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=94.0, Expect=2e-21]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=90.9, Expect=3e-20]} {Dmel: FBgn0250757, CG42235, [Score=72.4, Expect=4e-14]} {Celegans: WBGene00018716, F52H2.4, [Score=46.6, Expect=1e-05]} {RNA1509_43797} {RNA1310_9016} {RNA815_26977}
22. MligTC455_30222 149 3.11 Mlig455_018205

Neo: -

Age: Up-Down-Down

 0.968 - - - - - 0.968 Mlig455_018205 {REF} {Length: 8026} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=174.6]; PIF1-like helicase [PF05970.16, score=58.2]; AAA domain [PF13604.8, score=24.0]} {Celegans: WBGene00019136, F59H6.5, [Score=569, Expect=2e-178]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=70.9, Expect=3e-14]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}
23. MligTC455_27843 317 6.6 Mlig455_054197

Neo: -

Age: -

Regeneration-enriched R6: 4.237
Regeneration-enriched BL: 4.138

 0.967 - - - - - 0.967 Mlig455_054197 {REF} {Length: 1106} {Pfam: Zinc knuckle [PF00098.25, score=22.3]} {RNA1509_40897} {RNA1310_131.1} {RNA815_52.1}
24. MligTC455_02232 152 3.17 Mlig455_002887

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_002887 {REF} {Length: 1354} {Dmel: FBgn0035253, CG7971, [Score=47.8, Expect=6e-06]} {RNA1310_125762}
25. MligTC455_29016 36522 760.88 Mlig455_005202

Neo: -

Age: -

Regeneration-enriched R1: 3.026
Regeneration-enriched TP: 2.300
Regeneration-enriched BL: 2.050

 0.966 - - - - - 0.966 Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1}
26. MligTC455_30572 88 1.82 Mlig455_009374, Mlig455_026650

Neo: -

Age: Down-Down-Down

 NYNRIN 0.966 - - - - - 0.966

Mlig455_009374 {REF} {Length: 592} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.8]; Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=46.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=3e-73]} {RNA1509_8906} {RNA1310_1712.2} {RNA815_474.1}

Mlig455_026650 {REF} {Length: 3906} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.8]; Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=46.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=3e-73]} {RNA1509_8906} {RNA1310_1712.3} {RNA815_474.1}
27. MligTC455_34224 312 6.5 Mlig455_015246, Mlig455_056676, Mlig455_070843

Neo: -

Age: -

 0.966 - - - - - 0.966

Mlig455_015246 {REF} {Length: 251} {RNA1509_46811} {RNA1310_82283} {RNA815_19376}

Mlig455_056676 {REF} {Length: 366} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}

Mlig455_070843 {REF} {Length: 312} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
28. MligTC455_53363 477 9.94 Mlig455_042368, Mlig455_069314

Neo: -

Age: Down-Down-Up

Regeneration-enriched BL: 3.828
Regeneration-enriched R5: 2.279

 0.965 - - - - - 0.965

Mlig455_042368 {REF} {Length: 667} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=50.7]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}

Mlig455_069314 {REF} {Length: 3392} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.3]; Endonuclease-reverse transcriptase [PF14529.8, score=45.3]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}
29. MligTC455_22432 196 4.08 Mlig455_029198

Neo: -

Age: -

Region-enriched R3: 2.322/0.03362

 0.964 - - - - 0.964 - Mlig455_029198 {REF} {Length: 2065} {RNA1509_24153} {RNA1310_5420} {RNA815_3759}
30. MligTC455_47052 3864 80.49 Mlig455_070925

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.887

Regeneration-upregulated BL: 2.164

Regeneration-enriched BL: 2.164

 0.962 - - - - - 0.962 Mlig455_070925 {REF} {Length: 2072} {Pfam: F5/8 type C domain [PF00754.27, score=55.1]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_15305} {RNA1310_30437.2} {RNA815_12353}
31. MligTC455_53820 155 3.23 Mlig455_065353

Neo: Irradiation

Age: Down-Up-Down, logFC(26M/2M)=1.766

 0.962 - - - - - 0.962 Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1}
32. MligTC455_09045 28 0.58 Mlig455_030695

Neo: -

Age: -

Region-enriched R3: 3.801/0.03726

 0.96 - - - - 0.960 - Mlig455_030695 {REF} {Length: 163} {NoTransDecoderORF}
33. MligTC455_46749 217 4.51 Mlig455_031264, Mlig455_031310

Neo: -

Age: Up-Down-Up

 TSN 0.96 - - - 0.960 - -

Mlig455_031264 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Translin family [PF01997.18, score=69.4]} {Human: ENSG00000211460, TSN, translin, [Score=81.3, Expect=5e-18]} {Mouse: ENSMUSG00000026374, Tsn, translin, [Score=84.3, Expect=2e-19]} {Dmel: FBgn0033528, trsn, translin, [Score=94.4, Expect=3e-23]} {RNA1509_42077} {RNA1310_41744.1, RNA1509_42077} {RNA1509_42077, RNA815_60762}

Mlig455_031310 {REF} {Length: 1420} {TRANSSPLICED} {Pfam: Translin family [PF01997.18, score=68.9]} {Human: ENSG00000211460, TSN, translin, [Score=80.5, Expect=1e-17]} {Mouse: ENSMUSG00000026374, Tsn, translin, [Score=83.6, Expect=5e-19]} {Dmel: FBgn0033528, trsn, translin, [Score=94.7, Expect=2e-23]} {RNA1509_42077} {RNA1310_41744.1} {RNA815_60762}
34. MligTC455_35868 384 7.99 Mlig455_011681, Mlig455_037350, Mlig455_037933, Mlig455_066124

Neo: -

Age: -

 0.959 - - - - - 0.959

Mlig455_011681 {REF} {Length: 1192} {NoTransDecoderORF} {RNA1509_51528} {RNA1310_138888} {RNA815_38499}

Mlig455_037350 {REF} {Length: 573} {NoTransDecoderORF} {RNA1310_33225.1} {RNA815_38499}

Mlig455_037933 {REF} {Length: 218} {NoTransDecoderORF} {RNA1310_64101} {RNA815_38499}

Mlig455_066124 {REF} {Length: 4952} {Pfam: Domain of unknown function (DUF4956) [PF16316.7, score=19.2]} {RNA1509_56926} {RNA1310_49079} {RNA815_20842.1}
35. MligTC455_36594 446 9.28 Mlig455_050016

Neo: Int S/G2/M

Age: -

 UBL4A 0.959 - - - - - 0.959 Mlig455_050016 {REF} {Length: 2400} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.8} {Pfam: Ubiquitin family [PF00240.25, score=37.3]; WXG100 protein secretion system (Wss), protein YukD [PF08817.12, score=20.4]} {Human: ENSG00000102178, UBL4A, ubiquitin like 4A, [Score=47.0, Expect=2e-06]} {Mouse: ENSMUSG00000015290, Ubl4a, ubiquitin-like 4A, [Score=44.7, Expect=8e-06]} {RNA1509_23561} {RNA1310_42657.2, RNA1509_23561} {RNA1509_23561, RNA815_22655}
36. MligTC455_40692 293 6.1 Mlig455_006929

Neo: -

Age: Down-Up-Up

 TRPM3 0.958 - - - - - 0.958 Mlig455_006929 {REF} {Length: 6023} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=116.9]; Ankyrin repeat [PF13606.8, score=83.1]; Ankyrin repeats (many copies) [PF13637.8, score=78.8]; Ankyrin repeats (many copies) [PF13857.8, score=76.5]; Ankyrin repeat [PF00023.32, score=67.4]; Ion transport protein [PF00520.33, score=28.5]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=92.0, Expect=9e-18]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=91.3, Expect=9e-18]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=87.4, Expect=2e-16]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=85.5, Expect=4e-16]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=85.5, Expect=3e-16]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=105, Expect=1e-22]} {RNA1509_10217} {RNA1310_680} {RNA815_2721}
37. MligTC455_44923 1476 30.74 Mlig455_042352, Mlig455_047121

Neo: -

Age: Down-Up-Up

 WDR34 0.958 - - - - - 0.958

Mlig455_042352 {REF} {Length: 2248} {TRANSSPLICED} {RNA1509_10795} {RNA1310_10379} {RNA815_12215.1}

Mlig455_047121 {REF} {Length: 2263} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.1]} {Human: ENSG00000119333, WDR34, WD repeat domain 34, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000039715, Wdr34, WD repeat domain 34, [Score=119, Expect=3e-28]} {Smed: dd_Smed_v6_14428_0_1, dd_Smed_v6_14428_0_1, [RH, Score=169, Expect=1e-45]} {RNA1509_10795} {RNA1310_10379, RNA1509_10795} {RNA1509_10795, RNA815_12215.1}
38. MligTC455_49799 59 1.24 Mlig455_011473, Mlig455_011560

Neo: -

Age: Up-Down-Up

 SCNN1G 0.958 - - - - 0.958 -

Mlig455_011473 {REF} {Length: 3328} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=109.0]; WSC domain [PF01822.21, score=37.6]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=53.9, Expect=1e-06]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=52.4, Expect=2e-06]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=51.6, Expect=2e-06]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=53.1, Expect=6e-07]} {RNA1509_37881} {RNA1310_13882.2} {RNA815_32243}

Mlig455_011560 {REF} {Length: 3881} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=150.9]; WSC domain [PF01822.21, score=36.9]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=53.9, Expect=2e-06]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=52.4, Expect=3e-06]} {Celegans: WBGene00003174, mec-10, Degenerin mec-10, [Score=52.0, Expect=2e-06]} {Smed: dd_Smed_v6_31771_0_1, dd_Smed_v6_31771_0_1, [Score=54.7, Expect=2e-07]} {RNA1509_37881} {RNA1310_13882.2} {RNA815_32243}
39. MligTC455_53859 28 0.59 Mlig455_056956

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_056956 {REF} {Length: 1452} {RNA1310_30892} {RNA815_30662}
40. MligTC455_27301 1291 26.89 Mlig455_031019

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.229

 0.957 - - - - - 0.957 Mlig455_031019 {REF} {Length: 3754} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=177, Expect=9e-56]} {RNA1509_31486} {RNA1310_20686, RNA1509_31486} {RNA1509_31486, RNA815_9356.1}
41. MligTC455_53323 292 6.09 Mlig455_022584

Neo: -

Age: Up-Down-Down

 0.957 - - - - - 0.957 Mlig455_022584 {REF} {Length: 4306} {TRANSSPLICED} {RNA1509_55405, RNA1509_56628} {RNA1310_11791.1, RNA1509_56628} {RNA1509_56628, RNA815_14672}
42. MligTC455_23815 152 3.16 Mlig455_002411, Mlig455_015380

Neo: -

Age: -

 0.956 - - - - - 0.956

Mlig455_002411 {REF} {Length: 1686} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_17835} {RNA815_29786}

Mlig455_015380 {REF} {Length: 1667} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_19291} {RNA815_29786}
43. MligTC455_40286 317 6.6 Mlig455_025462

Neo: -

Age: -

 PCK1 0.956 - - - - - 0.956 Mlig455_025462 {REF} {Length: 5038} {TRANSSPLICED} {Pfam: Phosphoenolpyruvate carboxykinase C-terminal P-loop domain [PF00821.20, score=553.5]; Phosphoenolpyruvate carboxykinase N-terminal domain [PF17297.4, score=304.6]} {Human: ENSG00000124253, PCK1, phosphoenolpyruvate carboxykinase 1, [RH, Score=860, Expect=0.0]; ENSG00000100889, PCK2, phosphoenolpyruvate carboxykinase 2, mitochondrial, [RH, Score=854, Expect=0.0]; ENSG00000285241, PCK2, phosphoenolpyruvate carboxykinase 2, mitochondrial, [RH, Score=854, Expect=0.0]} {Mouse: ENSMUSG00000027513, Pck1, phosphoenolpyruvate carboxykinase 1, cytosolic, [RH, Score=856, Expect=0.0]; ENSMUSG00000040618, Pck2, phosphoenolpyruvate carboxykinase 2 (mitochondrial), [RH, Score=847, Expect=0.0]} {Dmel: FBgn0003067, Pepck, Phosphoenolpyruvate carboxykinase, [RH, Score=832, Expect=0.0]} {Celegans: WBGene00011232, pck-2, Phosphoenolypyruvate CarboxyKinase, [Score=726, Expect=0.0]} {Smed: dd_Smed_v6_6169_0_1, dd_Smed_v6_6169_0_1, [RH, Score=833, Expect=0.0]} {RNA1509_11203, RNA1509_43017} {RNA1310_10480, RNA1509_11203, RNA1509_43017} {RNA1509_11203, RNA1509_43017, RNA815_11465}
44. MligTC455_17613 16 0.34 Mlig455_057846

Neo: -

Age: -

 ADRB2 0.954 - - - - 0.954 - Mlig455_057846 {REF} {Length: 2337} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=166.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.3]} {Human: ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=114, Expect=3e-27]} {Mouse: ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=115, Expect=1e-27]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=126, Expect=3e-31]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=115, Expect=5e-28]} {Smed: dd_Smed_v6_22653_0_1, dd_Smed_v6_22653_0_1, [Score=239, Expect=2e-74]} {RNA1310_68068} {RNA815_49974}
45. MligTC455_20186 463 9.65 Mlig455_056751

Neo: -

Age: -

 TMEM132D 0.953 - - - - - 0.953 Mlig455_056751 {REF} {Length: 7153} {TRANSSPLICED} {Pfam: Transmembrane protein family 132 [PF16070.7, score=153.8]; Mature oligodendrocyte transmembrane protein, TMEM132D, C-term [PF15706.7, score=46.0]} {Human: ENSG00000151952, TMEM132D, transmembrane protein 132D, [Score=122, Expect=2e-27]} {Mouse: ENSMUSG00000034310, Tmem132d, transmembrane protein 132D, [Score=128, Expect=2e-29]} {Celegans: WBGene00022175, Y71H2AM.10, [RH, Score=96.3, Expect=7e-20]} {RNA1509_10814} {RNA1310_5791.1, RNA1509_10814} {RNA1509_10814, RNA815_6547}
46. MligTC455_20533 1376 28.68 Mlig455_029972

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_029972 {REF} {Length: 2855} {Pfam: UPF0489 domain [PF12640.9, score=39.5]} {Dmel: FBgn0030191, CG15306, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_7217_0_1, dd_Smed_v6_7217_0_1, [RH, Score=52.8, Expect=6e-07]} {RNA1509_3030} {RNA1310_9364} {RNA815_2565.1}
47. MligTC455_44773 344 7.16 Mlig455_056369

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 2.057/0.01861

 0.953 - - - - - 0.953 Mlig455_056369 {REF} {Length: 2569} {TRANSSPLICED} {RNA1509_31340, RNA1509_40584} {RNA1310_41204, RNA1509_31340, RNA1509_40584} {RNA1509_31340, RNA1509_40584, RNA815_47747}
48. MligTC455_18347 118 2.46 Mlig455_000821

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.590

 KCNA1 0.952 - - - - - 0.952 Mlig455_000821 {REF} {Length: 3163} {Pfam: Ion transport protein [PF00520.33, score=166.1]; BTB/POZ domain [PF02214.24, score=97.8]; Ion channel [PF07885.18, score=48.4]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [RH, Score=611, Expect=0.0]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [RH, Score=611, Expect=0.0]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [RH, Score=610, Expect=0.0]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [RH, Score=611, Expect=0.0]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [RH, Score=610, Expect=0.0]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [RH, Score=607, Expect=0.0]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [RH, Score=587, Expect=0.0]} {Dmel: FBgn0003380, Sh, Shaker, [RH, Score=629, Expect=0.0]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [RH, Score=377, Expect=2e-124]} {Smed: dd_Smed_v6_15425_0_1, dd_Smed_v6_15425_0_1, [RH, Score=707, Expect=0.0]} {RNA1509_47579} {RNA1310_8777} {RNA815_4701}
49. MligTC455_35997 277 5.76 Mlig455_067328

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.880

 AK5 0.952 - - - - - 0.952 Mlig455_067328 {REF} {Length: 2734} {TRANSSPLICED} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=50.8, Expect=1e-06]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=49.7, Expect=2e-06]} {RNA1509_17110} {RNA1310_19485, RNA1509_17110} {RNA1509_17110, RNA815_14117}
50. MligTC455_44397 535 11.14 Mlig455_063492

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.446

 LSM5 0.952 - - - - - 0.952 Mlig455_063492 {REF} {Length: 491} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=70.9]} {Human: ENSG00000106355, LSM5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Mouse: ENSMUSG00000091625, Lsm5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0035675, CG6610, [RH, Score=122, Expect=9e-38]} {Celegans: WBGene00003079, lsm-5, LSM Sm-like protein, [RH, Score=128, Expect=2e-40]} {Smed: dd_Smed_v6_606_1_1, dd_Smed_v6_606_1_1, [RH, Score=120, Expect=3e-37]} {RNA1509_35408, RNA1509_50613} {RNA1310_50094.1, RNA1509_35408, RNA1509_50613} {RNA1509_35408, RNA1509_50613, RNA815_24740}
51. MligTC455_23139 144 2.99 Mlig455_035186

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_035186 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_23857} {RNA1310_64187}
52. MligTC455_28214 50 1.04 Mlig455_059063

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_059063 {REF} {Length: 2861} {Pfam: African swine fever virus J13L protein [PF05568.13, score=54.8]} {RNA1509_245} {RNA1310_71097} {RNA815_18938.2}
53. MligTC455_47051 3486 72.62 Mlig455_009503

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.389

Regeneration-upregulated BL: 1.613

Regeneration-enriched BL: 1.613

 0.951 - - - - - 0.951 Mlig455_009503 {REF} {Length: 2503} {Pfam: F5/8 type C domain [PF00754.27, score=79.3]; Sad1 / UNC-like C-terminal [PF07738.15, score=27.0]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=51.2, Expect=3e-07]} {RNA1509_20089} {RNA1310_38721} {RNA815_6421.1}
54. MligTC455_53057 14 0.3 Mlig455_011938

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_011938 {REF} {Length: 4849} {Smed: dd_Smed_v6_2582_0_3, dd_Smed_v6_2582_0_3, [Score=59.7, Expect=9e-09]} {RNA1310_18760}
55. MligTC455_53776 1482 30.87 Mlig455_023429

Neo: -

Age: -

Region-enriched R2: 1.233/0.02014

 0.951 - - - - - 0.951 Mlig455_023429 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: 6-bladed beta-propeller [PF17170.6, score=31.5]; zinc-RING finger domain [PF14634.8, score=25.9]; NHL repeat [PF01436.23, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=24.6]; RING-type zinc-finger [PF13445.8, score=23.6]; Prokaryotic RING finger family 4 [PF14447.8, score=19.6]} {RNA1509_5029} {RNA1310_5086.1} {RNA815_4935.1}
56. MligTC455_16747 264 5.5 Mlig455_041822

Neo: -

Age: -

 PPP1R8 0.95 - - - - - 0.950 Mlig455_041822 {REF} {Length: 3270} {Pfam: FHA domain [PF00498.28, score=54.5]} {Human: ENSG00000117751, PPP1R8, protein phosphatase 1 regulatory subunit 8, [RH, Score=286, Expect=5e-93]} {Mouse: ENSMUSG00000028882, Ppp1r8, protein phosphatase 1, regulatory subunit 8, [RH, Score=285, Expect=8e-93]} {Dmel: FBgn0026402, NiPp1, Nuclear inhibitor of Protein phosphatase 1, [RH, Score=280, Expect=1e-90]} {Celegans: WBGene00015233, B0511.7, [RH, Score=176, Expect=2e-51]} {Smed: dd_Smed_v6_6770_0_1, dd_Smed_v6_6770_0_1, [RH, Score=322, Expect=2e-107]} {RNA1509_31655} {RNA1310_7382.2, RNA1509_31655} {RNA1509_31655, RNA815_6925.1}
57. MligTC455_27432 372 7.76 Mlig455_012694

Neo: -

Age: -

Region-enriched R2: 2.305/0.00773

 TRERF1 0.95 - - - - - 0.950 Mlig455_012694 {REF} {Length: 5602} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=63.6]; Zinc-finger double domain [PF13465.8, score=34.0]; ELM2 domain [PF01448.26, score=28.2]; C2H2-type zinc finger [PF13894.8, score=27.6]; C2H2-type zinc finger [PF13912.8, score=23.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.3]} {Human: ENSG00000124496, TRERF1, transcriptional regulating factor 1, [RH, Score=119, Expect=1e-26]; ENSG00000118156, ZNF541, zinc finger protein 541, [RH, Score=116, Expect=9e-26]} {Mouse: ENSMUSG00000116235, Trerf1, transcriptional regulating factor 1, [RH, Score=119, Expect=1e-26]; ENSMUSG00000078796, Zfp541, zinc finger protein 541, [RH, Score=114, Expect=4e-25]} {Dmel: FBgn0037698, CG16779, [RH, Score=124, Expect=3e-28]} {Celegans: WBGene00010012, saeg-1, Suppressor of activated egl-4 protein 1, [RH, Score=114, Expect=1e-25]} {Smed: dd_Smed_v6_6649_0_1, dd_Smed_v6_6649_0_1, [RH, Score=199, Expect=6e-52]} {RNA1509_13645, RNA1509_22271, RNA1509_37042, RNA1509_43804, RNA1509_46558, RNA1509_49938} {RNA1310_15660, RNA1509_13645, RNA1509_22271, RNA1509_37042, RNA1509_43804, RNA1509_46558, RNA1509_49938} {RNA1509_13645, RNA1509_22271, RNA1509_37042, RNA1509_43804, RNA1509_46558, RNA1509_49938, RNA815_15988}
58. MligTC455_29919 253 5.28 Mlig455_047771

Neo: -

Age: -

Region-enriched R8: 3.157/0.02236

 PRR9 0.95 - - - - - 0.950 Mlig455_047771 {REF} {Length: 4344} {TRANSSPLICED} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=49.7, Expect=3e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=52.0, Expect=3e-07]} {RNA1509_42296} {RNA1310_15876.1} {RNA815_5293}
59. MligTC455_36593 730 15.2 Mlig455_011527, Mlig455_011603

Neo: -

Age: -

 0.95 - - - - - 0.950

Mlig455_011527 {REF} {Length: 781} {NoTransDecoderORF} {RNA1509_28091} {RNA1310_53522} {RNA815_28309}

Mlig455_011603 {REF} {Length: 937} {NoTransDecoderORF} {RNA1509_28091} {RNA1310_53522} {RNA815_28309}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA