Data search
Results for MligTC455_21402
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_21402 | 986 | 20.54 | Mlig455_004010, Mlig455_004094 | Neo: - Age: Down-Up-Up |
SLC38A10 | Mlig455_004010 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=164.2]; Tryptophan/tyrosine permease family [PF03222.15, score=33.8]} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [Score=271, Expect=3e-78]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [Score=277, Expect=1e-80]} {Dmel: FBgn0050394, CG30394, [RH, Score=238, Expect=4e-68]} {Celegans: WBGene00021765, Y51F10.4, [Score=192, Expect=4e-53]} {Smed: dd_Smed_v6_11525_0_2, dd_Smed_v6_11525_0_2, [RH, Score=205, Expect=1e-59]} {RNA1509_30902} {RNA1310_4708.1} {RNA815_535.1} Mlig455_004094 {REF} {Length: 2462} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [Score=102, Expect=3e-22]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [Score=118, Expect=1e-27]} {Dmel: FBgn0050394, CG30394, [Score=90.5, Expect=9e-19]} {Celegans: WBGene00021765, Y51F10.4, [Score=67.8, Expect=5e-12]} {Smed: dd_Smed_v6_11525_0_2, dd_Smed_v6_11525_0_2, [Score=82.8, Expect=6e-17]} {RNA1509_30902} {RNA1310_4708.1} {RNA815_535.1} |
Cumulative graph for MligTC455_21402
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.197 | 4.573 | 0.81490 | 1.00000 | |
| RegionR2 | -0.37 | 4.573 | 0.33924 | 0.73107 | |
| RegionR3 | 0.181 | 4.573 | 0.55491 | 1.00000 | |
| RegionR4 | -0.105 | 4.573 | 0.77415 | 1.00000 | |
| RegionR5 | 0.294 | 4.573 | 0.30138 | 0.63705 | |
| RegionR6 | -0.624 | 4.573 | 0.07220 | 0.50010 | |
| RegionR7 | 0.291 | 4.573 | 0.47620 | 1.00000 | |
| RegionR8 | 0.136 | 4.573 | 0.80235 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.329 | 4.573 | 0.01202 | 0.47137 | |
| RegenerationR2 | -0.101 | 4.573 | 0.76010 | 0.97687 | |
| RegenerationR3 | 0.002 | 4.573 | 0.99760 | 1.00000 | |
| RegenerationR4 | 0.17 | 4.573 | 0.63192 | 0.92402 | |
| RegenerationR5 | -0.153 | 4.573 | 0.63556 | 0.92479 | |
| RegenerationR6 | 0.699 | 4.573 | 0.06010 | 0.30829 | |
| RegenerationBL | 0.707 | 4.573 | 0.06317 | 0.29198 | |
| RegenerationTP | -0.733 | 4.573 | 0.13723 | 0.55499 |
Genes with expression patterns similar to MligTC455_21402
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_21402 | 986 | 20.54 | Mlig455_004010, Mlig455_004094 | Neo: - Age: Down-Up-Up |
SLC38A10 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004010 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=164.2]; Tryptophan/tyrosine permease family [PF03222.15, score=33.8]} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [Score=271, Expect=3e-78]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [Score=277, Expect=1e-80]} {Dmel: FBgn0050394, CG30394, [RH, Score=238, Expect=4e-68]} {Celegans: WBGene00021765, Y51F10.4, [Score=192, Expect=4e-53]} {Smed: dd_Smed_v6_11525_0_2, dd_Smed_v6_11525_0_2, [RH, Score=205, Expect=1e-59]} {RNA1509_30902} {RNA1310_4708.1} {RNA815_535.1} Mlig455_004094 {REF} {Length: 2462} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [Score=102, Expect=3e-22]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [Score=118, Expect=1e-27]} {Dmel: FBgn0050394, CG30394, [Score=90.5, Expect=9e-19]} {Celegans: WBGene00021765, Y51F10.4, [Score=67.8, Expect=5e-12]} {Smed: dd_Smed_v6_11525_0_2, dd_Smed_v6_11525_0_2, [Score=82.8, Expect=6e-17]} {RNA1509_30902} {RNA1310_4708.1} {RNA815_535.1} |
| 2. | MligTC455_44891 | 1027 | 21.4 | Mlig455_020674, Mlig455_059261 | Neo: Int S/G2/M Age: - |
SMARCC2 | 1.683 | 0.719 | - | - | - | - | 0.964 | Mlig455_020674 {REF} {Length: 4439} {TRANSSPLICED} {Pfam: SWIRM-associated domain at the N-terminal [PF16496.7, score=268.8]; SWIRM domain [PF04433.19, score=105.3]; SWIRM-associated region 1 [PF16495.7, score=90.3]; SWIRM-associated domain at the C-terminal [PF16498.7, score=48.8]; Myb-like DNA-binding domain [PF00249.33, score=41.8]; Myb-like DNA-binding domain [PF13921.8, score=27.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [Score=410, Expect=8e-123]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [Score=410, Expect=8e-123]} {Dmel: FBgn0002783, mor, moira, [Score=371, Expect=3e-109]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [Score=210, Expect=3e-56]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [Score=620, Expect=0.0]} {RNA1509_5153} {RNA1310_2189} {RNA815_8217} Mlig455_059261 {REF} {Length: 4628} {Pfam: SWIRM-associated domain at the N-terminal [PF16496.7, score=268.7]; SWIRM domain [PF04433.19, score=105.1]; SWIRM-associated region 1 [PF16495.7, score=90.2]; SWIRM-associated domain at the C-terminal [PF16498.7, score=50.1]; Myb-like DNA-binding domain [PF00249.33, score=41.7]; Myb-like DNA-binding domain [PF13921.8, score=27.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [Score=410, Expect=7e-122]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [Score=410, Expect=2e-122]} {Dmel: FBgn0002783, mor, moira, [Score=371, Expect=2e-108]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [Score=209, Expect=4e-56]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [Score=619, Expect=0.0]} {RNA1509_49479, RNA1509_5153, RNA1509_57629} {RNA1310_2189, RNA1509_49479, RNA1509_5153, RNA1509_57629} {RNA1509_49479, RNA1509_5153, RNA1509_57629, RNA815_8217} |
| 3. | MligTC455_54330 | 7696 | 160.34 | Mlig455_041323, Mlig455_041349, Mlig455_056238 | Neo: Neoblast, stringent |
RBBP4 | 1.665 | - | - | - | 0.712 | - | 0.953 | Mlig455_041323 {REF} {Length: 1697} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=99.4]; WD domain, G-beta repeat [PF00400.34, score=98.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_10409} {RNA1310_2174.1} {RNA815_6795} Mlig455_041349 {REF} {Length: 1697} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=99.4]; WD domain, G-beta repeat [PF00400.34, score=98.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_10409} {RNA1310_2174.1} {RNA815_6795} Mlig455_056238 {REF} {Length: 1697} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=99.4]; WD domain, G-beta repeat [PF00400.34, score=98.8]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=766, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=743, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_10409, RNA1509_44954, RNA1509_51345} {RNA1310_2174.1, RNA1509_10409, RNA1509_44954, RNA1509_51345} {RNA1509_10409, RNA1509_44954, RNA1509_51345, RNA815_6795} |
| 4. | MligTC455_18959 | 774 | 16.12 | Mlig455_042418 | Neo: Int S/G2/M Age: - |
GEMIN2 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_042418 {REF} {Length: 1155} {TRANSSPLICED} {Pfam: Survival motor neuron (SMN) interacting protein 1 (SIP1) [PF04938.14, score=147.1]} {Human: ENSG00000092208, GEMIN2, gem nuclear organelle associated protein 2, [RH, Score=92.0, Expect=7e-21]} {Mouse: ENSMUSG00000060121, Gemin2, gem nuclear organelle associated protein 2, [RH, Score=105, Expect=4e-26]} {Celegans: WBGene00004886, smi-1, SMN (Survival of motor neuron) protein Interactor, [Score=62.0, Expect=6e-11]} {Smed: dd_Smed_v6_11175_0_4, dd_Smed_v6_11175_0_4, [Score=51.2, Expect=2e-07]} {RNA1509_43080} {RNA1310_28644} {RNA815_45784} |
| 5. | MligTC455_21403 | 312 | 6.51 | Mlig455_004043 | Neo: - Age: logFC(26M/2M)=0.530 |
SLC38A10 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_004043 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=175.6]; Tryptophan/tyrosine permease family [PF03222.15, score=30.3]} {Human: ENSG00000157637, SLC38A10, solute carrier family 38 member 10, [RH, Score=290, Expect=8e-85]} {Mouse: ENSMUSG00000061306, Slc38a10, solute carrier family 38, member 10, [RH, Score=300, Expect=5e-89]} {Dmel: FBgn0050394, CG30394, [RH, Score=249, Expect=9e-72]} {Celegans: WBGene00021765, Y51F10.4, [RH, Score=206, Expect=6e-58]} {Smed: dd_Smed_v6_11525_0_1, dd_Smed_v6_11525_0_1, [RH, Score=216, Expect=1e-63]} {RNA1509_30902} {RNA1310_4708.1, RNA1509_30902} {RNA1509_30902, RNA815_535.1} |
| 6. | MligTC455_51302 | 430 | 8.96 | Mlig455_027390 | Neo: - Age: Down-Down-Up Region-enriched R5: 1.407/0.01233 |
TIMM22 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_027390 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Tim17/Tim22/Tim23/Pmp24 family [PF02466.21, score=94.4]} {Human: ENSG00000177370, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000278501, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]; ENSG00000277649, TIMM22, translocase of inner mitochondrial membrane 22, [RH, Score=143, Expect=9e-43]} {Mouse: ENSMUSG00000020843, Timm22, translocase of inner mitochondrial membrane 22, [RH, Score=144, Expect=3e-43]} {Dmel: FBgn0051229, CG31229, [RH, Score=115, Expect=3e-32]} {Celegans: WBGene00008164, C47G2.3, Mitochondrial import inner membrane translocase subunit tim-22, [RH, Score=133, Expect=7e-39]} {Smed: dd_Smed_v6_9333_0_1, dd_Smed_v6_9333_0_1, [RH, Score=177, Expect=3e-56]} {RNA1509_23050, RNA1509_32512, RNA1509_50982} {RNA1310_46537, RNA1509_23050, RNA1509_32512, RNA1509_50982} {RNA1509_23050, RNA1509_32512, RNA1509_50982, RNA815_22653} |
| 7. | MligTC455_26330 | 546 | 11.37 | Mlig455_015718, Mlig455_015724 | Neo: - Age: logFC(26M/2M)=-0.277 |
HELZ2 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_015718 {REF} {Length: 189} {NoTransDecoderORF} {RNA1509_2441} {RNA1310_415.3} {RNA815_175} Mlig455_015724 {REF} {Length: 7180} {Pfam: RNB domain [PF00773.21, score=180.1]; AAA domain [PF13087.8, score=133.5]; AAA domain [PF13086.8, score=132.7]; AAA domain [PF13604.8, score=22.5]; Dis3-like cold-shock domain 2 (CSD2) [PF17849.3, score=20.4]} {Human: ENSG00000130589, HELZ2, helicase with zinc finger 2, [Score=159, Expect=3e-38]} {Mouse: ENSMUSG00000027580, Helz2, helicase with zinc finger 2, transcriptional coactivator, [RH, Score=265, Expect=2e-70]} {Dmel: FBgn0039183, Dis3, [Score=115, Expect=3e-25]} {Celegans: WBGene00018612, disl-2, DIS3-like exonuclease 2, [Score=106, Expect=1e-22]} {Smed: dd_Smed_v6_8176_0_1, dd_Smed_v6_8176_0_1, [RH, Score=311, Expect=3e-85]} {RNA1509_2441, RNA1509_28777, RNA1509_37932, RNA1509_51203, RNA1509_51729, RNA1509_9712} {RNA1310_415.3, RNA1509_28777, RNA1509_37932, RNA1509_51203, RNA1509_51729, RNA1509_9712} {RNA1509_28777, RNA1509_37932, RNA1509_51203, RNA1509_51729, RNA1509_9712, RNA815_175} |
| 8. | MligTC455_42622 | 818 | 17.05 | Mlig455_002600 | Neo: Int S/G2/M Age: Down-Up-Down Regeneration-upregulated BL: 1.616 Regeneration-enriched BL: 1.616 |
RBM17 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_002600 {REF} {Length: 1563} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=48.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=31.0]} {Human: ENSG00000134453, RBM17, RNA binding motif protein 17, [RH, Score=199, Expect=4e-59]} {Mouse: ENSMUSG00000037197, Rbm17, RNA binding motif protein 17, [RH, Score=197, Expect=7e-59]} {Dmel: FBgn0086683, Spf45, [RH, Score=160, Expect=5e-45]} {Celegans: WBGene00010233, F58B3.7, [RH, Score=119, Expect=4e-30]} {Smed: dd_Smed_v6_4530_0_1, dd_Smed_v6_4530_0_1, [RH, Score=234, Expect=5e-74]} {RNA1509_10111} {RNA1310_21374, RNA1509_10111} {RNA1509_10111, RNA815_7888} |
| 9. | MligTC455_49391 | 1700 | 35.41 | Mlig455_040829, Mlig455_040928, Mlig455_049169 | Neo: - Age: Down-Up-Up |
0.953 | - | - | - | - | - | 0.953 | Mlig455_040829 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199} {RNA1310_39586, RNA1509_19199} {RNA1509_19199, RNA815_40218} Mlig455_040928 {REF} {Length: 1511} {TRANSSPLICED} {RNA1509_19199, RNA1509_30421, RNA1509_55207} {RNA1310_39586, RNA1509_30421, RNA1509_55207} {RNA1509_30421, RNA1509_55207, RNA815_40218} Mlig455_049169 {REF} {Length: 836} {RNA1509_19199} {RNA1310_39586} {RNA815_40218} |
|
| 10. | MligTC455_21289 | 431 | 8.99 | Mlig455_065603 | Neo: - Age: Up-Down-Down |
CCNYL1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_065603 {REF} {Length: 2997} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=36.6]; Cyclin [PF08613.13, score=30.4]} {Human: ENSG00000163249, CCNYL1, cyclin Y like 1, [RH, Score=197, Expect=2e-64]} {Mouse: ENSMUSG00000024286, Ccny, cyclin Y, [Score=204, Expect=1e-64]; ENSMUSG00000070871, Ccnyl1, cyclin Y-like 1, [Score=198, Expect=5e-63]} {Dmel: FBgn0032378, CycY, Cyclin Y, [Score=199, Expect=4e-62]} {Celegans: WBGene00022697, cyy-1, Cyclin-Y, [Score=191, Expect=1e-59]} {Smed: dd_Smed_v6_8226_0_1, dd_Smed_v6_8226_0_1, [Score=177, Expect=5e-54]} {RNA1509_8018} {RNA1310_8716} {RNA815_15699} |
| 11. | MligTC455_20318 | 572 | 11.91 | Mlig455_025879 | Neo: - Age: logFC(26M/2M)=-0.315 |
CSPP1 | 0.951 | - | - | 0.951 | - | - | - | Mlig455_025879 {REF} {Length: 6491} {TRANSSPLICED} {Human: ENSG00000104218, CSPP1, centrosome and spindle pole associated protein 1, [RH, Score=148, Expect=2e-35]} {Mouse: ENSMUSG00000056763, Cspp1, centrosome and spindle pole associated protein 1, [RH, Score=149, Expect=6e-36]} {Smed: dd_Smed_v6_13453_0_1, dd_Smed_v6_13453_0_1, [RH, Score=145, Expect=5e-35]} {RNA1509_36070, RNA1509_37407, RNA1509_4731, RNA1509_50746} {RNA1310_5083.1, RNA1509_36070, RNA1509_37407, RNA1509_50746} {RNA1509_36070, RNA1509_37407, RNA1509_50746, RNA815_9871} |
| 12. | MligTC455_48056 | 184 | 3.83 | Mlig455_048769 | Neo: - Age: Up-Down-Down |
0.95 | - | - | - | - | - | 0.950 | Mlig455_048769 {REF} {Length: 7379} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=33.3]} {RNA1509_29567, RNA1509_33291} {RNA1310_923.1, RNA1509_29567} {RNA1509_29567, RNA815_1595} |