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Results for MligTC455_22520

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22520 1063 22.15 Mlig455_000386, Mlig455_067959

Neo: Irradiation

Age: Up-Down-Down

 TRANK1

Mlig455_000386 {REF} {Length: 10595} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=28.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.6]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=676, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_45240, RNA1509_48487} {RNA1310_139, RNA1509_45240} {RNA1509_45240, RNA815_523}

Mlig455_067959 {REF} {Length: 11658} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=29.4]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1310_139, RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1509_26643, RNA1509_4147, RNA1509_52069, RNA815_523}

Cumulative graph for MligTC455_22520

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.124 4.749 0.89010 1.00000
RegionR2 0.474 4.749 0.29001 0.67867
RegionR3 -0.381 4.749 0.30018 0.84241
RegionR4 -0.443 4.749 0.31725 0.63362
RegionR5 0.076 4.749 0.81094 1.00000
RegionR6 -0.529 4.749 0.14696 0.68427
RegionR7 0.749 4.749 0.05745 0.46043
RegionR8 -0.071 4.749 0.89524 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.124 4.749 0.07213 0.75678
RegenerationR2 0.379 4.749 0.33123 0.76807
RegenerationR3 0.336 4.749 0.45243 0.83282
RegenerationR4 0.064 4.749 0.88745 1.00000
RegenerationR5 0.328 4.749 0.41861 0.81029
RegenerationR6 0.858 4.749 0.04988 0.27952
RegenerationBL 0.845 4.749 0.06625 0.29987
RegenerationTP -0.955 4.749 0.08982 0.47170


Genes with expression patterns similar to MligTC455_22520

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22520 1063 22.15 Mlig455_000386, Mlig455_067959

Neo: Irradiation

Age: Up-Down-Down

 TRANK1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_000386 {REF} {Length: 10595} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=28.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.6]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=676, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_45240, RNA1509_48487} {RNA1310_139, RNA1509_45240} {RNA1509_45240, RNA815_523}

Mlig455_067959 {REF} {Length: 11658} {TRANSSPLICED} {Pfam: AAA domain [PF13245.8, score=31.4]; UvrD/REP helicase N-terminal domain [PF00580.23, score=29.4]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.8]} {Human: ENSG00000168016, TRANK1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=679, Expect=0.0]} {Mouse: ENSMUSG00000062296, Trank1, tetratricopeptide repeat and ankyrin repeat containing 1, [RH, Score=667, Expect=0.0]} {RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1310_139, RNA1509_26643, RNA1509_4147, RNA1509_52069} {RNA1509_26643, RNA1509_4147, RNA1509_52069, RNA815_523}
2. MligTC455_20528 641 13.35 Mlig455_065326

Neo: -

Age: -

 UBE2R2 1.785 - - - 0.829 - 0.956 Mlig455_065326 {REF} {Length: 3018} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=156.1]} {Human: ENSG00000107341, UBE2R2, ubiquitin conjugating enzyme E2 R2, [RH, Score=273, Expect=3e-92]; ENSG00000099804, CDC34, cell division cycle 34, [RH, Score=264, Expect=2e-88]} {Mouse: ENSMUSG00000036241, Ube2r2, ubiquitin-conjugating enzyme E2R 2, [RH, Score=273, Expect=2e-92]; ENSMUSG00000020307, Cdc34, cell division cycle 34, [RH, Score=264, Expect=1e-88]} {Dmel: FBgn0036516, CG7656, [RH, Score=280, Expect=5e-94]} {Celegans: WBGene00006702, ubc-3, UBiquitin Conjugating enzyme, [RH, Score=259, Expect=5e-87]} {Smed: dd_Smed_v6_8367_0_1, dd_Smed_v6_8367_0_1, [RH, Score=263, Expect=1e-88]} {RNA1509_26801, RNA1509_28288, RNA1509_38647} {RNA1310_27367, RNA1509_26801, RNA1509_28288, RNA1509_38647} {RNA1509_26801, RNA1509_28288, RNA1509_38647, RNA815_10408}
3. MligTC455_42584 525 10.95 Mlig455_042688

Neo: -

Age: Up-Down-Down

 1.747 - 0.794 - - 0.953 - Mlig455_042688 {REF} {Length: 5118} {RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976} {RNA1310_33323.1, RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976} {RNA1509_17142, RNA1509_30424, RNA1509_39157, RNA1509_52976, RNA815_23056}
4. MligTC455_21484 859 17.9 Mlig455_066724, Mlig455_066738

Neo: -

Age: Up-Down-Down

 SMARCA4 1.727 - - - - 0.769 0.958

Mlig455_066724 {REF} {Length: 6429} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_12350} {RNA1310_706} {RNA815_1261}

Mlig455_066738 {REF} {Length: 211} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=253.6]; Helicase conserved C-terminal domain [PF00271.33, score=71.6]; Bromodomain [PF00439.27, score=67.6]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=47.6]; QLQ [PF08880.13, score=44.9]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; BRK domain [PF07533.18, score=42.4]; HSA [PF07529.15, score=39.3]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=27.3]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1274, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1261, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1270, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1264, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1092, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1261, Expect=0.0]} {RNA1509_31848} {RNA1310_706} {RNA815_29239}
5. MligTC455_29038 254 5.28 Mlig455_046381

Neo: -

Age: -

 C2CD3 0.968 - - - 0.968 - - Mlig455_046381 {REF} {Length: 8683} {TRANSSPLICED} {Human: ENSG00000168014, C2CD3, C2 calcium dependent domain containing 3, [RH, Score=466, Expect=1e-132]} {Mouse: ENSMUSG00000047248, C2cd3, C2 calcium-dependent domain containing 3, [RH, Score=452, Expect=1e-128]} {Dmel: FBgn0052425, CG32425, [RH, Score=78.2, Expect=5e-14]} {Smed: dd_Smed_v6_13019_0_1, dd_Smed_v6_13019_0_1, [RH, Score=316, Expect=1e-86]} {RNA1509_8945} {RNA1310_1613.1} {RNA815_2069}
6. MligTC455_13856 56 1.17 Mlig455_016845, Mlig455_021086

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_016845 {REF} {Length: 2080} {NoTransDecoderORF} {RNA1509_22296} {RNA1310_52077.1} {RNA815_57758}

Mlig455_021086 {REF} {Length: 2107} {NoTransDecoderORF} {RNA1509_22296} {RNA1310_52077.1} {RNA815_57758}
7. MligTC455_34089 171 3.57 Mlig455_037823

Neo: -

Age: -

 OTUD7B 0.959 - - - 0.959 - - Mlig455_037823 {REF} {Length: 4251} {Pfam: OTU-like cysteine protease [PF02338.21, score=69.0]} {Human: ENSG00000264522, OTUD7B, OTU deubiquitinase 7B, [Score=231, Expect=2e-65]} {Mouse: ENSMUSG00000038495, Otud7b, OTU domain containing 7B, [Score=233, Expect=2e-66]} {Dmel: FBgn0037734, trbd, trabid, [Score=114, Expect=4e-26]} {Celegans: WBGene00021733, otub-2, OTUBain deubiquitylating protease homolog, [RH, Score=229, Expect=2e-66]} {Smed: dd_Smed_v6_10637_0_1, dd_Smed_v6_10637_0_1, [RH, Score=236, Expect=9e-70]} {RNA1509_56848, RNA1509_8829} {RNA1310_3455, RNA1509_56848} {RNA1509_56848, RNA815_3496}
8. MligTC455_04564 742 15.45 Mlig455_038816

Neo: -

Age: Down-Up-Down

 GET4 0.958 - - - 0.958 - - Mlig455_038816 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Golgi to ER traffic protein 4 [PF04190.15, score=170.8]} {Human: ENSG00000239857, GET4, golgi to ER traffic protein 4, [RH, Score=201, Expect=5e-62]} {Mouse: ENSMUSG00000025858, Get4, golgi to ER traffic protein 4, [RH, Score=186, Expect=2e-56]} {Dmel: FBgn0086605, CG9853, [RH, Score=145, Expect=6e-41]} {Smed: dd_Smed_v6_7734_0_1, dd_Smed_v6_7734_0_1, [RH, Score=169, Expect=4e-50]} {RNA1509_32148, RNA1509_54341} {RNA1310_28338.1, RNA1509_54341} {RNA1509_54341, RNA815_12431}
9. MligTC455_30360 19 0.39 Mlig455_026674

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_026674 {REF} {Length: 565} {Pfam: Integrase core domain [PF00665.28, score=25.7]} {Smed: dd_Smed_v6_11155_0_1, dd_Smed_v6_11155_0_1, [Score=57.8, Expect=5e-11]} {RNA1509_14877} {RNA1310_28454.1} {RNA815_5959.1}
10. MligTC455_04563 750 15.62 Mlig455_038799

Neo: -

Age: -

 0.956 - - - 0.956 - - Mlig455_038799 {REF} {Length: 2039} {RNA1509_24595, RNA1509_54341} {RNA1310_59579, RNA1509_24595} {RNA1509_24595, RNA815_27833.1}
11. MligTC455_29240 750 15.62 Mlig455_002714

Neo: -

Age: logFC(26M/2M)=0.682

Region-enriched R5: 1.468/0.00081

 TUBGCP3 0.954 - 0.954 - - - - Mlig455_002714 {REF} {Length: 3645} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=266.4]; Gamma tubulin complex component C-terminal [PF04130.15, score=254.5]} {Human: ENSG00000126216, TUBGCP3, tubulin gamma complex associated protein 3, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000000759, Tubgcp3, tubulin, gamma complex associated protein 3, [RH, Score=624, Expect=0.0]} {Dmel: FBgn0001612, Grip91, Gamma-tubulin ring protein 91, [RH, Score=371, Expect=2e-113]} {Smed: dd_Smed_v6_9688_0_1, dd_Smed_v6_9688_0_1, [RH, Score=416, Expect=2e-131]} {RNA1509_5764} {RNA1310_394.2, RNA1509_5764} {RNA1509_5764, RNA815_906}
12. MligTC455_42289 636 13.25 Mlig455_027508

Neo: -

Age: -

Region-enriched R5: 1.036/0.00139

 SACM1L 0.954 - - - 0.954 - - Mlig455_027508 {REF} {Length: 2956} {Pfam: SacI homology domain [PF02383.20, score=269.3]} {Human: ENSG00000211456, SACM1L, SAC1 like phosphatidylinositide phosphatase, [RH, Score=532, Expect=0.0]} {Mouse: ENSMUSG00000025240, Sacm1l, SAC1 suppressor of actin mutations 1-like (yeast), [RH, Score=531, Expect=0.0]} {Dmel: FBgn0283500, Sac1, Sac1 phosphatase, [RH, Score=433, Expect=2e-145]} {Celegans: WBGene00009264, sac-1, SAC1 PIP phosphatase (Yeast Suppressor of ACtin) homolog, [RH, Score=404, Expect=6e-134]} {Smed: dd_Smed_v6_3882_0_1, dd_Smed_v6_3882_0_1, [RH, Score=459, Expect=1e-155]} {RNA1509_18875, RNA1509_25818, RNA1509_36443, RNA1509_54775} {RNA1310_3604.2, RNA1509_18875, RNA1509_25818, RNA1509_54775} {RNA1509_18875, RNA1509_25818, RNA1509_54775, RNA815_2551.1}
13. MligTC455_29239 761 15.86 Mlig455_002473

Neo: -

Age: -

Region-enriched R5: 1.456/0.00100

 TUBGCP3 0.952 - 0.952 - - - - Mlig455_002473 {REF} {Length: 3639} {TRANSSPLICED} {Pfam: Gamma tubulin complex component N-terminal [PF17681.3, score=266.1]; Gamma tubulin complex component C-terminal [PF04130.15, score=254.5]} {Human: ENSG00000126216, TUBGCP3, tubulin gamma complex associated protein 3, [RH, Score=621, Expect=0.0]} {Mouse: ENSMUSG00000000759, Tubgcp3, tubulin, gamma complex associated protein 3, [RH, Score=625, Expect=0.0]} {Dmel: FBgn0001612, Grip91, Gamma-tubulin ring protein 91, [RH, Score=372, Expect=5e-114]} {Smed: dd_Smed_v6_9688_0_1, dd_Smed_v6_9688_0_1, [RH, Score=415, Expect=7e-131]} {RNA1509_29850, RNA1509_5764} {RNA1310_394.2, RNA1509_29850} {RNA1509_29850, RNA815_906}

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