M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_21628

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21628 55 1.15 Mlig455_024976

Neo: -

Age: -

 Mlig455_024976 {REF} {Length: 321} {NoTransDecoderORF} {RNA1509_51521} {RNA1310_102257} {RNA815_13536.2}

Cumulative graph for MligTC455_21628

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.542 1.216 0.36579 1.00000
RegionR2 -1.486 1.216 0.27879 0.66542
RegionR3 -1.068 1.216 0.31192 0.85115
RegionR4 1.043 1.216 0.42266 0.75088
RegionR5 -1.249 1.216 0.24194 0.55409
RegionR6 0.193 1.216 0.87762 1.00000
RegionR7 0.087 1.216 0.96902 1.00000
RegionR8 -0.062 1.216 0.95069 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.676 1.216 0.34873 1.00000
RegenerationR2 -1.111 1.216 0.34962 0.78156
RegenerationR3 -0.339 1.216 0.77239 0.97237
RegenerationR4 -2.088 1.216 0.09691 0.48308
RegenerationR5 0.038 1.216 0.96953 1.00000
RegenerationR6 -2.176 1.216 0.11135 0.41129
RegenerationBL -4.344 1.216 0.11053 0.39219
RegenerationTP -1.853 1.216 0.30863 0.75311


Genes with expression patterns similar to MligTC455_21628

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21628 55 1.15 Mlig455_024976

Neo: -

Age: -

 4 - 1.000 1.000 - 1.000 1.000 Mlig455_024976 {REF} {Length: 321} {NoTransDecoderORF} {RNA1509_51521} {RNA1310_102257} {RNA815_13536.2}
2. MligTC455_07920 131 2.73 Mlig455_029217

Neo: -

Age: -

Region-enriched R6: 5.473/0.00039

 OSR1 1.845 - 0.877 - - 0.968 - Mlig455_029217 {REF} {Length: 1175} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.3]; Zinc-finger double domain [PF13465.8, score=46.0]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=28.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.7]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [RH, Score=178, Expect=8e-55]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [RH, Score=171, Expect=1e-51]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [RH, Score=176, Expect=3e-54]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [RH, Score=171, Expect=5e-52]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=159, Expect=2e-46]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=170, Expect=4e-52]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [RH, Score=189, Expect=3e-59]} {RNA1509_57522} {RNA1310_38770} {RNA815_13682.1}
3. MligTC455_21153 1730 36.05 Mlig455_033791, Mlig455_033841

Neo: Int S/G2/M

Age: -

 ACTL6A 1.781 - - 0.959 - 0.822 -

Mlig455_033791 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=435.4]; MreB/Mbl protein [PF06723.15, score=18.4]} {Human: ENSG00000136518, ACTL6A, actin like 6A, [RH, Score=461, Expect=1e-160]; ENSG00000077080, ACTL6B, actin like 6B, [RH, Score=450, Expect=3e-156]} {Mouse: ENSMUSG00000027671, Actl6a, actin-like 6A, [RH, Score=460, Expect=3e-160]; ENSMUSG00000029712, Actl6b, actin-like 6B, [RH, Score=445, Expect=1e-154]} {Dmel: FBgn0025716, Bap55, Brahma associated protein 55kD, [RH, Score=449, Expect=2e-156]} {Celegans: WBGene00022774, swsn-6, SWI/SNF nucleosome remodeling complex component, [RH, Score=416, Expect=3e-143]} {Smed: dd_Smed_v6_2794_0_1, dd_Smed_v6_2794_0_1, [RH, Score=458, Expect=3e-160]} {RNA1509_8540} {RNA1310_1131} {RNA815_9002}

Mlig455_033841 {REF} {Length: 2199} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=434.0]; MreB/Mbl protein [PF06723.15, score=18.5]} {Human: ENSG00000136518, ACTL6A, actin like 6A, [RH, Score=459, Expect=9e-160]; ENSG00000077080, ACTL6B, actin like 6B, [RH, Score=448, Expect=2e-155]} {Mouse: ENSMUSG00000027671, Actl6a, actin-like 6A, [RH, Score=458, Expect=1e-159]; ENSMUSG00000029712, Actl6b, actin-like 6B, [RH, Score=444, Expect=2e-154]} {Dmel: FBgn0025716, Bap55, Brahma associated protein 55kD, [RH, Score=448, Expect=6e-156]} {Celegans: WBGene00022774, swsn-6, SWI/SNF nucleosome remodeling complex component, [RH, Score=414, Expect=1e-142]} {Smed: dd_Smed_v6_2794_0_1, dd_Smed_v6_2794_0_1, [RH, Score=456, Expect=2e-159]} {RNA1509_10754, RNA1509_8540} {RNA1310_1131, RNA1509_10754, RNA1509_8540} {RNA1509_10754, RNA1509_8540, RNA815_9002}
4. MligTC455_17005 1198 24.95 Mlig455_055085

Neo: -

Age: logFC(26M/2M)=-0.672

Region-enriched R5: 5.466/0.00001

 ANK1 1.694 - - 0.729 - 0.965 - Mlig455_055085 {REF} {Length: 4336} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=143.2]; Ankyrin repeats (many copies) [PF13857.8, score=126.0]; Ankyrin repeats (many copies) [PF13637.8, score=116.2]; Ankyrin repeat [PF00023.32, score=98.7]; Ankyrin repeat [PF13606.8, score=89.6]; Mab-21 protein [PF03281.16, score=52.0]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=129, Expect=3e-29]; ENSG00000151150, ANK3, ankyrin 3, [Score=128, Expect=6e-29]; ENSG00000145362, ANK2, ankyrin 2, [Score=125, Expect=3e-28]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=131, Expect=3e-30]} {Dmel: FBgn0039590, CG10011, [Score=124, Expect=3e-28]} {Celegans: WBGene00015646, mlt-10, [RH, Score=173, Expect=1e-44]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=130, Expect=6e-31]} {RNA1509_56892} {RNA1310_14215} {RNA815_12297}
5. MligTC455_01233 64 1.33 Mlig455_054264

Neo: -

Age: -

Region-enriched R6: 7.099/0.03616

 1 - - - - 1.000 - Mlig455_054264 {REF} {Length: 486} {RNA1509_51755} {RNA1310_25050.1} {RNA815_12951}
6. MligTC455_01232 74 1.55 Mlig455_016220

Neo: -

Age: -

Region-enriched R6: 7.177/0.02790

 0.999 - - - - 0.999 - Mlig455_016220 {REF} {Length: 1235} {RNA1509_51755, RNA1509_9784} {RNA1310_25050.2, RNA1509_9784} {RNA1509_9784, RNA815_12951}
7. MligTC455_39903 11 0.24 Mlig455_000444, Mlig455_000505

Neo: -

Age: -

 0.999 - - - - 0.999 -

Mlig455_000444 {REF} {Length: 578} {NoTransDecoderORF}

Mlig455_000505 {REF} {Length: 587} {NoTransDecoderORF}
8. MligTC455_06601 14 0.28 Mlig455_044486

Neo: -

Age: -

 0.997 - - - - 0.997 - Mlig455_044486 {REF} {Length: 120} {NoTransDecoderORF} {RNA1509_20181} {RNA1310_31021} {RNA815_29563}
9. MligTC455_38392 361 7.52 Mlig455_005992

Neo: -

Age: -

Region-enriched R6: 6.270/0.00000

 ADAMTS19 0.997 - - - - 0.997 - Mlig455_005992 {REF} {Length: 1792} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=34.5]; ADAM cysteine-rich domain [PF17771.3, score=28.4]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=23.5]; Metallo-peptidase family M12 [PF13688.8, score=21.0]} {Human: ENSG00000145808, ADAMTS19, ADAM metallopeptidase with thrombospondin type 1 motif 19, [Score=62.4, Expect=1e-09]} {Mouse: ENSMUSG00000053441, Adamts19, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19, [Score=61.2, Expect=2e-09]} {Dmel: FBgn0034903, sona, sol narae, [Score=53.1, Expect=4e-07]} {RNA1509_31560, RNA1509_55852} {RNA1310_5612, RNA1509_31560} {RNA1509_31560, RNA815_2636.1}
10. MligTC455_33688 1392 29 Mlig455_049554

Neo: -

Age: -

Region-enriched R6: 7.279/0.00000

 ALPL 0.995 - - - - 0.995 - Mlig455_049554 {REF} {Length: 2146} {Pfam: Alkaline phosphatase [PF00245.22, score=389.9]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=21.1]} {Human: ENSG00000162551, ALPL, alkaline phosphatase, liver/bone/kidney, [Score=352, Expect=4e-115]} {Mouse: ENSMUSG00000028766, Alpl, alkaline phosphatase, liver/bone/kidney, [Score=357, Expect=3e-117]} {Dmel: FBgn0016123, Alp4, Alkaline phosphatase 4, [RH, Score=302, Expect=2e-95]} {Smed: dd_Smed_v6_8942_0_1, dd_Smed_v6_8942_0_1, [Score=289, Expect=3e-91]} {RNA1509_26719, RNA1509_38712, RNA1509_5173} {RNA1310_14406, RNA1509_26719, RNA1509_38712, RNA1509_5173} {RNA1509_26719, RNA1509_38712, RNA1509_5173, RNA815_5415}
11. MligTC455_38393 151 3.15 Mlig455_066602

Neo: -

Age: -

Region-enriched R6: 6.635/0.00000

 ADAMTS8 0.993 - - - - 0.993 - Mlig455_066602 {REF} {Length: 1768} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=42.1]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=27.8]; Metallo-peptidase family M12 [PF13688.8, score=26.5]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=21.4]} {Human: ENSG00000134917, ADAMTS8, ADAM metallopeptidase with thrombospondin type 1 motif 8, [Score=59.3, Expect=9e-09]} {Mouse: ENSMUSG00000031994, Adamts8, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8, [Score=59.7, Expect=4e-09]} {Celegans: WBGene00020567, T19D2.1, [Score=66.2, Expect=2e-11]} {RNA1509_41739} {RNA1310_5612} {RNA815_2636.1}
12. MligTC455_49341 80 1.67 Mlig455_050615

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.547

 METTL15 0.993 - - - - 0.993 - Mlig455_050615 {REF} {Length: 3873} {TRANSSPLICED} {tRNA: Ser(AGA), score=93.1} {Pfam: MraW methylase family [PF01795.21, score=227.7]; NHL repeat [PF01436.23, score=32.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.7]; RING-type zinc-finger [PF13445.8, score=23.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.0]; Ring finger domain [PF13639.8, score=19.0]} {Human: ENSG00000169519, METTL15, methyltransferase like 15, [RH, Score=232, Expect=5e-67]} {Mouse: ENSMUSG00000057234, Mettl15, methyltransferase like 15, [RH, Score=233, Expect=2e-67]} {Dmel: FBgn0037822, CG14683, [RH, Score=224, Expect=4e-65]} {Smed: dd_Smed_v6_6390_0_6, dd_Smed_v6_6390_0_6, [RH, Score=204, Expect=2e-58]} {RNA1509_46216} {RNA1310_15757} {RNA815_22710.1}
13. MligTC455_20484 34 0.71 Mlig455_065789

Neo: -

Age: -

 0.989 - - - - 0.989 - Mlig455_065789 {REF} {Length: 1952} {NoTransDecoderORF} {RNA1509_59036} {RNA1310_140391} {RNA815_21157}
14. MligTC455_15323 17 0.36 Mlig455_031217

Neo: -

Age: -

 0.984 - - - - 0.984 - Mlig455_031217 {REF} {Length: 2070} {RNA1310_49157} {RNA815_61068}
15. MligTC455_04635 4 0.08 Mlig455_016315

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_016315 {REF} {Length: 1017} {RNA815_53445}
16. MligTC455_24921 169 3.53 Mlig455_055130, Mlig455_064022, Mlig455_068594

Neo: -

Age: -

 0.975 - - - - 0.975 -

Mlig455_055130 {REF} {Length: 5554} {Mouse: ENSMUSG00000079051, Gm14025, predicted gene 14025, [Score=58.9, Expect=6e-08]} {RNA1509_36794, RNA1509_45848} {RNA1310_3132.1, RNA1509_45848} {RNA1509_45848, RNA815_9224}

Mlig455_064022 {REF} {Length: 5554} {Mouse: ENSMUSG00000079051, Gm14025, predicted gene 14025, [Score=58.5, Expect=7e-08]} {RNA1509_36794} {RNA1310_3132.1} {RNA815_9224}

Mlig455_068594 {REF} {Length: 4836} {Pfam: Vinculin family [PF01044.21, score=20.7]} {RNA1509_36794} {RNA1310_3132.1} {RNA815_9224}
17. MligTC455_27341 260 5.42 Mlig455_016124

Neo: -

Age: Up-Down-Up

Region-enriched R2: 3.072/0.00434
Region-enriched R5: 2.037/0.00073

 PRDM9 0.974 - - 0.974 - - - Mlig455_016124 {REF} {Length: 4648} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=34.3]; Zinc finger, C2H2 type [PF00096.28, score=26.0]; C2H2-type zinc finger [PF13912.8, score=25.3]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]} {Human: ENSG00000164256, PRDM9, PR/SET domain 9, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=54.3, Expect=2e-07]} {Dmel: FBgn0029697, CG15570, [Score=61.6, Expect=8e-10]} {RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208} {RNA1310_27790.1, RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208} {RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208, RNA815_25328}
18. MligTC455_34534 168 3.5 Mlig455_049250

Neo: -

Age: -

 LITAF 0.973 - - - - 0.973 - Mlig455_049250 {REF} {Length: 1099} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=78.4]; SprT-like zinc ribbon domain [PF17283.4, score=19.2]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [Score=75.1, Expect=8e-18]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=79.0, Expect=2e-19]} {Smed: dd_Smed_v6_26606_0_1, dd_Smed_v6_26606_0_1, [Score=74.3, Expect=9e-19]} {RNA1509_59268} {RNA1310_31303} {RNA815_15626.1}
19. MligTC455_22387 57 1.18 Mlig455_029531

Neo: -

Age: -

Region-enriched R8: 4.882/0.02042
Region-enriched R6: 3.284/0.01903

 0.972 - - - - 0.972 - Mlig455_029531 {REF} {Length: 730} {RNA1509_30152} {RNA1310_42927} {RNA815_3479.2}
20. MligTC455_43041 13 0.26 Mlig455_062479

Neo: -

Age: Down-Up-Up

 0.971 - - - - 0.971 - Mlig455_062479 {REF} {Length: 1904} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=87.8, Expect=4e-20]} {RNA1310_19254} {RNA815_11059}
21. MligTC455_33687 49 1.02 Mlig455_042864, Mlig455_042877

Neo: -

Age: Down-Up-Down

 ALPI, ALPL 0.969 - - - - 0.969 -

Mlig455_042864 {REF} {Length: 2134} {Pfam: Alkaline phosphatase [PF00245.22, score=338.4]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=20.9]} {Human: ENSG00000162551, ALPL, alkaline phosphatase, liver/bone/kidney, [Score=305, Expect=1e-98]} {Mouse: ENSMUSG00000028766, Alpl, alkaline phosphatase, liver/bone/kidney, [Score=307, Expect=9e-100]} {Dmel: FBgn0038845, CG10827, [Score=265, Expect=1e-83]} {Smed: dd_Smed_v6_8942_0_1, dd_Smed_v6_8942_0_1, [Score=247, Expect=6e-77]} {RNA1509_5173} {RNA1310_14406} {RNA815_5415}

Mlig455_042877 {REF} {Length: 2747} {Pfam: Alkaline phosphatase [PF00245.22, score=35.0]} {Human: ENSG00000163295, ALPI, alkaline phosphatase, intestinal, [Score=65.1, Expect=1e-10]; ENSG00000163286, ALPG, alkaline phosphatase, germ cell, [Score=64.3, Expect=2e-10]; ENSG00000163283, ALPP, alkaline phosphatase, placental, [Score=63.2, Expect=5e-10]} {Mouse: ENSMUSG00000079440, Alpi, alkaline phosphatase, intestinal, [Score=63.2, Expect=3e-10]; ENSMUSG00000026246, Alppl2, alkaline phosphatase, placental-like 2, [Score=63.2, Expect=3e-10]; ENSMUSG00000036500, Akp3, alkaline phosphatase 3, intestine, not Mn requiring, [Score=60.1, Expect=3e-09]} {Dmel: FBgn0016123, Alp4, Alkaline phosphatase 4, [Score=55.1, Expect=8e-08]} {Smed: dd_Smed_v6_13011_0_1, dd_Smed_v6_13011_0_1, [Score=60.5, Expect=7e-10]} {RNA1509_5173} {RNA1310_14406} {RNA815_5415}
22. MligTC455_43039 6 0.12 Mlig455_062477

Neo: -

Age: Down-Down-Up

 0.965 - - - - 0.965 - Mlig455_062477 {REF} {Length: 1058} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=97.4, Expect=7e-24]} {RNA1310_19875} {RNA815_11059}
23. MligTC455_41385 132 2.75 Mlig455_039567

Neo: -

Age: -

 CCDC169 0.964 - - - - - 0.964 Mlig455_039567 {REF} {Length: 1699} {Pfam: Domain of unknown function (DUF4600) [PF15372.8, score=91.5]} {Human: ENSG00000242715, CCDC169, coiled-coil domain containing 169, [Score=77.4, Expect=8e-17]} {Mouse: ENSMUSG00000048655, Ccdc169, coiled-coil domain containing 169, [Score=78.6, Expect=2e-17]} {Smed: dd_Smed_v6_12011_0_1, dd_Smed_v6_12011_0_1, [Score=160, Expect=4e-49]} {RNA1509_20316} {RNA1310_44021} {RNA815_20814}
24. MligTC455_30702 48 1 Mlig455_004774

Neo: -

Age: -

 0.963 - 0.963 - - - - Mlig455_004774 {REF} {Length: 1942} {Pfam: Mab-21 protein [PF03281.16, score=25.2]} {RNA1509_13499} {RNA1310_32502} {RNA815_923}
25. MligTC455_51077 34 0.71 Mlig455_060577

Neo: -

Age: -

 ARFGEF3 0.962 - - - - 0.962 - Mlig455_060577 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: Dimerisation and cyclophilin-binding domain of Mon2 [PF16213.7, score=40.3]} {Human: ENSG00000112379, ARFGEF3, ARFGEF family member 3, [Score=82.0, Expect=7e-18]} {Mouse: ENSMUSG00000019852, Arfgef3, ARFGEF family member 3, [Score=82.0, Expect=5e-18]} {Celegans: WBGene00013711, Y106G6G.2, [Score=50.4, Expect=1e-07]} {RNA1509_14718} {RNA1310_30427} {RNA815_32671}
26. MligTC455_33823 22 0.45 Mlig455_015132, Mlig455_037776

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_015132 {REF} {Length: 409} {NoTransDecoderORF} {RNA1310_39704} {RNA815_51915}

Mlig455_037776 {REF} {Length: 423} {NoTransDecoderORF} {RNA1310_39704} {RNA815_51915}
27. MligTC455_42456 78 1.62 Mlig455_006172

Neo: -

Age: -

 0.96 - 0.960 - - - - Mlig455_006172 {REF} {Length: 4779} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=36.5]; Aspartyl protease [PF13650.8, score=23.2]; Retroviral aspartyl protease [PF00077.22, score=20.8]; Eukaryotic translation initiation factor 3 subunit G [PF12353.10, score=19.4]} {RNA1509_29592} {RNA1310_10223} {RNA815_18935}
28. MligTC455_14561 13 0.27 Mlig455_034012

Neo: -

Age: -

 SCNN1G 0.958 - - - - 0.958 - Mlig455_034012 {REF} {Length: 2646} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.5]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=95.1, Expect=7e-20]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=92.8, Expect=3e-19]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=87.0, Expect=8e-18]} {Smed: dd_Smed_v6_19727_0_1, dd_Smed_v6_19727_0_1, [Score=119, Expect=4e-28]} {RNA1310_62957} {RNA815_39090}
29. MligTC455_14260 24 0.49 Mlig455_057199

Neo: Irradiation

Age: logFC(26M/2M)=0.576

 RARB 0.957 - - - - 0.957 - Mlig455_057199 {REF} {Length: 3614} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=107.2]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=49.7]} {Human: ENSG00000077092, RARB, retinoic acid receptor beta, [RH, Score=223, Expect=6e-67]; ENSG00000131759, RARA, retinoic acid receptor alpha, [RH, Score=219, Expect=3e-65]; ENSG00000172819, RARG, retinoic acid receptor gamma, [RH, Score=218, Expect=1e-65]} {Mouse: ENSMUSG00000017491, Rarb, retinoic acid receptor, beta, [RH, Score=222, Expect=7e-67]; ENSMUSG00000001288, Rarg, retinoic acid receptor, gamma, [RH, Score=218, Expect=3e-65]; ENSMUSG00000037992, Rara, retinoic acid receptor, alpha, [RH, Score=217, Expect=1e-64]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [RH, Score=147, Expect=3e-37]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [RH, Score=142, Expect=5e-37]} {RNA1310_25263} {RNA815_35184}
30. MligTC455_18172 6 0.12 Mlig455_045435

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_045435 {REF} {Length: 965} {NoTransDecoderORF} {RNA1509_51264} {RNA1310_112128}
31. MligTC455_48588 65 1.36 Mlig455_021654

Neo: -

Age: Up-Down-Up

 0.955 - - 0.955 - - - Mlig455_021654 {REF} {Length: 1549} {RNA1509_55222} {RNA1310_10626, RNA1509_55222} {RNA1509_55222, RNA815_87.1}
32. MligTC455_32695 269 5.61 Mlig455_031878

Neo: -

Age: -

Region-enriched R5: 2.191/0.02917

 0.953 - - 0.953 - - - Mlig455_031878 {REF} {Length: 1821} {TRANSSPLICED} {Pfam: Ribosome recycling factor [PF01765.21, score=70.6]} {Mouse: ENSMUSG00000026887, Mrrf, mitochondrial ribosome recycling factor, [RH, Score=57.4, Expect=2e-09]} {Dmel: FBgn0035980, mRRF1, mitochondrial ribosome recycling factor 1, [RH, Score=77.0, Expect=2e-16]} {RNA1509_38843} {RNA1310_31804} {RNA815_29259}
33. MligTC455_36355 2635 54.9 Mlig455_049764

Neo: -

Age: -

Region-enriched R6: 4.773/0.00000

 ANOS1 0.953 - - - - 0.953 - Mlig455_049764 {REF} {Length: 3483} {Pfam: Fibronectin type III domain [PF00041.23, score=64.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=26.5]; WAP-type (Whey Acidic Protein) 'four-disulfide core' [PF00095.23, score=22.9]} {Human: ENSG00000011201, ANOS1, anosmin 1, [RH, Score=166, Expect=5e-42]} {Smed: dd_Smed_v6_6746_0_1, dd_Smed_v6_6746_0_1, [RH, Score=253, Expect=1e-72]} {RNA1509_15282} {RNA1310_3612.1} {RNA815_4193}
34. MligTC455_52353 162 3.38 Mlig455_055362, Mlig455_055421

Neo: -

Age: -

 PLPP6 0.952 - - - - - 0.952

Mlig455_055362 {REF} {Length: 3844} {Pfam: PAP2 superfamily [PF01569.23, score=55.4]; PAP2 superfamily [PF14378.8, score=29.9]} {Human: ENSG00000205808, PLPP6, phospholipid phosphatase 6, [RH, Score=75.5, Expect=6e-16]} {Mouse: ENSMUSG00000040105, Plpp6, phospholipid phosphatase 6, [RH, Score=77.0, Expect=1e-16]} {Dmel: FBgn0051717, CG31717, [RH, Score=73.6, Expect=4e-16]} {Celegans: WBGene00020486, T13C5.6, [RH, Score=77.8, Expect=7e-18]} {Smed: dd_Smed_v6_11684_0_1, dd_Smed_v6_11684_0_1, [RH, Score=76.3, Expect=1e-17]} {RNA1509_56728} {RNA1310_61277} {RNA815_16579}

Mlig455_055421 {REF} {Length: 3579} {Mouse: ENSMUSG00000040105, Plpp6, phospholipid phosphatase 6, [Score=46.2, Expect=2e-06]} {Smed: dd_Smed_v6_11684_0_1, dd_Smed_v6_11684_0_1, [Score=55.8, Expect=1e-10]} {RNA1509_56728} {RNA1310_61277} {RNA815_16579}
35. MligTC455_01850 3 0.06 Mlig455_022171

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_022171 {REF} {Length: 413} {NoTransDecoderORF} {RNA1509_33446} {RNA1310_9913} {RNA815_13562.1}
36. MligTC455_21990 54 1.13 Mlig455_024880

Neo: -

Age: -

 SLC25A51 0.95 - - - - 0.950 - Mlig455_024880 {REF} {Length: 1877} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=106.6]} {Human: ENSG00000122696, SLC25A51, solute carrier family 25 member 51, [Score=187, Expect=2e-56]} {Mouse: ENSMUSG00000045973, Slc25a51, solute carrier family 25, member 51, [Score=189, Expect=3e-57]} {Dmel: FBgn0039741, CG7943, [Score=173, Expect=3e-51]} {Celegans: WBGene00011858, T20D3.5, [Score=114, Expect=6e-30]} {Smed: dd_Smed_v6_8610_0_1, dd_Smed_v6_8610_0_1, [Score=184, Expect=5e-56]} {RNA1509_18045} {RNA1310_1889.1} {RNA815_20900}
37. MligTC455_35380 31 0.64 Mlig455_066533

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_066533 {REF} {Length: 2577} {RNA1509_47429} {RNA1310_16224} {RNA815_17701}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA