Data search
Results for MligTC455_35380
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35380 | 31 | 0.64 | Mlig455_066533 | Neo: - Age: - |
Mlig455_066533 {REF} {Length: 2577} {RNA1509_47429} {RNA1310_16224} {RNA815_17701} |
Cumulative graph for MligTC455_35380
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.988 | 1.1 | 0.99982 | 1.00000 | |
| RegionR2 | -0.727 | 1.1 | 0.87352 | 1.00000 | |
| RegionR3 | -1.601 | 1.1 | 0.99979 | 1.00000 | |
| RegionR4 | 3.462 | 1.1 | 0.10123 | 0.30995 | |
| RegionR5 | 2.137 | 1.1 | 0.16632 | 0.43232 | |
| RegionR6 | 0.638 | 1.1 | 0.51630 | 1.00000 | |
| RegionR7 | -1.717 | 1.1 | 0.99975 | 1.00000 | |
| RegionR8 | -1.205 | 1.1 | 0.99991 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.38 | 1.1 | 1.00000 | 1.00000 | |
| RegenerationR2 | 2.62 | 1.1 | 0.20162 | 0.64769 | |
| RegenerationR3 | 2.088 | 1.1 | 0.32362 | 0.75149 | |
| RegenerationR4 | 0.44 | 1.1 | 0.91813 | 1.00000 | |
| RegenerationR5 | 0.435 | 1.1 | 0.92353 | 1.00000 | |
| RegenerationR6 | -3.264 | 1.1 | 0.13902 | 0.45712 | |
| RegenerationBL | 1.616 | 1.1 | 0.55467 | 0.91078 | |
| RegenerationTP | 1.579 | 1.1 | 0.62264 | 0.97391 |
Genes with expression patterns similar to MligTC455_35380
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35380 | 31 | 0.64 | Mlig455_066533 | Neo: - Age: - |
3 | - | - | 1.000 | - | 1.000 | 1.000 | Mlig455_066533 {REF} {Length: 2577} {RNA1509_47429} {RNA1310_16224} {RNA815_17701} | |
| 2. | MligTC455_27341 | 260 | 5.42 | Mlig455_016124 | Neo: - Age: Up-Down-Up Region-enriched R2: 3.072/0.00434 |
PRDM9 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_016124 {REF} {Length: 4648} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=34.3]; Zinc finger, C2H2 type [PF00096.28, score=26.0]; C2H2-type zinc finger [PF13912.8, score=25.3]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]} {Human: ENSG00000164256, PRDM9, PR/SET domain 9, [Score=57.4, Expect=3e-08]} {Mouse: ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=54.3, Expect=2e-07]} {Dmel: FBgn0029697, CG15570, [Score=61.6, Expect=8e-10]} {RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208} {RNA1310_27790.1, RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208} {RNA1509_25977, RNA1509_44359, RNA1509_50029, RNA1509_50208, RNA815_25328} |
| 3. | MligTC455_31460 | 489 | 10.18 | Mlig455_004816, Mlig455_004883, Mlig455_004897 | Neo: - Age: - |
ATF3, JUND | 0.96 | - | - | 0.960 | - | - | - | Mlig455_004816 {REF} {Length: 4915} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=48.5]; Basic region leucine zipper [PF07716.17, score=32.7]; bZIP Maf transcription factor [PF03131.19, score=19.6]} {Human: ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=58.5, Expect=6e-09]; ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=57.4, Expect=2e-08]} {Mouse: ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=58.5, Expect=4e-09]; ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=57.0, Expect=1e-08]} {Dmel: FBgn0001297, kay, kayak, [Score=64.7, Expect=6e-11]} {RNA1509_17888} {RNA1310_24181, RNA1509_17888} {RNA1509_17888, RNA815_15830} Mlig455_004883 {REF} {Length: 4920} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=28.4]; Herpesvirus large structural phosphoprotein UL32 [PF06070.13, score=16.6]} {Dmel: FBgn0001297, kay, kayak, [Score=51.6, Expect=4e-07]} {RNA1509_22204} {RNA1310_24181, RNA1509_22204} {RNA1509_22204, RNA815_15830} Mlig455_004897 {REF} {Length: 2063} {tRNA: Met(CAT),pseudo, score=20.4} {Pfam: bZIP transcription factor [PF00170.23, score=44.4]; Basic region leucine zipper [PF07716.17, score=29.7]} {Human: ENSG00000162772, ATF3, activating transcription factor 3, [RH, Score=53.1, Expect=4e-08]} {Mouse: ENSMUSG00000026628, Atf3, activating transcription factor 3, [RH, Score=50.1, Expect=8e-07]} {Dmel: FBgn0001297, kay, kayak, [RH, Score=63.5, Expect=1e-10]} {RNA1509_22204} {RNA1310_24181} {RNA815_15830} |
| 4. | MligTC455_26112 | 54 | 1.13 | Mlig455_036946 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_036946 {REF} {Length: 3272} {RNA1509_41127} {RNA1310_25191} {RNA815_5881.1} | |
| 5. | MligTC455_28165 | 240 | 5 | Mlig455_045224 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_045224 {REF} {Length: 2222} {TRANSSPLICED} {RNA1509_39965, RNA1509_56116} {RNA1310_18902, RNA1509_39965, RNA1509_56116} {RNA1509_39965, RNA1509_56116, RNA815_23283} | |
| 6. | MligTC455_30640 | 21 | 0.43 | Mlig455_033340, Mlig455_059920, Mlig455_059921 | Neo: Int S/G2/M |
0.951 | - | - | - | - | 0.951 | - | Mlig455_033340 {REF} {Length: 1064} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=115.7]} {RNA1310_20156} {RNA815_48681} Mlig455_059920 {REF} {Length: 6501} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=108.0]} {RNA1509_55441} {RNA1310_13439} {RNA815_28604} Mlig455_059921 {REF} {Length: 1555} {NoTransDecoderORF} {RNA1509_55441} {RNA1310_69678.1} {RNA815_49809} |
|
| 7. | MligTC455_21628 | 55 | 1.15 | Mlig455_024976 | Neo: - Age: - |
0.95 | - | - | 0.950 | - | - | - | Mlig455_024976 {REF} {Length: 321} {NoTransDecoderORF} {RNA1509_51521} {RNA1310_102257} {RNA815_13536.2} |