M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_14260

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_14260 24 0.49 Mlig455_057199

Neo: Irradiation

Age: logFC(26M/2M)=0.576

 RARB Mlig455_057199 {REF} {Length: 3614} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=107.2]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=49.7]} {Human: ENSG00000077092, RARB, retinoic acid receptor beta, [RH, Score=223, Expect=6e-67]; ENSG00000131759, RARA, retinoic acid receptor alpha, [RH, Score=219, Expect=3e-65]; ENSG00000172819, RARG, retinoic acid receptor gamma, [RH, Score=218, Expect=1e-65]} {Mouse: ENSMUSG00000017491, Rarb, retinoic acid receptor, beta, [RH, Score=222, Expect=7e-67]; ENSMUSG00000001288, Rarg, retinoic acid receptor, gamma, [RH, Score=218, Expect=3e-65]; ENSMUSG00000037992, Rara, retinoic acid receptor, alpha, [RH, Score=217, Expect=1e-64]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [RH, Score=147, Expect=3e-37]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [RH, Score=142, Expect=5e-37]} {RNA1310_25263} {RNA815_35184}

Cumulative graph for MligTC455_14260

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.638 0.96 0.99989 1.00000
RegionR2 2.784 0.96 0.33927 0.73108
RegionR3 -1.131 0.96 1.00000 1.00000
RegionR4 -2.133 0.96 1.00000 1.00000
RegionR5 4.535 0.96 0.01156 0.06415
RegionR6 -1.02 0.96 0.99997 1.00000
RegionR7 -0.712 0.96 0.99992 1.00000
RegionR8 -0.684 0.96 0.99989 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.551 0.96 0.99994 1.00000
RegenerationR2 -0.15 0.96 0.97218 1.00000
RegenerationR3 2.08 0.96 0.38531 0.79322
RegenerationR4 1.976 0.96 0.38352 0.80369
RegenerationR5 -0.121 0.96 0.98025 1.00000
RegenerationR6 3.343 0.96 0.20326 0.54488
RegenerationBL 4.866 0.96 0.07187 0.31226
RegenerationTP 0.595 0.96 0.99990 1.00000


Genes with expression patterns similar to MligTC455_14260

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_14260 24 0.49 Mlig455_057199

Neo: Irradiation

Age: logFC(26M/2M)=0.576

 RARB 3 1.000 - - - 1.000 1.000 Mlig455_057199 {REF} {Length: 3614} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=107.2]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=49.7]} {Human: ENSG00000077092, RARB, retinoic acid receptor beta, [RH, Score=223, Expect=6e-67]; ENSG00000131759, RARA, retinoic acid receptor alpha, [RH, Score=219, Expect=3e-65]; ENSG00000172819, RARG, retinoic acid receptor gamma, [RH, Score=218, Expect=1e-65]} {Mouse: ENSMUSG00000017491, Rarb, retinoic acid receptor, beta, [RH, Score=222, Expect=7e-67]; ENSMUSG00000001288, Rarg, retinoic acid receptor, gamma, [RH, Score=218, Expect=3e-65]; ENSMUSG00000037992, Rara, retinoic acid receptor, alpha, [RH, Score=217, Expect=1e-64]} {Dmel: FBgn0000568, Eip75B, Ecdysone-induced protein 75B, [RH, Score=147, Expect=3e-37]} {Celegans: WBGene00004786, sex-1, Steroid hormone receptor family member cnr14, [Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [RH, Score=142, Expect=5e-37]} {RNA1310_25263} {RNA815_35184}
2. MligTC455_21245 53 1.1 Mlig455_007282

Neo: Irradiation

Age: -

Region-enriched R5: 4.319/0.03591

 1.84 0.962 - - - 0.878 - Mlig455_007282 {REF} {Length: 2015} {Pfam: SAP domain [PF02037.29, score=32.1]; Phage integrase family [PF00589.24, score=28.7]} {RNA1310_3424.1} {RNA815_32478}
3. MligTC455_16013 376 7.82 Mlig455_002828

Neo: Irradiation

Age: logFC(26M/2M)=0.279

Region-enriched R5: 3.139/0.00000

 CCDC102B 1.753 0.791 - - - 0.962 - Mlig455_002828 {REF} {Length: 3370} {TRANSSPLICED} {Human: ENSG00000150636, CCDC102B, coiled-coil domain containing 102B, [Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000063605, Ccdc102a, coiled-coil domain containing 102A, [Score=75.5, Expect=1e-13]} {Dmel: FBgn0051638, CG31638, [Score=89.7, Expect=3e-18]} {Celegans: WBGene00018763, F53F10.1, [Score=75.9, Expect=4e-15]} {Smed: dd_Smed_v6_13699_0_1, dd_Smed_v6_13699_0_1, [RH, Score=82.0, Expect=1e-16]} {RNA1509_8054} {RNA1310_7176} {RNA815_2237}
4. MligTC455_25108 274 5.7 Mlig455_007552

Neo: Germline

Age: Down-Up-Down

Region-enriched R5: 2.880/0.00012

 0.983 - - - - - 0.983 Mlig455_007552 {REF} {Length: 3123} {RNA1509_7988} {RNA1310_50308} {RNA815_8058.1}
5. MligTC455_18172 6 0.12 Mlig455_045435

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_045435 {REF} {Length: 965} {NoTransDecoderORF} {RNA1509_51264} {RNA1310_112128}
6. MligTC455_29398 20 0.42 Mlig455_060631

Neo: Int S/G2/M

Age: -

 RAPGEF2 0.977 - - - - - 0.977 Mlig455_060631 {REF} {Length: 3606} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=45.1]} {Human: ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [Score=132, Expect=1e-30]} {Mouse: ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [Score=132, Expect=9e-31]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [Score=111, Expect=1e-24]} {Smed: dd_Smed_v6_4950_0_4, dd_Smed_v6_4950_0_4, [Score=152, Expect=3e-37]} {RNA1509_46298} {RNA1310_2774.1} {RNA815_13348}
7. MligTC455_28617 96 2 Mlig455_023492, Mlig455_049195

Neo: -

Age: -

 RPIA 0.974 - - - - 0.974 -

Mlig455_023492 {REF} {Length: 6153} {Celegans: WBGene00021290, clec-122, C-type LECtin, [Score=50.8, Expect=6e-08]} {RNA1509_39265} {RNA1310_73176} {RNA815_35614}

Mlig455_049195 {REF} {Length: 2649} {Pfam: Ribose 5-phosphate isomerase A (phosphoriboisomerase A) [PF06026.16, score=60.7]} {Human: ENSG00000153574, RPIA, ribose 5-phosphate isomerase A, [Score=82.0, Expect=4e-20]} {Mouse: ENSMUSG00000053604, Rpia, ribose 5-phosphate isomerase A, [Score=79.3, Expect=3e-19]} {Dmel: FBgn0050410, Rpi, Ribose-5-phosphate isomerase, [Score=73.6, Expect=1e-17]} {Celegans: WBGene00015101, rpia-1, Probable-ribose 5-phosphate isomerase, [Score=67.0, Expect=3e-15]} {Smed: dd_Smed_v6_12956_0_2, dd_Smed_v6_12956_0_2, [Score=82.8, Expect=2e-21]} {RNA1509_39265} {RNA1310_63659} {RNA815_35614}
8. MligTC455_34534 168 3.5 Mlig455_049250

Neo: -

Age: -

 LITAF 0.972 - - - - 0.972 - Mlig455_049250 {REF} {Length: 1099} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=78.4]; SprT-like zinc ribbon domain [PF17283.4, score=19.2]} {Human: ENSG00000189067, LITAF, lipopolysaccharide induced TNF factor, [Score=75.1, Expect=8e-18]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=79.0, Expect=2e-19]} {Smed: dd_Smed_v6_26606_0_1, dd_Smed_v6_26606_0_1, [Score=74.3, Expect=9e-19]} {RNA1509_59268} {RNA1310_31303} {RNA815_15626.1}
9. MligTC455_04104 196 4.09 Mlig455_012083

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.482

Region-enriched R5: 2.703/0.00002

 TMEM201 0.968 - - - - - 0.968 Mlig455_012083 {REF} {Length: 4140} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=110.5]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=128, Expect=2e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=130, Expect=5e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=123, Expect=5e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=3e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=7e-25]} {RNA1509_19432} {RNA1310_12592, RNA1509_19432} {RNA1509_19432, RNA815_559.1}
10. MligTC455_44819 17 0.36 Mlig455_001006

Neo: -

Age: Up-Down-Up

 0.967 - - - - 0.967 - Mlig455_001006 {REF} {Length: 2627} {RNA1310_13211.1} {RNA815_63372}
11. MligTC455_20484 34 0.71 Mlig455_065789

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_065789 {REF} {Length: 1952} {NoTransDecoderORF} {RNA1509_59036} {RNA1310_140391} {RNA815_21157}
12. MligTC455_24674 48 1.01 Mlig455_008302, Mlig455_040564

Neo: -

Age: Down-Up-Up

 NUP85 0.962 - - - - 0.962 -

Mlig455_008302 {REF} {Length: 2809} {TRANSSPLICED} {Pfam: Nup85 Nucleoporin [PF07575.15, score=355.3]} {Human: ENSG00000125450, NUP85, nucleoporin 85, [RH, Score=303, Expect=3e-93]} {Mouse: ENSMUSG00000020739, Nup85, nucleoporin 85, [RH, Score=298, Expect=3e-91]} {Dmel: FBgn0034310, Nup75, Nucleoporin 75kD, [RH, Score=224, Expect=8e-64]} {Smed: dd_Smed_v6_6403_0_1, dd_Smed_v6_6403_0_1, [RH, Score=187, Expect=1e-50]} {RNA1509_16274} {RNA1310_10738} {RNA815_23975}

Mlig455_040564 {REF} {Length: 2815} {TRANSSPLICED} {Pfam: Nup85 Nucleoporin [PF07575.15, score=355.3]} {Human: ENSG00000125450, NUP85, nucleoporin 85, [RH, Score=303, Expect=3e-93]} {Mouse: ENSMUSG00000020739, Nup85, nucleoporin 85, [RH, Score=298, Expect=3e-91]} {Dmel: FBgn0034310, Nup75, Nucleoporin 75kD, [RH, Score=224, Expect=8e-64]} {Smed: dd_Smed_v6_6403_0_1, dd_Smed_v6_6403_0_1, [RH, Score=187, Expect=1e-50]} {RNA1509_16274} {RNA1310_10738} {RNA815_23975}
13. MligTC455_39903 11 0.24 Mlig455_000444, Mlig455_000505

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_000444 {REF} {Length: 578} {NoTransDecoderORF}

Mlig455_000505 {REF} {Length: 587} {NoTransDecoderORF}
14. MligTC455_04635 4 0.08 Mlig455_016315

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_016315 {REF} {Length: 1017} {RNA815_53445}
15. MligTC455_09684 20 0.41 Mlig455_021356

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_021356 {REF} {Length: 328} {NoTransDecoderORF} {RNA1310_113673}
16. MligTC455_47043 20 0.42 Mlig455_050126

Neo: -

Age: -

 ORC5 0.959 - - - - 0.959 - Mlig455_050126 {REF} {Length: 1766} {Pfam: Origin recognition complex (ORC) subunit 5 C-terminus [PF14630.8, score=58.3]; AAA ATPase domain [PF13191.8, score=40.7]; AAA domain [PF13401.8, score=23.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.5]} {Human: ENSG00000164815, ORC5, origin recognition complex subunit 5, [Score=50.4, Expect=3e-06]} {RNA1310_68186} {RNA815_35692.1}
17. MligTC455_38393 151 3.15 Mlig455_066602

Neo: -

Age: -

Region-enriched R6: 6.635/0.00000

 ADAMTS8 0.958 - - - - 0.958 - Mlig455_066602 {REF} {Length: 1768} {Pfam: Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=42.1]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=27.8]; Metallo-peptidase family M12 [PF13688.8, score=26.5]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=21.4]} {Human: ENSG00000134917, ADAMTS8, ADAM metallopeptidase with thrombospondin type 1 motif 8, [Score=59.3, Expect=9e-09]} {Mouse: ENSMUSG00000031994, Adamts8, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8, [Score=59.7, Expect=4e-09]} {Celegans: WBGene00020567, T19D2.1, [Score=66.2, Expect=2e-11]} {RNA1509_41739} {RNA1310_5612} {RNA815_2636.1}
18. MligTC455_12872 149 3.1 Mlig455_057561

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 1.624/0.04283

 0.957 - - - - - 0.957 Mlig455_057561 {REF} {Length: 1130} {RNA1509_29400} {RNA1310_15529} {RNA815_14251}
19. MligTC455_21628 55 1.15 Mlig455_024976

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_024976 {REF} {Length: 321} {NoTransDecoderORF} {RNA1509_51521} {RNA1310_102257} {RNA815_13536.2}
20. MligTC455_25363 32 0.66 Mlig455_013964

Neo: Int S/G2/M

Age: -

 HIST2H3C 0.957 - - - - - 0.957 Mlig455_013964 {REF} {Length: 1057} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=179.6]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=25.5]; CENP-S protein [PF15630.8, score=21.5]; PCNA-associated factor histone like domain [PF15715.7, score=21.0]} {Human: ENSG00000203811, HIST2H3C, histone cluster 2 H3 family member c, [RH, Score=271, Expect=4e-95]; ENSG00000183598, HIST2H3D, histone cluster 2 H3 family member d, [RH, Score=271, Expect=4e-95]; ENSG00000203852, HIST2H3A, histone cluster 2 H3 family member a, [RH, Score=271, Expect=4e-95]; ENSG00000275714, HIST1H3A, histone cluster 1 H3 family member a, [RH, Score=268, Expect=4e-94]; ENSG00000273983, HIST1H3G, histone cluster 1 H3 family member g, [RH, Score=268, Expect=4e-94]; ENSG00000278828, HIST1H3H, histone cluster 1 H3 family member h, [RH, Score=268, Expect=4e-94]; ENSG00000274267, HIST1H3B, histone cluster 1 H3 family member b, [RH, Score=268, Expect=4e-94]; ENSG00000197153, HIST1H3J, histone cluster 1 H3 family member j, [RH, Score=268, Expect=4e-94]; ENSG00000274750, HIST1H3E, histone cluster 1 H3 family member e, [RH, Score=268, Expect=4e-94]; ENSG00000275379, HIST1H3I, histone cluster 1 H3 family member i, [RH, Score=268, Expect=4e-94]; ENSG00000277775, HIST1H3F, histone cluster 1 H3 family member f, [RH, Score=268, Expect=4e-94]; ENSG00000278272, HIST1H3C, histone cluster 1 H3 family member c, [RH, Score=268, Expect=4e-94]; ENSG00000197409, HIST1H3D, histone cluster 1 H3 family member d, [RH, Score=268, Expect=4e-94]; ENSG00000163041, H3F3A, H3 histone family member 3A, [RH, Score=267, Expect=2e-93]; ENSG00000132475, H3F3B, H3 histone family member 3B, [RH, Score=267, Expect=2e-93]; ENSG00000168148, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000285435, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000203818, HIST2H3PS2, histone cluster 2 H3 pseudogene 2, [RH, Score=263, Expect=6e-92]} {Mouse: ENSMUSG00000081058, Hist2h3c2, histone cluster 2, H3c2, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069273, Hist1h3e, histone cluster 1, H3e, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069267, Hist1h3b, histone cluster 1, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000074403, Hist2h3b, histone cluster 2, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069310, Hist1h3c, histone cluster 1, H3c, [RH, Score=271, Expect=3e-95]; ENSMUSG00000100210, Hist1h3f, histone cluster 1, H3f, [RH, Score=271, Expect=3e-95]; ENSMUSG00000093769, Hist2h3c1, histone cluster 2, H3c1, [RH, Score=271, Expect=3e-95]; ENSMUSG00000099583, Hist1h3d, histone cluster 1, H3d, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069265, Hist1h3a, histone cluster 1, H3a, [RH, Score=268, Expect=2e-94]; ENSMUSG00000099517, Hist1h3g, histone cluster 1, H3g, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101972, Hist1h3i, histone cluster 1, H3i, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101355, Hist1h3h, histone cluster 1, H3h, [RH, Score=268, Expect=2e-94]; ENSMUSG00000016559, H3f3b, H3 histone, family 3B, [RH, Score=267, Expect=1e-93]; ENSMUSG00000060743, H3f3a, H3 histone, family 3A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0051613, His3:CG31613, [RH, Score=271, Expect=2e-95]} {Celegans: WBGene00001945, his-71, Histone H3.3 type 1, [RH, Score=266, Expect=9e-94]} {Smed: dd_Smed_v6_13347_0_1, dd_Smed_v6_13347_0_1, [RH, Score=271, Expect=1e-95]} {RNA1509_45151} {RNA1310_41986.1} {RNA815_19717.2}
21. MligTC455_01233 64 1.33 Mlig455_054264

Neo: -

Age: -

Region-enriched R6: 7.099/0.03616

 0.954 - - - - 0.954 - Mlig455_054264 {REF} {Length: 486} {RNA1509_51755} {RNA1310_25050.1} {RNA815_12951}
22. MligTC455_15419 31 0.65 Mlig455_041511

Neo: Irradiation

Age: Down-Up-Up

 0.954 0.954 - - - - - Mlig455_041511 {REF} {Length: 1060} {RNA1509_50501, RNA1509_52389} {RNA1310_37100, RNA1509_50501, RNA1509_52389} {RNA1509_50501, RNA1509_52389, RNA815_34228.2}
23. MligTC455_18929 215 4.48 Mlig455_006110

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.114

Region-enriched R4: 3.627/0.00001

 ACOT8 0.953 - - - - 0.953 - Mlig455_006110 {REF} {Length: 2536} {TRANSSPLICED} {Pfam: Thioesterase-like superfamily [PF13622.8, score=172.5]; Acyl-CoA thioesterase [PF02551.17, score=58.0]} {Human: ENSG00000101473, ACOT8, acyl-CoA thioesterase 8, [Score=132, Expect=1e-35]} {Mouse: ENSMUSG00000017307, Acot8, acyl-CoA thioesterase 8, [Score=141, Expect=5e-39]} {Celegans: WBGene00017781, F25E2.3, [RH, Score=130, Expect=3e-35]} {Smed: dd_Smed_v6_10206_0_1, dd_Smed_v6_10206_0_1, [RH, Score=124, Expect=4e-33]} {RNA1509_18155, RNA1509_38008, RNA1509_52910} {RNA1310_30891, RNA1509_18155, RNA1509_38008, RNA1509_52910} {RNA1509_18155, RNA1509_38008, RNA1509_52910, RNA815_14445}
24. MligTC455_23994 93 1.95 Mlig455_048700

Neo: -

Age: -

 KDM6A 0.953 - - - - - 0.953 Mlig455_048700 {REF} {Length: 4708} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=104.2]; WD domain, G-beta repeat [PF00400.34, score=45.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=19.3]} {Human: ENSG00000147050, KDM6A, lysine demethylase 6A, [RH, Score=586, Expect=0.0]; ENSG00000183878, UTY, ubiquitously transcribed tetratricopeptide repeat containing, Y-linked, [RH, Score=577, Expect=0.0]; ENSG00000132510, KDM6B, lysine demethylase 6B, [RH, Score=560, Expect=4e-175]} {Mouse: ENSMUSG00000037369, Kdm6a, lysine (K)-specific demethylase 6A, [RH, Score=589, Expect=0.0]; ENSMUSG00000018476, Kdm6b, KDM1 lysine (K)-specific demethylase 6B, [RH, Score=560, Expect=9e-176]} {Dmel: FBgn0260749, Utx, Utx histone demethylase, [Score=590, Expect=0.0]} {Celegans: WBGene00017046, utx-1, UTX (Ubiquitously transcribed TPR on X) homolog, [RH, Score=422, Expect=9e-129]} {Smed: dd_Smed_v6_5837_0_1, dd_Smed_v6_5837_0_1, [RH, Score=565, Expect=0.0]} {RNA1509_48790} {RNA1310_10269.1} {RNA815_1846}
25. MligTC455_29117 24 0.51 Mlig455_057180

Neo: -

Age: logFC(26M/2M)=2.473

 0.953 - - - - 0.953 - Mlig455_057180 {REF} {Length: 3369} {Pfam: CUB domain [PF00431.22, score=88.0]; Domain of unknown function (DUF4744) [PF15918.7, score=65.2]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=56.6, Expect=2e-07]} {RNA1509_33410} {RNA1310_33183} {RNA815_39690}
26. MligTC455_43041 13 0.26 Mlig455_062479

Neo: -

Age: Down-Up-Up

 0.953 - - - - 0.953 - Mlig455_062479 {REF} {Length: 1904} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=87.8, Expect=4e-20]} {RNA1310_19254} {RNA815_11059}
27. MligTC455_01232 74 1.55 Mlig455_016220

Neo: -

Age: -

Region-enriched R6: 7.177/0.02790

 0.952 - - - - 0.952 - Mlig455_016220 {REF} {Length: 1235} {RNA1509_51755, RNA1509_9784} {RNA1310_25050.2, RNA1509_9784} {RNA1509_9784, RNA815_12951}
28. MligTC455_33823 22 0.45 Mlig455_015132, Mlig455_037776

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_015132 {REF} {Length: 409} {NoTransDecoderORF} {RNA1310_39704} {RNA815_51915}

Mlig455_037776 {REF} {Length: 423} {NoTransDecoderORF} {RNA1310_39704} {RNA815_51915}
29. MligTC455_43039 6 0.12 Mlig455_062477

Neo: -

Age: Down-Down-Up

 0.951 - - - - 0.951 - Mlig455_062477 {REF} {Length: 1058} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=97.4, Expect=7e-24]} {RNA1310_19875} {RNA815_11059}
30. MligTC455_14561 13 0.27 Mlig455_034012

Neo: -

Age: -

 SCNN1G 0.95 - - - - 0.950 - Mlig455_034012 {REF} {Length: 2646} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.5]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=95.1, Expect=7e-20]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=92.8, Expect=3e-19]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=87.0, Expect=8e-18]} {Smed: dd_Smed_v6_19727_0_1, dd_Smed_v6_19727_0_1, [Score=119, Expect=4e-28]} {RNA1310_62957} {RNA815_39090}
31. MligTC455_17933 26 0.54 Mlig455_006081, Mlig455_068032

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_006081 {REF} {Length: 1840} {TRANSSPLICED} {Pfam: Thioesterase-like superfamily [PF13622.8, score=77.8]; Acyl-CoA thioesterase [PF02551.17, score=25.0]} {Celegans: WBGene00017781, F25E2.3, [Score=75.1, Expect=6e-15]} {RNA1509_31100} {RNA1310_25213} {RNA815_49205}

Mlig455_068032 {REF} {Length: 1653} {NoTransDecoderORF} {RNA1509_31100} {RNA1310_25213} {RNA815_22533}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA