M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_21899

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_21899 846 17.63 Mlig455_040017

Neo: -

Age: -

 AK2 Mlig455_040017 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=127.9]; AAA domain [PF13207.8, score=69.2]; Adenylate kinase, active site lid [PF05191.16, score=45.0]; AAA domain [PF13671.8, score=25.6]; Cytidylate kinase [PF02224.20, score=20.0]} {Human: ENSG00000004455, AK2, adenylate kinase 2, [Score=196, Expect=2e-62]} {Mouse: ENSMUSG00000028792, Ak2, adenylate kinase 2, [Score=189, Expect=3e-60]} {Dmel: FBgn0283494, Adk2, Adenylate kinase 2, [Score=194, Expect=4e-62]} {Celegans: WBGene00002879, let-754, Adenylate kinase, [Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_3290_0_1, dd_Smed_v6_3290_0_1, [Score=191, Expect=2e-61]} {RNA1509_23430} {RNA1310_35054} {RNA815_20286}

Cumulative graph for MligTC455_21899

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.133 4.236 0.88125 1.00000
RegionR2 -0.572 4.236 0.21055 0.57474
RegionR3 0.263 4.236 0.47261 0.97803
RegionR4 1.101 4.236 0.01541 0.08423
RegionR5 0.942 4.236 0.00701 0.04462
RegionR6 0.151 4.236 0.69515 1.00000
RegionR7 -0.04 4.236 0.92894 1.00000
RegionR8 -1.712 4.236 0.01103 0.19936

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.84 4.236 0.22076 0.95537
RegenerationR2 -0.418 4.236 0.32572 0.76381
RegenerationR3 -0.597 4.236 0.18273 0.61877
RegenerationR4 -0.781 4.236 0.09423 0.47829
RegenerationR5 -0.844 4.236 0.04900 0.35779
RegenerationR6 -0.905 4.236 0.05384 0.29080
RegenerationBL -0.796 4.236 0.17655 0.50430
RegenerationTP -0.104 4.236 0.86625 1.00000


Genes with expression patterns similar to MligTC455_21899

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_21899 846 17.63 Mlig455_040017

Neo: -

Age: -

 AK2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_040017 {REF} {Length: 1681} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=127.9]; AAA domain [PF13207.8, score=69.2]; Adenylate kinase, active site lid [PF05191.16, score=45.0]; AAA domain [PF13671.8, score=25.6]; Cytidylate kinase [PF02224.20, score=20.0]} {Human: ENSG00000004455, AK2, adenylate kinase 2, [Score=196, Expect=2e-62]} {Mouse: ENSMUSG00000028792, Ak2, adenylate kinase 2, [Score=189, Expect=3e-60]} {Dmel: FBgn0283494, Adk2, Adenylate kinase 2, [Score=194, Expect=4e-62]} {Celegans: WBGene00002879, let-754, Adenylate kinase, [Score=207, Expect=4e-67]} {Smed: dd_Smed_v6_3290_0_1, dd_Smed_v6_3290_0_1, [Score=191, Expect=2e-61]} {RNA1509_23430} {RNA1310_35054} {RNA815_20286}
2. MligTC455_35007 995 20.72 Mlig455_067944

Neo: -

Age: -

 2.672 - 0.864 0.963 0.845 - - Mlig455_067944 {REF} {Length: 5148} {TRANSSPLICED} {Pfam: PIH1 CS-like domain [PF18201.3, score=24.2]} {Smed: dd_Smed_v6_9306_0_1, dd_Smed_v6_9306_0_1, [RH, Score=51.6, Expect=3e-07]} {RNA1509_25123} {RNA1310_13149.1, RNA1509_25123} {RNA1509_25123, RNA815_11266}
3. MligTC455_29017 47593 991.52 Mlig455_023273

Neo: -

Age: Down-Down-Up

 2.529 - 0.766 0.955 0.808 - - Mlig455_023273 {REF} {Length: 3896} {RNA1509_17773} {RNA1310_10858} {RNA815_5446.1}
4. MligTC455_43281 537 11.18 Mlig455_007250

Neo: -

Age: -

 MYO1D 1.836 - 0.963 0.873 - - - Mlig455_007250 {REF} {Length: 2464} {Pfam: Myosin head (motor domain) [PF00063.23, score=730.2]; AAA ATPase domain [PF13191.8, score=20.2]} {Human: ENSG00000176658, MYO1D, myosin ID, [RH, Score=800, Expect=0.0]} {Mouse: ENSMUSG00000035441, Myo1d, myosin ID, [RH, Score=791, Expect=0.0]; ENSMUSG00000020437, Myo1g, myosin IG, [RH, Score=765, Expect=0.0]} {Dmel: FBgn0086347, Myo31DF, Myosin 31DF, [RH, Score=787, Expect=0.0]} {Celegans: WBGene00002038, hum-5, Heavy chain, Unconventional Myosin; Myosin IA, [RH, Score=786, Expect=0.0]} {Smed: dd_Smed_v6_3957_0_1, dd_Smed_v6_3957_0_1, [RH, Score=857, Expect=0.0]} {RNA1509_24014} {RNA1310_3309} {RNA815_4375}
5. MligTC455_07531 381 7.95 Mlig455_058950

Neo: -

Age: Down-Up-Down

 TSEN34 1.816 - 0.967 0.849 - - - Mlig455_058950 {REF} {Length: 2609} {Pfam: tRNA intron endonuclease, catalytic C-terminal domain [PF01974.19, score=47.1]} {Human: ENSG00000278605, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000278622, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000170892, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000273896, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274796, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274129, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274672, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000278712, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000274078, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]; ENSG00000275165, TSEN34, tRNA splicing endonuclease subunit 34, [Score=69.3, Expect=6e-13]} {Mouse: ENSMUSG00000035585, Tsen34, tRNA splicing endonuclease subunit 34, [Score=70.1, Expect=3e-13]} {Dmel: FBgn0053260, CG33260, [RH, Score=67.8, Expect=9e-13]} {Smed: dd_Smed_v6_4610_1_4, dd_Smed_v6_4610_1_4, [Score=72.4, Expect=2e-14]} {RNA1509_35637} {RNA1310_8022.1, RNA1509_35637} {RNA1509_35637, RNA815_9502.1}
6. MligTC455_28350 662 13.79 Mlig455_067530

Neo: -

Age: Down-Up-Down

 RCCD1 1.811 - - 0.956 0.855 - - Mlig455_067530 {REF} {Length: 2354} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=87.0]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=53.3]} {Human: ENSG00000166965, RCCD1, RCC1 domain containing 1, [RH, Score=97.8, Expect=2e-22]} {Mouse: ENSMUSG00000038930, Rccd1, RCC1 domain containing 1, [RH, Score=98.6, Expect=1e-22]} {Dmel: FBgn0038917, CG6678, [RH, Score=86.7, Expect=9e-19]} {Celegans: WBGene00010768, K11D2.1, [RH, Score=76.6, Expect=4e-16]} {Smed: dd_Smed_v6_4912_0_1, dd_Smed_v6_4912_0_1, [RH, Score=96.3, Expect=2e-22]} {RNA1509_26302} {RNA1310_19707, RNA1509_26302} {RNA1509_26302, RNA815_10526}
7. MligTC455_25874 465 9.69 Mlig455_002801

Neo: -

Age: -

 PPP6R3 1.748 0.796 - - 0.952 - - Mlig455_002801 {REF} {Length: 5109} {TRANSSPLICED} {Pfam: SIT4 phosphatase-associated protein [PF04499.17, score=152.6]} {Human: ENSG00000110075, PPP6R3, protein phosphatase 6 regulatory subunit 3, [RH, Score=326, Expect=3e-97]; ENSG00000100239, PPP6R2, protein phosphatase 6 regulatory subunit 2, [RH, Score=312, Expect=1e-91]} {Mouse: ENSMUSG00000024908, Ppp6r3, protein phosphatase 6, regulatory subunit 3, [RH, Score=327, Expect=7e-98]} {Dmel: FBgn0035688, CG10289, [RH, Score=206, Expect=1e-54]} {Celegans: WBGene00008166, saps-1, SAPS (Phosphatase associated) domain protein, [RH, Score=73.6, Expect=4e-13]} {Smed: dd_Smed_v6_2215_0_1, dd_Smed_v6_2215_0_1, [RH, Score=125, Expect=5e-29]} {RNA1509_59231, RNA1509_6659} {RNA1310_4346.1, RNA1509_59231} {RNA1509_59231, RNA815_12593}
8. MligTC455_26783 939 19.57 Mlig455_050944

Neo: -

Age: Down-Down-Up

 RBCK1 1.702 - - 0.740 0.962 - - Mlig455_050944 {REF} {Length: 2291} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=29.6]; Zn-finger in Ran binding protein and others [PF00641.20, score=25.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.3]} {Human: ENSG00000125826, RBCK1, RANBP2-type and C3HC4-type zinc finger containing 1, [RH, Score=270, Expect=4e-84]} {Mouse: ENSMUSG00000027466, Rbck1, RanBP-type and C3HC4-type zinc finger containing 1, [RH, Score=273, Expect=4e-85]} {Celegans: WBGene00013270, Y57A10A.31, [Score=71.2, Expect=8e-13]} {Smed: dd_Smed_v6_1293_0_1, dd_Smed_v6_1293_0_1, [RH, Score=272, Expect=6e-86]} {RNA1509_15860, RNA1509_23103, RNA1509_25491, RNA1509_46532, RNA1509_46992} {RNA1310_18951, RNA1509_15860, RNA1509_23103, RNA1509_25491, RNA1509_46532, RNA1509_46992} {RNA1509_15860, RNA1509_23103, RNA1509_25491, RNA1509_46532, RNA1509_46992, RNA815_7754.1}
9. MligTC455_52169 1034 21.54 Mlig455_002488, Mlig455_002678

Neo: Neoblast

Age: logFC(26M/2M)=0.250

 1.668 - 0.951 - - - 0.717

Mlig455_002488 {REF} {Length: 1882} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=76.2]; Complex1_LYR-like [PF13233.8, score=45.5]; Complex1_LYR-like [PF13232.8, score=24.1]} {Dmel: FBgn0013432, bcn92, [RH, Score=69.7, Expect=4e-17]} {RNA1509_14359} {RNA1310_30074.1} {RNA815_34548}

Mlig455_002678 {REF} {Length: 2159} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=76.2]; Complex1_LYR-like [PF13233.8, score=45.5]; Complex1_LYR-like [PF13232.8, score=24.1]} {Dmel: FBgn0013432, bcn92, [RH, Score=69.7, Expect=4e-17]} {RNA1509_14359, RNA1509_30735, RNA1509_34248} {RNA1310_30074.1, RNA1509_14359, RNA1509_30735, RNA1509_34248} {RNA1509_14359, RNA1509_30735, RNA1509_34248, RNA815_34548}
10. MligTC455_51483 766 15.96 Mlig455_059804

Neo: -

Age: -

 CEP41 1.665 0.703 - - 0.962 - - Mlig455_059804 {REF} {Length: 2149} {Pfam: Rhodanese-like domain [PF00581.22, score=38.5]} {Human: ENSG00000106477, CEP41, centrosomal protein 41, [RH, Score=226, Expect=2e-70]} {Mouse: ENSMUSG00000029790, Cep41, centrosomal protein 41, [RH, Score=224, Expect=5e-70]} {Smed: dd_Smed_v6_9621_0_1, dd_Smed_v6_9621_0_1, [RH, Score=291, Expect=2e-96]} {RNA1509_35704} {RNA1310_25102.2} {RNA815_9742}
11. MligTC455_12926 878 18.29 Mlig455_035850

Neo: -

Age: -

 MICU1 0.975 - - 0.975 - - - Mlig455_035850 {REF} {Length: 2774} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=35.0]; EF-hand domain pair [PF13833.8, score=30.6]; EF-hand domain [PF13405.8, score=29.0]; EF-hand domain pair [PF13499.8, score=26.4]; EF hand [PF13202.8, score=24.9]} {Human: ENSG00000107745, MICU1, mitochondrial calcium uptake 1, [RH, Score=405, Expect=1e-136]} {Mouse: ENSMUSG00000020111, Micu1, mitochondrial calcium uptake 1, [RH, Score=410, Expect=1e-138]} {Dmel: FBgn0031893, MICU1, Mitochondrial calcium uptake 1, [RH, Score=397, Expect=4e-133]} {Celegans: WBGene00013462, micu-1, Calcium uptake protein 1 homolog, mitochondrial, [RH, Score=348, Expect=3e-114]} {Smed: dd_Smed_v6_3581_0_1, dd_Smed_v6_3581_0_1, [RH, Score=462, Expect=8e-159]} {RNA1509_25271, RNA1509_33664, RNA1509_35490, RNA1509_40235, RNA1509_5003, RNA1509_53882} {RNA1310_8074, RNA1509_25271, RNA1509_33664, RNA1509_35490, RNA1509_40235, RNA1509_5003, RNA1509_53882} {RNA1509_25271, RNA1509_33664, RNA1509_35490, RNA1509_40235, RNA1509_5003, RNA1509_53882, RNA815_3471.1}
12. MligTC455_29541 402 8.37 Mlig455_063794

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.426

 0.966 - - 0.966 - - - Mlig455_063794 {REF} {Length: 3462} {TRANSSPLICED} {RNA1310_21809} {RNA815_37693}
13. MligTC455_35655 762 15.88 Mlig455_031472

Neo: -

Age: -

Region-enriched R4: 1.318/0.01793

 WIPI2 0.966 - - - 0.966 - - Mlig455_031472 {REF} {Length: 4154} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=83.3]} {Human: ENSG00000157954, WIPI2, WD repeat domain, phosphoinositide interacting 2, [RH, Score=388, Expect=2e-128]} {Mouse: ENSMUSG00000029578, Wipi2, WD repeat domain, phosphoinositide interacting 2, [RH, Score=390, Expect=4e-129]} {Dmel: FBgn0035850, Atg18a, Autophagy-related 18a, [RH, Score=361, Expect=6e-118]} {Celegans: WBGene00018294, atg-18, AuTophaGy (Yeast Atg homolog), [RH, Score=275, Expect=3e-85]} {Smed: dd_Smed_v6_8524_0_1, dd_Smed_v6_8524_0_1, [RH, Score=238, Expect=8e-71]} {RNA1509_55788} {RNA1310_2633, RNA1509_55788} {RNA1509_55788, RNA815_5306}
14. MligTC455_42412 539 11.22 Mlig455_009847

Neo: -

Age: -

 RAB21 0.966 - - 0.966 - - - Mlig455_009847 {REF} {Length: 2226} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=178.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=119.9]; ADP-ribosylation factor family [PF00025.23, score=45.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.4]} {Human: ENSG00000080371, RAB21, RAB21, member RAS oncogene family, [RH, Score=265, Expect=6e-90]} {Mouse: ENSMUSG00000020132, Rab21, RAB21, member RAS oncogene family, [RH, Score=266, Expect=8e-91]} {Dmel: FBgn0039966, Rab21, [Score=213, Expect=7e-70]} {Celegans: WBGene00004279, rab-21, RAB family, [RH, Score=200, Expect=5e-65]} {Smed: dd_Smed_v6_1863_0_1, dd_Smed_v6_1863_0_1, [Score=209, Expect=6e-69]} {RNA1509_29028, RNA1509_33419, RNA1509_41909} {RNA1310_17759, RNA1509_29028, RNA1509_33419, RNA1509_41909} {RNA1509_29028, RNA1509_33419, RNA1509_41909, RNA815_10475.1}
15. MligTC455_44492 578 12.04 Mlig455_018449

Neo: -

Age: logFC(26M/2M)=-0.475

Region-enriched R5: 1.214/0.02706

 GYG2 0.966 - 0.966 - - - - Mlig455_018449 {REF} {Length: 3452} {TRANSSPLICED} {Pfam: Glycosyl transferase family 8 [PF01501.22, score=50.0]; Nucleotide-diphospho-sugar transferase [PF03407.18, score=21.0]} {Human: ENSG00000056998, GYG2, glycogenin 2, [Score=192, Expect=4e-53]; ENSG00000163754, GYG1, glycogenin 1, [Score=183, Expect=1e-51]} {Mouse: ENSMUSG00000019528, Gyg, glycogenin, [Score=181, Expect=6e-51]} {Dmel: FBgn0265191, Glycogenin, [Score=183, Expect=9e-52]} {Celegans: WBGene00012020, gyg-2, GlYcoGenin like, [Score=143, Expect=5e-38]} {Smed: dd_Smed_v6_647_1_1, dd_Smed_v6_647_1_1, [Score=190, Expect=6e-55]} {RNA1509_21977} {RNA1310_9192} {RNA815_6477}
16. MligTC455_06847 632 13.17 Mlig455_021833

Neo: -

Age: logFC(26M/2M)=-0.278

Region-enriched R3: 1.828/0.00930

 MAST4 0.965 - - - 0.965 - - Mlig455_021833 {REF} {Length: 5984} {Pfam: Domain of unknown function (DUF1908) [PF08926.13, score=233.5]; Protein kinase domain [PF00069.27, score=197.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=82.4]; ABC1 atypical kinase-like domain [PF03109.18, score=24.3]; PDZ domain [PF17820.3, score=23.4]; Phosphotransferase enzyme family [PF01636.25, score=22.2]; Kinase-like [PF14531.8, score=17.9]} {Human: ENSG00000069020, MAST4, microtubule associated serine/threonine kinase family member 4, [RH, Score=664, Expect=0.0]; ENSG00000086015, MAST2, microtubule associated serine/threonine kinase 2, [RH, Score=664, Expect=0.0]; ENSG00000099308, MAST3, microtubule associated serine/threonine kinase 3, [RH, Score=636, Expect=0.0]} {Mouse: ENSMUSG00000034751, Mast4, microtubule associated serine/threonine kinase family member 4, [RH, Score=663, Expect=0.0]; ENSMUSG00000003810, Mast2, microtubule associated serine/threonine kinase 2, [RH, Score=663, Expect=0.0]} {Dmel: FBgn0267390, dop, drop out, [RH, Score=502, Expect=8e-149]} {Celegans: WBGene00002192, kin-4, KIN-4 protein; Protein KINase, [RH, Score=596, Expect=0.0]} {Smed: dd_Smed_v6_2028_0_1, dd_Smed_v6_2028_0_1, [Score=649, Expect=0.0]} {RNA1509_23083, RNA1509_4612, RNA1509_52145} {RNA1310_726.1, RNA1509_23083, RNA1509_4612, RNA1509_52145} {RNA1509_23083, RNA1509_4612, RNA1509_52145, RNA815_4601}
17. MligTC455_26648 1949 40.61 Mlig455_070747

Neo: -

Age: -

 LCP1 0.965 - - - 0.965 - - Mlig455_070747 {REF} {Length: 3765} {Pfam: Calponin homology (CH) domain [PF00307.33, score=224.7]; CAMSAP CH domain [PF11971.10, score=31.8]; CH-like domain in sperm protein [PF06294.13, score=18.9]} {Human: ENSG00000136167, LCP1, lymphocyte cytosolic protein 1, [Score=458, Expect=2e-153]; ENSG00000102024, PLS3, plastin 3, [Score=458, Expect=2e-153]} {Mouse: ENSMUSG00000021998, Lcp1, lymphocyte cytosolic protein 1, [Score=468, Expect=2e-157]; ENSMUSG00000016382, Pls3, plastin 3 (T-isoform), [Score=455, Expect=1e-152]} {Dmel: FBgn0024238, Fim, Fimbrin, [Score=490, Expect=6e-166]} {Celegans: WBGene00022425, plst-1, PLaSTin (Actin bundling protein) homolog, [Score=324, Expect=2e-105]} {Smed: dd_Smed_v6_749_0_1, dd_Smed_v6_749_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_11281} {RNA1310_4740.1} {RNA815_1268.1}
18. MligTC455_10562 356 7.42 Mlig455_023642

Neo: -

Age: -

 RRAGC 0.964 - 0.964 - - - - Mlig455_023642 {REF} {Length: 3636} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=210.6]; ADP-ribosylation factor family [PF00025.23, score=31.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000116954, RRAGC, Ras related GTP binding C, [RH, Score=409, Expect=2e-140]; ENSG00000025039, RRAGD, Ras related GTP binding D, [RH, Score=399, Expect=1e-136]} {Mouse: ENSMUSG00000028646, Rragc, Ras-related GTP binding C, [RH, Score=408, Expect=2e-140]; ENSMUSG00000028278, Rragd, Ras-related GTP binding D, [RH, Score=399, Expect=5e-137]} {Dmel: FBgn0033272, RagC-D, Ras-related GTP binding C/D, [RH, Score=400, Expect=2e-137]} {Celegans: WBGene00012497, ragc-1, RAs-related GTP binding protein C homolog, [RH, Score=283, Expect=1e-92]} {Smed: dd_Smed_v6_5653_0_1, dd_Smed_v6_5653_0_1, [RH, Score=419, Expect=2e-145]} {RNA1509_9291} {RNA1310_15858.1} {RNA815_8637}
19. MligTC455_26647 1908 39.76 Mlig455_057976

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.392

 PLS3 0.963 - - - 0.963 - - Mlig455_057976 {REF} {Length: 2950} {Pfam: Calponin homology (CH) domain [PF00307.33, score=223.9]; CAMSAP CH domain [PF11971.10, score=31.8]; CH-like domain in sperm protein [PF06294.13, score=19.1]} {Human: ENSG00000102024, PLS3, plastin 3, [Score=459, Expect=7e-154]; ENSG00000136167, LCP1, lymphocyte cytosolic protein 1, [Score=457, Expect=4e-153]} {Mouse: ENSMUSG00000021998, Lcp1, lymphocyte cytosolic protein 1, [Score=467, Expect=4e-157]; ENSMUSG00000016382, Pls3, plastin 3 (T-isoform), [Score=456, Expect=9e-153]} {Dmel: FBgn0024238, Fim, Fimbrin, [Score=488, Expect=4e-165]} {Celegans: WBGene00022425, plst-1, PLaSTin (Actin bundling protein) homolog, [Score=322, Expect=1e-104]} {Smed: dd_Smed_v6_749_0_1, dd_Smed_v6_749_0_1, [RH, Score=590, Expect=0.0]} {RNA1509_11281} {RNA1310_4740.1} {RNA815_1268.1}
20. MligTC455_38914 968 20.18 Mlig455_062372

Neo: -

Age: -

Region-enriched R4: 1.793/0.02795
Region-enriched R5: 1.553/0.02946

 ARAP1 0.963 - - - 0.963 - - Mlig455_062372 {REF} {Length: 5168} {TRANSSPLICED} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=97.2]; RhoGAP domain [PF00620.29, score=92.5]; PH domain [PF00169.31, score=30.9]} {Human: ENSG00000186635, ARAP1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=126, Expect=1e-28]} {Mouse: ENSMUSG00000032812, Arap1, ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1, [RH, Score=116, Expect=1e-25]} {Dmel: FBgn0028509, CenG1A, Centaurin gamma 1A, [Score=84.0, Expect=6e-16]} {Celegans: WBGene00000565, cnt-1, Arf-GAP with ANK repeat and PH domain-containing protein cnt-1 Truncated ctn-1, [Score=75.9, Expect=1e-13]} {Smed: dd_Smed_v6_8255_0_1, dd_Smed_v6_8255_0_1, [RH, Score=100, Expect=4e-21]} {RNA1509_13429, RNA1509_29864, RNA1509_6804} {RNA1310_1934.1, RNA1509_13429, RNA1509_29864, RNA1509_6804} {RNA1509_13429, RNA1509_29864, RNA1509_6804, RNA815_698.1}
21. MligTC455_40788 442 9.2 Mlig455_048951

Neo: -

Age: -

 SUZ12 0.96 - - 0.960 - - - Mlig455_048951 {REF} {Length: 2627} {TRANSSPLICED} {Pfam: VEFS-Box of polycomb protein [PF09733.11, score=116.0]} {Human: ENSG00000178691, SUZ12, SUZ12, polycomb repressive complex 2 subunit, [RH, Score=250, Expect=2e-72]} {Mouse: ENSMUSG00000017548, Suz12, SUZ12 polycomb repressive complex 2 subunit, [RH, Score=253, Expect=1e-73]} {Dmel: FBgn0020887, Su(z)12, [RH, Score=187, Expect=1e-49]} {Smed: dd_Smed_v6_12930_0_1, dd_Smed_v6_12930_0_1, [RH, Score=193, Expect=3e-53]} {RNA1509_42645} {RNA1310_6938, RNA1509_42645} {RNA1509_42645, RNA815_5348}
22. MligTC455_12534 1611 33.55 Mlig455_046860

Neo: Int S/G2/M

Age: -

 NOP53 0.959 - - 0.959 - - - Mlig455_046860 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Nop53 (60S ribosomal biogenesis) [PF07767.13, score=161.6]} {Human: ENSG00000105373, NOP53, NOP53 ribosome biogenesis factor, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000041560, Nop53, NOP53 ribosome biogenesis factor, [RH, Score=117, Expect=2e-28]} {Dmel: FBgn0030061, CG1785, [RH, Score=82.4, Expect=1e-16]} {Celegans: WBGene00012692, Y39B6A.33, [RH, Score=53.9, Expect=1e-07]} {RNA1509_22656, RNA1509_4085} {RNA1310_16335, RNA1509_22656, RNA1509_4085} {RNA1509_22656, RNA1509_4085, RNA815_6216}
23. MligTC455_15962 394 8.22 Mlig455_016102

Neo: Irradiation

Age: -

Region-enriched R5: 1.799/0.00090

 MIB2 0.959 - 0.959 - - - - Mlig455_016102 {REF} {Length: 4719} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=169.0]; Mib_herc2 [PF06701.15, score=160.9]; Ankyrin repeats (many copies) [PF13637.8, score=122.9]; Ankyrin repeats (many copies) [PF13857.8, score=111.6]; Ankyrin repeat [PF00023.32, score=102.2]; Ankyrin repeat [PF13606.8, score=86.2]; Mind bomb SH3 repeat domain [PF18346.3, score=81.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=60.4]; Zinc finger, ZZ type [PF00569.19, score=22.2]} {Human: ENSG00000197530, MIB2, mindbomb E3 ubiquitin protein ligase 2, [RH, Score=564, Expect=0.0]} {Mouse: ENSMUSG00000029060, Mib2, mindbomb E3 ubiquitin protein ligase 2, [RH, Score=493, Expect=8e-159]} {Dmel: FBgn0086442, mib2, mind bomb 2, [RH, Score=555, Expect=0.0]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=124, Expect=2e-28]} {Smed: dd_Smed_v6_6104_0_2, dd_Smed_v6_6104_0_2, [Score=275, Expect=1e-76]} {RNA1509_12439} {RNA1310_3959.1, RNA1509_12439} {RNA1509_12439, RNA815_13244}
24. MligTC455_36118 8835 184.05 Mlig455_045360

Neo: -

Age: -

 TMBIM6 0.959 - - - 0.959 - - Mlig455_045360 {REF} {Length: 2231} {TRANSSPLICED} {Pfam: Inhibitor of apoptosis-promoting Bax1 [PF01027.22, score=116.1]} {Human: ENSG00000139644, TMBIM6, transmembrane BAX inhibitor motif containing 6, [RH, Score=133, Expect=1e-37]} {Mouse: ENSMUSG00000023010, Tmbim6, transmembrane BAX inhibitor motif containing 6, [RH, Score=142, Expect=2e-41]} {Dmel: FBgn0035871, BI-1, Bax Inhibitor-1, [RH, Score=123, Expect=4e-34]} {Smed: dd_Smed_v6_319_0_1, dd_Smed_v6_319_0_1, [RH, Score=165, Expect=7e-51]} {RNA1509_14502, RNA1509_59844} {RNA1310_27138, RNA1509_59844} {RNA1509_59844, RNA815_14503}
25. MligTC455_44122 2079 43.3 Mlig455_055744, Mlig455_070953

Neo: -

Age: -

Regeneration-enriched R6: 1.876
Regeneration-enriched R3: 1.808

 RSF1 0.959 - - 0.959 - - -

Mlig455_055744 {REF} {Length: 6660} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.2]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=121, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=8e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=51.2, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=176, Expect=2e-44]} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA1509_8688} {RNA1310_1065.1, RNA1509_45252, RNA1509_58055, RNA1509_8090} {RNA1509_45252, RNA1509_58055, RNA1509_8090, RNA815_778.1}

Mlig455_070953 {REF} {Length: 6596} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=34.3]} {Human: ENSG00000048649, RSF1, remodeling and spacing factor 1, [RH, Score=124, Expect=6e-28]} {Mouse: ENSMUSG00000035623, Rsf1, remodeling and spacing factor 1, [RH, Score=122, Expect=4e-27]} {Dmel: FBgn0026577, CG8677, [RH, Score=114, Expect=7e-25]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_3984_0_1, dd_Smed_v6_3984_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_45252} {RNA1310_1065.1} {RNA815_778.1}
26. MligTC455_49541 255 5.31 Mlig455_052626

Neo: -

Age: Down-Down-Up

 KLHL12 0.959 - 0.959 - - - - Mlig455_052626 {REF} {Length: 3902} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=209.7]; Kelch motif [PF13964.8, score=137.5]; BTB/POZ domain [PF00651.33, score=108.3]; BTB And C-terminal Kelch [PF07707.17, score=101.5]; Galactose oxidase, central domain [PF13418.8, score=74.8]; Kelch motif [PF07646.17, score=69.4]; Galactose oxidase, central domain [PF13415.8, score=67.1]; Kelch motif [PF13854.8, score=36.4]} {Human: ENSG00000117153, KLHL12, kelch like family member 12, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0040230, dbo, diablo, [Score=373, Expect=2e-121]} {Celegans: WBGene00020030, R12E2.1, [Score=352, Expect=1e-113]} {Smed: dd_Smed_v6_7304_0_1, dd_Smed_v6_7304_0_1, [RH, Score=613, Expect=0.0]} {RNA1509_17800} {RNA1310_5820, RNA1509_17800} {RNA1509_17800, RNA815_4439}
27. MligTC455_26150 294 6.13 Mlig455_009968, Mlig455_042983

Neo: -

Age: -

 HINT3 0.958 - 0.958 - - - -

Mlig455_009968 {REF} {Length: 2988} {Pfam: Scavenger mRNA decapping enzyme C-term binding [PF11969.10, score=74.9]; Methyltransferase domain [PF13383.8, score=33.5]; HIT domain [PF01230.25, score=26.3]} {Human: ENSG00000111911, HINT3, histidine triad nucleotide binding protein 3, [Score=99.8, Expect=1e-23]} {Mouse: ENSMUSG00000019791, Hint3, histidine triad nucleotide binding protein 3, [Score=101, Expect=1e-24]} {Dmel: FBgn0054015, CG34015, [Score=79.0, Expect=3e-17]} {Celegans: WBGene00016150, hint-3, HIstidiNe Triad nucleotide-binding protein, [Score=65.9, Expect=2e-12]} {Smed: dd_Smed_v6_11146_0_1, dd_Smed_v6_11146_0_1, [Score=112, Expect=5e-29]} {RNA1509_27348, RNA1509_45349} {RNA1310_31851.1, RNA1509_27348} {RNA1509_27348, RNA815_16272.1}

Mlig455_042983 {REF} {Length: 654} {Pfam: Domain of unknown function (DUF4081) [PF13312.8, score=35.0]; Ribosomal protein S31e [PF17067.7, score=21.9]} {RNA1509_37248} {RNA1310_104355} {RNA815_13586}
28. MligTC455_51885 916 19.09 Mlig455_031062

Neo: -

Age: -

 CCDC93 0.958 - - - 0.958 - - Mlig455_031062 {REF} {Length: 3495} {TRANSSPLICED} {Pfam: CCDC93, coiled-coil domain [PF09762.11, score=190.2]} {Human: ENSG00000125633, CCDC93, coiled-coil domain containing 93, [RH, Score=347, Expect=5e-111]} {Mouse: ENSMUSG00000026339, Ccdc93, coiled-coil domain containing 93, [RH, Score=352, Expect=6e-113]} {Dmel: FBgn0025519, fidipidine, [RH, Score=271, Expect=1e-82]} {Celegans: WBGene00015815, C16A11.2, [RH, Score=93.2, Expect=1e-19]} {Smed: dd_Smed_v6_2519_0_1, dd_Smed_v6_2519_0_1, [RH, Score=295, Expect=6e-92]} {RNA1509_15297, RNA1509_25762} {RNA1310_447.1, RNA1509_25762} {RNA1509_25762, RNA815_4590.1}
29. MligTC455_31935 299 6.24 Mlig455_046201

Neo: -

Age: -

Region-enriched R1: 6.310/0.00233

 0.956 - - 0.956 - - - Mlig455_046201 {REF} {Length: 1782} {Pfam: RICH domain [PF05062.14, score=19.2]} {RNA1509_2515} {RNA1310_26891} {RNA815_3258.1}
30. MligTC455_47804 2485 51.77 Mlig455_042589, Mlig455_042632

Neo: -

Age: -

Region-enriched R4: 1.074/0.01939

 SMKR1 0.956 - - - 0.956 - -

Mlig455_042589 {REF} {Length: 1673} {TRANSSPLICED} {Human: ENSG00000240204, SMKR1, small lysine rich protein 1, [RH, Score=53.5, Expect=1e-10]} {Dmel: FBgn0266615, CG45122, [RH, Score=41.2, Expect=6e-06]} {Smed: dd_Smed_v6_10158_0_1, dd_Smed_v6_10158_0_1, [RH, Score=43.9, Expect=4e-07]} {RNA1509_38498, RNA1509_57310} {RNA1310_41265, RNA1509_38498, RNA1509_57310} {RNA1509_38498, RNA1509_57310, RNA815_11227.2}

Mlig455_042632 {REF} {Length: 1583} {TRANSSPLICED} {Human: ENSG00000240204, SMKR1, small lysine rich protein 1, [RH, Score=54.3, Expect=5e-11]} {Dmel: FBgn0266615, CG45122, [Score=41.6, Expect=5e-06]} {Smed: dd_Smed_v6_10158_0_1, dd_Smed_v6_10158_0_1, [RH, Score=43.9, Expect=3e-07]} {RNA1509_11980, RNA1509_26819} {RNA1310_52333, RNA1509_11980, RNA1509_26819} {RNA1509_11980, RNA1509_26819, RNA815_11227.1}
31. MligTC455_19496 1036 21.58 Mlig455_033289

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.412

 0.953 - - 0.953 - - - Mlig455_033289 {REF} {Length: 1257} {TRANSSPLICED} {Celegans: WBGene00022538, ZC190.4, [Score=45.4, Expect=7e-06]} {RNA1509_11224, RNA1509_57362} {RNA1310_14930.2, RNA1509_57362} {RNA1509_57362, RNA815_10852}
32. MligTC455_36358 787 16.41 Mlig455_024262

Neo: Int S/G2/M

Age: -

 PEX6 0.952 - - 0.952 - - - Mlig455_024262 {REF} {Length: 2032} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=176.5]; AAA ATPase domain [PF13191.8, score=40.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=38.8]; AAA domain [PF13401.8, score=34.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=29.7]; TIP49 P-loop domain [PF06068.15, score=25.7]; AAA+ lid domain [PF17862.3, score=24.0]; AAA domain [PF13671.8, score=23.5]; RNA helicase [PF00910.24, score=23.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=22.8]; Rad17 P-loop domain [PF03215.17, score=21.4]; AAA domain (Cdc48 subfamily) [PF07724.16, score=19.5]; AAA domain [PF13238.8, score=19.3]; IstB-like ATP binding protein [PF01695.19, score=18.3]; Magnesium chelatase, subunit ChlI [PF01078.23, score=18.0]} {Human: ENSG00000124587, PEX6, peroxisomal biogenesis factor 6, [Score=278, Expect=8e-82]} {Mouse: ENSMUSG00000002763, Pex6, peroxisomal biogenesis factor 6, [Score=273, Expect=4e-80]} {Dmel: FBgn0033564, Pex6, Peroxin 6, [Score=256, Expect=2e-74]} {Celegans: WBGene00004195, prx-6, PEX6; PeRoXisome assembly factor; Pex6p homolog, [Score=233, Expect=2e-67]} {Smed: dd_Smed_v6_6906_0_1, dd_Smed_v6_6906_0_1, [RH, Score=203, Expect=1e-56]} {RNA1509_16683} {RNA1310_5166.1} {RNA815_11050}
33. MligTC455_42485 159 3.31 Mlig455_046457

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_046457 {REF} {Length: 846} {RNA1310_40237.1} {RNA815_18246}
34. MligTC455_25116 1712 35.67 Mlig455_033908, Mlig455_033931

Neo: -

Age: -

 ZAN 0.951 - - - 0.951 - -

Mlig455_033908 {REF} {Length: 5361} {TRANSSPLICED} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=55.5, Expect=6e-07]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [Score=56.2, Expect=1e-07]} {RNA1509_12184} {RNA1310_13215.1} {RNA815_10510}

Mlig455_033931 {REF} {Length: 5465} {TRANSSPLICED} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=56.6, Expect=3e-07]} {Celegans: WBGene00006436, ttn-1, Titin homolog, [Score=68.6, Expect=3e-11]} {RNA1509_12184} {RNA1310_13215.1} {RNA815_10510}
35. MligTC455_26386 624 13 Mlig455_020042

Neo: -

Age: logFC(26M/2M)=0.231

Region-enriched R5: 1.382/0.00337

 0.951 - - - 0.951 - - Mlig455_020042 {REF} {Length: 4207} {TRANSSPLICED} {Smed: dd_Smed_v6_3465_0_1, dd_Smed_v6_3465_0_1, [RH, Score=112, Expect=6e-26]} {RNA1509_13462, RNA1509_58720} {RNA1310_9257, RNA1509_13462, RNA1509_58720} {RNA1509_13462, RNA1509_58720, RNA815_5213}
36. MligTC455_04232 1872 38.99 Mlig455_040443, Mlig455_040471

Neo: -

Age: -

 PPM1H 0.95 - - - 0.950 - -

Mlig455_040443 {REF} {Length: 2816} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=108.6]} {Human: ENSG00000111110, PPM1H, protein phosphatase, Mg2+/Mn2+ dependent 1H, [Score=280, Expect=7e-88]} {Mouse: ENSMUSG00000034613, Ppm1h, protein phosphatase 1H (PP2C domain containing), [Score=277, Expect=8e-87]} {Dmel: FBgn0031194, CG17598, [Score=263, Expect=3e-80]} {Celegans: WBGene00016580, C42C1.2, [Score=266, Expect=2e-82]} {Smed: dd_Smed_v6_908_0_1, dd_Smed_v6_908_0_1, [Score=66.6, Expect=1e-11]} {RNA1509_40759, RNA1509_50423} {RNA1310_12047, RNA1509_50423} {RNA1509_50423, RNA815_2191.1}

Mlig455_040471 {REF} {Length: 2818} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=109.2]} {Human: ENSG00000111110, PPM1H, protein phosphatase, Mg2+/Mn2+ dependent 1H, [Score=284, Expect=2e-89]} {Mouse: ENSMUSG00000034613, Ppm1h, protein phosphatase 1H (PP2C domain containing), [Score=281, Expect=3e-88]} {Dmel: FBgn0031194, CG17598, [Score=268, Expect=6e-82]} {Celegans: WBGene00016580, C42C1.2, [Score=269, Expect=1e-83]} {Smed: dd_Smed_v6_908_0_1, dd_Smed_v6_908_0_1, [Score=66.6, Expect=1e-11]} {RNA1509_32207, RNA1509_40759, RNA1509_9865} {RNA1310_12047, RNA1509_32207, RNA1509_40759, RNA1509_9865} {RNA1509_32207, RNA1509_40759, RNA1509_9865, RNA815_2191.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA