M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_22137

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22137 2395 49.89 Mlig455_024340

Neo: -

Age: -

 Mlig455_024340 {REF} {Length: 1781} {RNA1509_10674, RNA1509_58325} {RNA1310_29555.1, RNA1509_58325} {RNA1509_58325, RNA815_13134}

Cumulative graph for MligTC455_22137

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.77 5.8 0.00184 0.13791
RegionR2 0.776 5.8 0.08848 0.36524
RegionR3 0.718 5.8 0.06030 0.43219
RegionR4 -0.106 5.8 0.81805 1.00000
RegionR5 -0.326 5.8 0.40257 0.76026
RegionR6 0.497 5.8 0.19368 0.76106
RegionR7 0.474 5.8 0.23373 0.85803
RegionR8 0.738 5.8 0.09049 0.56863

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.638 5.8 0.01122 0.46273
RegenerationR2 -0.532 5.8 0.25369 0.69998
RegenerationR3 -0.83 5.8 0.08733 0.47985
RegenerationR4 -0.898 5.8 0.07903 0.44570
RegenerationR5 -0.403 5.8 0.40083 0.79987
RegenerationR6 -0.684 5.8 0.15832 0.48618
RegenerationBL -1.179 5.8 0.01556 0.13153
RegenerationTP -0.556 5.8 0.25398 0.70181


Genes with expression patterns similar to MligTC455_22137

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22137 2395 49.89 Mlig455_024340

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_024340 {REF} {Length: 1781} {RNA1509_10674, RNA1509_58325} {RNA1310_29555.1, RNA1509_58325} {RNA1509_58325, RNA815_13134}
2. MligTC455_04009 478 9.96 Mlig455_001797

Neo: -

Age: -

 DGKQ 2.512 - - - 0.821 0.966 0.725 Mlig455_001797 {REF} {Length: 5042} {TRANSSPLICED} {Pfam: Diacylglycerol kinase accessory domain [PF00609.21, score=185.2]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=99.3]; Diacylglycerol kinase catalytic domain [PF00781.26, score=79.4]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=38.7]} {Human: ENSG00000145214, DGKQ, diacylglycerol kinase theta, [RH, Score=650, Expect=0.0]} {Mouse: ENSMUSG00000004815, Dgkq, diacylglycerol kinase, theta, [RH, Score=667, Expect=0.0]} {Dmel: FBgn0051140, CG31140, [Score=978, Expect=0.0]} {Celegans: WBGene00000958, dgk-1, Diacylglycerol kinase, [Score=809, Expect=0.0]} {Smed: dd_Smed_v6_7792_0_5, dd_Smed_v6_7792_0_5, [RH, Score=1024, Expect=0.0]} {RNA1509_8388} {RNA1310_12564} {RNA815_1076.1}
3. MligTC455_36543 145 3.03 Mlig455_067860

Neo: -

Age: Down-Up-Up

 MFSD8 2.472 - - 0.763 - 0.960 0.749 Mlig455_067860 {REF} {Length: 3751} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.6]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=61.2, Expect=2e-09]} {Mouse: ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=58.2, Expect=2e-09]; ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=58.2, Expect=2e-09]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=369, Expect=7e-123]} {RNA1509_54938} {RNA1310_19930} {RNA815_20915}
4. MligTC455_24720 802 16.71 Mlig455_001228, Mlig455_034587

Neo: -

Age: -

 1.792 - - - - 0.954 0.838

Mlig455_001228 {REF} {Length: 4255} {Pfam: Innexin [PF00876.20, score=420.4]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=107, Expect=3e-25]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=320, Expect=4e-105]} {Smed: dd_Smed_v6_6114_0_1, dd_Smed_v6_6114_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_7709} {RNA1310_4086.1} {RNA815_4210.1}

Mlig455_034587 {REF} {Length: 4078} {Pfam: Innexin [PF00876.20, score=420.4]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=107, Expect=4e-25]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=320, Expect=4e-105]} {Smed: dd_Smed_v6_6114_0_1, dd_Smed_v6_6114_0_1, [RH, Score=570, Expect=0.0]} {RNA1509_7709} {RNA1310_4086.1} {RNA815_4210.1}
5. MligTC455_48861 618 12.86 Mlig455_055354

Neo: -

Age: logFC(26M/2M)=-0.492

 1.772 - - 0.821 - 0.951 - Mlig455_055354 {REF} {Length: 2604} {Pfam: Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=40.7]; Autophagy protein 16 (ATG16) [PF08614.13, score=20.0]; SH3 domain [PF00018.30, score=19.0]} {Smed: dd_Smed_v6_834_0_1, dd_Smed_v6_834_0_1, [Score=57.0, Expect=2e-08]} {RNA1509_54914} {RNA1310_16283} {RNA815_6206.1}
6. MligTC455_42252 249 5.19 Mlig455_038933

Neo: Int S/G2/M

Age: Down-Up-Down

 USP48 1.764 - - - - 0.973 0.791 Mlig455_038933 {REF} {Length: 3472} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=104.0]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=43.5]} {Human: ENSG00000090686, USP48, ubiquitin specific peptidase 48, [Score=85.1, Expect=1e-16]; ENSG00000136014, USP44, ubiquitin specific peptidase 44, [Score=83.2, Expect=1e-15]; ENSG00000106346, USP42, ubiquitin specific peptidase 42, [Score=82.0, Expect=4e-15]} {Mouse: ENSMUSG00000043411, Usp48, ubiquitin specific peptidase 48, [Score=91.7, Expect=1e-18]} {Dmel: FBgn0039214, puf, puffyeye, [Score=82.4, Expect=2e-15]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=80.1, Expect=4e-15]} {Smed: dd_Smed_v6_7150_0_4, dd_Smed_v6_7150_0_4, [Score=77.8, Expect=1e-14]} {RNA1509_17169, RNA1509_48658} {RNA1310_7010, RNA1509_17169, RNA1509_48658} {RNA1509_17169, RNA1509_48658, RNA815_4869}
7. MligTC455_39218 2348 48.93 Mlig455_041424, Mlig455_061374, Mlig455_061402

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.484

Region-enriched R8: 1.418/0.00334

 1.674 - - 0.724 - - 0.950

Mlig455_041424 {REF} {Length: 2036} {RNA1509_20247} {RNA1310_14766.1} {RNA815_5556.1}

Mlig455_061374 {REF} {Length: 2145} {RNA1509_20247} {RNA1310_14766.1} {RNA815_5556.1}

Mlig455_061402 {REF} {Length: 2213} {RNA1509_42364, RNA1509_44881} {RNA1310_14766.1, RNA1509_42364} {RNA1509_42364, RNA815_5556.1}
8. MligTC455_39625 625 13.03 Mlig455_006331

Neo: -

Age: Down-Up-Down

 TRIM65 0.973 - - - - - 0.973 Mlig455_006331 {REF} {Length: 2946} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=39.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=36.7]; RING-type zinc-finger [PF13445.8, score=35.7]; Ring finger domain [PF13639.8, score=35.7]; Prokaryotic RING finger family 4 [PF14447.8, score=26.2]; zinc-RING finger domain [PF14634.8, score=25.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=24.9]; U-box domain [PF04564.17, score=21.0]; zinc RING finger of MSL2 [PF16685.7, score=20.5]; RING-H2 zinc finger domain [PF12678.9, score=19.7]} {Human: ENSG00000141569, TRIM65, tripartite motif containing 65, [Score=66.6, Expect=6e-11]; ENSG00000248710, AC079594.2, novel tripartite motif-containing 59 (TRIM59) and intraflagellar transport 80 homolog (Chlamydomonas) (IFT80) protein, [Score=65.5, Expect=2e-10]; ENSG00000213186, TRIM59, tripartite motif containing 59, [Score=65.1, Expect=1e-11]} {Mouse: ENSMUSG00000035235, Trim13, tripartite motif-containing 13, [RH, Score=60.8, Expect=2e-09]; ENSMUSG00000057143, Trim12c, tripartite motif-containing 12C, [RH, Score=60.5, Expect=4e-09]; ENSMUSG00000060441, Trim5, tripartite motif-containing 5, [RH, Score=60.5, Expect=3e-09]; ENSMUSG00000054517, Trim65, tripartite motif-containing 65, [RH, Score=59.7, Expect=7e-09]; ENSMUSG00000000275, Trim25, tripartite motif-containing 25, [RH, Score=59.3, Expect=1e-08]} {Dmel: FBgn0265356, tn, thin, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_14782_0_3, dd_Smed_v6_14782_0_3, [Score=51.6, Expect=5e-07]} {RNA1509_47893} {RNA1310_12453.1} {RNA815_4491}
9. MligTC455_46754 113 2.36 Mlig455_031199

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_031199 {REF} {Length: 3053} {Smed: dd_Smed_v6_18803_0_1, dd_Smed_v6_18803_0_1, [RH, Score=293, Expect=1e-92]} {RNA1509_51776, RNA1509_57274} {RNA1310_20081.2, RNA1509_57274} {RNA1509_57274, RNA815_13827}
10. MligTC455_47844 25 0.52 Mlig455_054684

Neo: -

Age: logFC(26M/2M)=-0.260

 RPGRIP1L 0.965 - - - - 0.965 - Mlig455_054684 {REF} {Length: 3774} {TRANSSPLICED} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=115, Expect=5e-26]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=111, Expect=5e-25]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=143, Expect=1e-35]} {RNA1509_12953} {RNA1310_4375.1} {RNA815_1280}
11. MligTC455_48345 152 3.17 Mlig455_016743

Neo: -

Age: logFC(26M/2M)=-0.564

 0.965 - - - - 0.965 - Mlig455_016743 {REF} {Length: 2816} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=22.2]} {RNA1509_12740} {RNA1310_9917} {RNA815_21671}
12. MligTC455_50129 935 19.48 Mlig455_066199, Mlig455_068834

Neo: -

Age: -

 BRAF 0.965 - - - - - 0.965

Mlig455_066199 {REF} {Length: 4134} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=201.8]; Protein kinase domain [PF00069.27, score=178.9]; Raf-like Ras-binding domain [PF02196.17, score=62.7]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=28.8]; Kinase-like [PF14531.8, score=24.2]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [RH, Score=488, Expect=1e-159]} {Mouse: ENSMUSG00000002413, Braf, Braf transforming gene, [RH, Score=486, Expect=3e-159]} {Dmel: FBgn0003079, Raf, Raf oncogene, [RH, Score=374, Expect=1e-116]} {Celegans: WBGene00003030, lin-45, Raf homolog serine/threonine-protein kinase, [RH, Score=342, Expect=6e-104]} {Smed: dd_Smed_v6_10148_0_1, dd_Smed_v6_10148_0_1, [RH, Score=458, Expect=5e-149]} {RNA1509_5530} {RNA1310_8028.1, RNA1509_5530} {RNA1509_5530, RNA815_4195.1}

Mlig455_068834 {REF} {Length: 4180} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=201.0]; Protein kinase domain [PF00069.27, score=178.1]; Raf-like Ras-binding domain [PF02196.17, score=62.7]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=28.8]; Kinase-like [PF14531.8, score=23.0]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [RH, Score=489, Expect=4e-160]} {Mouse: ENSMUSG00000002413, Braf, Braf transforming gene, [RH, Score=488, Expect=7e-160]} {Dmel: FBgn0003079, Raf, Raf oncogene, [RH, Score=373, Expect=2e-116]} {Celegans: WBGene00003030, lin-45, Raf homolog serine/threonine-protein kinase, [RH, Score=342, Expect=5e-104]} {Smed: dd_Smed_v6_10148_0_1, dd_Smed_v6_10148_0_1, [RH, Score=459, Expect=1e-149]} {RNA1509_5530} {RNA1310_9384} {RNA815_4195.1}
13. MligTC455_21207 31 0.64 Mlig455_006965

Neo: -

Age: Up-Down-Down

 0.961 - - - - 0.961 - Mlig455_006965 {REF} {Length: 2337} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=175.8]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_29341_0_1, dd_Smed_v6_29341_0_1, [Score=106, Expect=4e-24]} {RNA1509_40591} {RNA1310_76300} {RNA815_33175.1}
14. MligTC455_56674 10 0.21 Mlig455_036972

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_036972 {REF} {Length: 784} {NoTransDecoderORF}
15. MligTC455_44666 192 4.01 Mlig455_008874, Mlig455_008975

Neo: -

Age: -

 TECPR2 0.959 - - - - 0.959 -

Mlig455_008874 {REF} {Length: 6602} {TRANSSPLICED} {Human: ENSG00000196663, TECPR2, tectonin beta-propeller repeat containing 2, [Score=75.1, Expect=1e-12]} {Mouse: ENSMUSG00000021275, Tecpr2, tectonin beta-propeller repeat containing 2, [Score=75.1, Expect=8e-13]} {Dmel: FBgn0033177, CG11141, [RH, Score=58.2, Expect=7e-08]} {Smed: dd_Smed_v6_1875_0_1, dd_Smed_v6_1875_0_1, [Score=62.4, Expect=6e-10]} {RNA1509_54506} {RNA1310_26253} {RNA815_56496}

Mlig455_008975 {REF} {Length: 6916} {Human: ENSG00000196663, TECPR2, tectonin beta-propeller repeat containing 2, [Score=70.9, Expect=2e-11]} {Mouse: ENSMUSG00000021275, Tecpr2, tectonin beta-propeller repeat containing 2, [Score=73.2, Expect=3e-12]} {Dmel: FBgn0033177, CG11141, [RH, Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_1875_0_1, dd_Smed_v6_1875_0_1, [RH, Score=71.2, Expect=8e-13]} {RNA1509_54506} {RNA1310_26253} {RNA815_56496}
16. MligTC455_53622 21 0.44 Mlig455_020698

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_020698 {REF} {Length: 581} {NoTransDecoderORF} {RNA1310_138346} {RNA815_56547}
17. MligTC455_26251 74 1.54 Mlig455_042876

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_042876 {REF} {Length: 1584} {tRNA: Val(CAC),pseudo, score=36.5} {RNA1509_27801} {RNA1310_2677.1} {RNA815_43902}
18. MligTC455_41263 96 1.99 Mlig455_009993

Neo: -

Age: -

 BCR 0.958 - - - - 0.958 - Mlig455_009993 {REF} {Length: 3188} {Pfam: RhoGAP domain [PF00620.29, score=87.3]} {Human: ENSG00000186716, BCR, BCR, RhoGEF and GTPase activating protein, [Score=84.7, Expect=3e-19]; ENSG00000276016, ABR, ABR, RhoGEF and GTPase activating protein, [Score=82.8, Expect=1e-18]; ENSG00000278741, ABR, ABR, RhoGEF and GTPase activating protein, [Score=82.8, Expect=1e-18]; ENSG00000159842, ABR, ABR, RhoGEF and GTPase activating protein, [Score=82.8, Expect=1e-18]} {Mouse: ENSMUSG00000009681, Bcr, breakpoint cluster region, [Score=85.5, Expect=1e-19]; ENSMUSG00000017631, Abr, active BCR-related gene, [Score=82.8, Expect=9e-19]} {Dmel: FBgn0025836, RhoGAP1A, Rho GTPase activating protein at 1A, [Score=80.9, Expect=3e-18]} {Celegans: WBGene00009800, rrc-1, GTPase-activating protein rrc-1, [Score=73.6, Expect=9e-16]} {Smed: dd_Smed_v6_11121_0_1, dd_Smed_v6_11121_0_1, [Score=74.3, Expect=4e-16]} {RNA1509_36484} {RNA1310_27150.1} {RNA815_24756.1}
19. MligTC455_13403 157 3.27 Mlig455_058321

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.878/0.03174

 LARP1 0.957 - - - 0.957 - - Mlig455_058321 {REF} {Length: 2328} {Human: ENSG00000155506, LARP1, La ribonucleoprotein domain family member 1, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=178, Expect=5e-52]; ENSMUSG00000025762, Larp1b, La ribonucleoprotein domain family, member 1B, [Score=171, Expect=9e-54]} {Dmel: FBgn0261618, larp, La related protein, [Score=172, Expect=4e-50]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=136, Expect=2e-37]} {Smed: dd_Smed_v6_2667_0_1, dd_Smed_v6_2667_0_1, [Score=170, Expect=2e-49]} {RNA1509_29509} {RNA1310_3597.2, RNA1509_29509} {RNA1509_29509, RNA815_2607}
20. MligTC455_02117 19 0.4 Mlig455_065174

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_065174 {REF} {Length: 1623}
21. MligTC455_25721 60 1.26 Mlig455_004763

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.345

 SLC43A3 0.955 - - - - 0.955 - Mlig455_004763 {REF} {Length: 2625} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=18.6]} {Human: ENSG00000134802, SLC43A3, solute carrier family 43 member 3, [Score=71.6, Expect=1e-12]} {Smed: dd_Smed_v6_28076_0_1, dd_Smed_v6_28076_0_1, [Score=53.1, Expect=2e-07]} {RNA1509_12947} {RNA1310_7286.2} {RNA815_11365}
22. MligTC455_38081 291 6.07 Mlig455_033767

Neo: -

Age: -

Region-enriched R5: 2.060/0.00325

 NOSTRIN 0.955 - - - - 0.955 - Mlig455_033767 {REF} {Length: 3179} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=60.2]; SH3 domain [PF00018.30, score=58.8]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=43.2]; Variant SH3 domain [PF07653.19, score=40.4]} {Human: ENSG00000163072, NOSTRIN, nitric oxide synthase trafficking, [RH, Score=153, Expect=3e-39]} {Mouse: ENSMUSG00000034738, Nostrin, nitric oxide synthase trafficker, [RH, Score=133, Expect=2e-32]} {Dmel: FBgn0259734, Nost, Nostrin, [RH, Score=239, Expect=2e-66]} {Celegans: WBGene00012891, sorb-1, SORBin homolog, [Score=65.5, Expect=7e-11]} {Smed: dd_Smed_v6_4715_0_3, dd_Smed_v6_4715_0_3, [RH, Score=244, Expect=5e-72]} {RNA1509_18969} {RNA1310_11383.1, RNA1509_18969} {RNA1509_18969, RNA815_7401}
23. MligTC455_54119 185 3.85 Mlig455_023736

Neo: -

Age: -

 KLHL3 0.955 - - - - 0.955 - Mlig455_023736 {REF} {Length: 3085} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=103.7]; BTB/POZ domain [PF00651.33, score=92.9]; BTB And C-terminal Kelch [PF07707.17, score=89.5]; Kelch motif [PF13964.8, score=87.4]; Galactose oxidase, central domain [PF13415.8, score=64.0]; Galactose oxidase, central domain [PF13418.8, score=59.2]; Kelch motif [PF07646.17, score=38.7]; Kelch motif [PF13854.8, score=30.7]} {Human: ENSG00000146021, KLHL3, kelch like family member 3, [Score=234, Expect=2e-67]; ENSG00000076321, KLHL20, kelch like family member 20, [Score=229, Expect=5e-65]; ENSG00000179454, KLHL28, kelch like family member 28, [Score=225, Expect=6e-64]; ENSG00000109466, KLHL2, kelch like family member 2, [Score=225, Expect=8e-64]} {Mouse: ENSMUSG00000014164, Klhl3, kelch-like 3, [Score=239, Expect=3e-69]; ENSMUSG00000026705, Klhl20, kelch-like 20, [Score=228, Expect=6e-65]} {Dmel: FBgn0001301, kel, kelch, [Score=224, Expect=5e-63]} {Celegans: WBGene00020030, R12E2.1, [Score=194, Expect=5e-53]} {Smed: dd_Smed_v6_6164_0_1, dd_Smed_v6_6164_0_1, [Score=212, Expect=3e-59]} {RNA1509_18609, RNA1509_56192} {RNA1310_6930.2, RNA1509_18609, RNA1509_56192} {RNA1509_18609, RNA1509_56192, RNA815_9091}
24. MligTC455_26252 224 4.66 Mlig455_009662, Mlig455_023083, Mlig455_070192

Neo: -

Age: -

 0.954 - - - - 0.954 -

Mlig455_009662 {REF} {Length: 2717} {tRNA: Val(CAC),pseudo, score=36.5} {RNA1509_10444} {RNA1310_2677.1} {RNA815_2733.1}

Mlig455_023083 {REF} {Length: 538} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=36.5} {RNA1509_21228} {RNA1310_20140} {RNA815_16852}

Mlig455_070192 {REF} {Length: 1085} {NoTransDecoderORF} {tRNA: Arg(ACG),pseudo, score=25.2} {RNA1509_21228} {RNA1310_20140} {RNA815_16852}
25. MligTC455_52318 64 1.34 Mlig455_062030

Neo: -

Age: -

Region-enriched R4: 4.894/0.00894

 0.954 - - - - 0.954 - Mlig455_062030 {REF} {Length: 1090} {RNA1509_6241} {RNA1310_26979} {RNA815_23904}
26. MligTC455_53112 231 4.8 Mlig455_050432

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_050432 {REF} {Length: 171} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45803, RNA1509_52849} {RNA1310_72795.1, RNA1509_45803, RNA1509_52849} {RNA1509_45803, RNA1509_52849, RNA815_39804}
27. MligTC455_26890 709 14.77 Mlig455_018271

Neo: -

Age: logFC(26M/2M)=0.639

 0.953 - - - 0.953 - - Mlig455_018271 {REF} {Length: 1102} {RNA1509_731} {RNA1310_41414} {RNA815_9260.1}
28. MligTC455_03485 626 13.03 Mlig455_036411, Mlig455_054583

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.414

 DESI1 0.952 - - - - - 0.952

Mlig455_036411 {REF} {Length: 302} {NoTransDecoderORF} {RNA1509_33079} {RNA1310_40757} {RNA815_26412}

Mlig455_054583 {REF} {Length: 2410} {Pfam: PPPDE putative peptidase domain [PF05903.16, score=137.0]} {Human: ENSG00000100418, DESI1, desumoylating isopeptidase 1, [RH, Score=182, Expect=2e-55]} {Mouse: ENSMUSG00000022472, Desi1, desumoylating isopeptidase 1, [RH, Score=183, Expect=6e-56]} {Celegans: WBGene00018090, F36D4.5, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_30764_0_1, dd_Smed_v6_30764_0_1, [RH, Score=123, Expect=2e-33]} {RNA1509_16841, RNA1509_23047, RNA1509_50764} {RNA1310_17059, RNA1509_23047, RNA1509_50764} {RNA1509_23047, RNA1509_50764, RNA815_26559.1}
29. MligTC455_47868 5452 113.57 Mlig455_031216

Neo: -

Age: logFC(26M/2M)=-0.277

 TEKT1 0.952 - - - 0.952 - - Mlig455_031216 {REF} {Length: 1751} {TRANSSPLICED} {Pfam: Tektin family [PF03148.16, score=439.2]} {Human: ENSG00000167858, TEKT1, tektin 1, [RH, Score=379, Expect=4e-129]} {Mouse: ENSMUSG00000020799, Tekt1, tektin 1, [RH, Score=373, Expect=9e-127]} {Dmel: FBgn0052820, CG32820, [Score=217, Expect=4e-65]} {Smed: dd_Smed_v6_3287_0_2, dd_Smed_v6_3287_0_2, [RH, Score=448, Expect=1e-156]} {RNA1509_1682, RNA1509_19187, RNA1509_25112, RNA1509_29996, RNA1509_52215} {RNA1310_15062.1, RNA1509_1682, RNA1509_19187, RNA1509_25112, RNA1509_29996, RNA1509_52215} {RNA1509_1682, RNA1509_19187, RNA1509_25112, RNA1509_29996, RNA1509_52215, RNA815_6688}
30. MligTC455_51977 119 2.48 Mlig455_026762, Mlig455_051779

Neo: -

Age: Down-Up-Up

 HOXA1 0.951 - - - - 0.951 -

Mlig455_026762 {REF} {Length: 2041} {Pfam: Homeodomain [PF00046.31, score=79.1]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=116, Expect=4e-30]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=114, Expect=8e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=111, Expect=2e-28]} {Mouse: ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=116, Expect=2e-30]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=113, Expect=4e-29]} {Dmel: FBgn0002522, lab, labial, [RH, Score=118, Expect=4e-30]} {Celegans: WBGene00000437, ceh-13, Homeobox protein ceh-13, [RH, Score=85.1, Expect=6e-20]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=121, Expect=3e-34]} {RNA1310_35369} {RNA815_17610}

Mlig455_051779 {REF} {Length: 2283} {Pfam: Homeodomain [PF00046.31, score=80.2]} {Human: ENSG00000105991, HOXA1, homeobox A1, [RH, Score=118, Expect=7e-31]; ENSG00000120094, HOXB1, homeobox B1, [RH, Score=117, Expect=1e-30]; ENSG00000128645, HOXD1, homeobox D1, [RH, Score=114, Expect=3e-29]} {Mouse: ENSMUSG00000029844, Hoxa1, homeobox A1, [RH, Score=118, Expect=4e-31]; ENSMUSG00000018973, Hoxb1, homeobox B1, [RH, Score=116, Expect=1e-30]; ENSMUSG00000042448, Hoxd1, homeobox D1, [RH, Score=115, Expect=5e-30]} {Dmel: FBgn0002522, lab, labial, [RH, Score=120, Expect=8e-31]} {Celegans: WBGene00000437, ceh-13, Homeobox protein ceh-13, [RH, Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_62255_0_1, dd_Smed_v6_62255_0_1, [RH, Score=122, Expect=6e-35]} {RNA1509_53134} {RNA1310_35369} {RNA815_17610}
31. MligTC455_28724 128 2.66 Mlig455_017717

Neo: -

Age: Up-Down-Down

 ANK1 0.95 - - - 0.950 - - Mlig455_017717 {REF} {Length: 9852} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=513.3]; Ankyrin repeats (many copies) [PF13637.8, score=459.4]; Ankyrin repeats (many copies) [PF13857.8, score=371.3]; Ankyrin repeat [PF13606.8, score=296.0]; Ankyrin repeat [PF00023.32, score=166.1]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=149, Expect=4e-35]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=143, Expect=2e-33]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=145, Expect=3e-34]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=142, Expect=3e-33]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=142, Expect=3e-33]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=147, Expect=9e-35]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=129, Expect=1e-29]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=171, Expect=7e-43]} {RNA1509_11517} {RNA1310_203} {RNA815_6981}
32. MligTC455_42690 55 1.14 Mlig455_062132

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_062132 {REF} {Length: 4673} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=41.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=23.1]} {Smed: dd_Smed_v6_62893_0_1, dd_Smed_v6_62893_0_1, [RH, Score=47.8, Expect=3e-07]} {RNA1509_31503} {RNA1310_63439}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA