Data search


search
Exact
Search

Results for MligTC455_22335

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22335 168 3.51 Mlig455_002669, Mlig455_014723

Neo: -

Age: -

Mlig455_002669 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_58323} {RNA1310_33624.1, RNA1509_58323} {RNA1509_58323, RNA815_17640.1}

Mlig455_014723 {REF} {Length: 261} {RNA1509_23617} {RNA1310_25392} {RNA815_17640.1}

Cumulative graph for MligTC455_22335

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.944 2.397 0.56207 1.00000
RegionR2 -0.353 2.397 0.64041 0.97814
RegionR3 0.189 2.397 0.74954 1.00000
RegionR4 1.422 2.397 0.03844 0.16127
RegionR5 -1.14 2.397 0.10668 0.31905
RegionR6 -0.771 2.397 0.32015 0.90891
RegionR7 -0.664 2.397 0.53950 1.00000
RegionR8 0.374 2.397 0.72813 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.568 2.397 0.37751 1.00000
RegenerationR2 -0.479 2.397 0.44545 0.84352
RegenerationR3 0.491 2.397 0.46784 0.84246
RegenerationR4 0.472 2.397 0.47350 0.85536
RegenerationR5 1.801 2.397 0.01129 0.18749
RegenerationR6 1.305 2.397 0.10333 0.39837
RegenerationBL -0.704 2.397 0.53531 0.89485
RegenerationTP 1.253 2.397 0.16591 0.59655


Genes with expression patterns similar to MligTC455_22335

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22335 168 3.51 Mlig455_002669, Mlig455_014723

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_002669 {REF} {Length: 855} {NoTransDecoderORF} {RNA1509_58323} {RNA1310_33624.1, RNA1509_58323} {RNA1509_58323, RNA815_17640.1}

Mlig455_014723 {REF} {Length: 261} {RNA1509_23617} {RNA1310_25392} {RNA815_17640.1}
2. MligTC455_19440 231 4.81 Mlig455_060962

Neo: Int S/G2/M

Age: -

HASPIN 0.96 - - - - 0.960 - Mlig455_060962 {REF} {Length: 3260} {TRANSSPLICED} {Pfam: Haspin like kinase domain [PF12330.10, score=192.8]; Protein kinase domain [PF00069.27, score=18.5]} {Human: ENSG00000177602, HASPIN, histone H3 associated protein kinase, [RH, Score=234, Expect=4e-66]} {Mouse: ENSMUSG00000050107, Haspin, histone H3 associated protein kinase, [RH, Score=244, Expect=4e-70]} {Dmel: FBgn0046706, Haspin, [Score=218, Expect=3e-62]} {Celegans: WBGene00007258, hasp-1, HASPin kinase related, [RH, Score=207, Expect=3e-56]} {Smed: dd_Smed_v6_12380_0_1, dd_Smed_v6_12380_0_1, [RH, Score=339, Expect=3e-107]} {RNA1509_10543, RNA1509_34207} {RNA1310_6931.1, RNA1509_10543, RNA1509_34207} {RNA1509_10543, RNA1509_34207, RNA815_2291}
3. MligTC455_29891 49 1.02 Mlig455_006434

Neo: -

Age: Up-Down-Up

CRB2 0.955 - - - - 0.955 - Mlig455_006434 {REF} {Length: 3643} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=109.5]; Human growth factor-like EGF [PF12661.9, score=64.4]; Laminin G domain [PF02210.26, score=31.8]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=261, Expect=8e-72]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=256, Expect=6e-70]} {Dmel: FBgn0259685, crb, crumbs, [Score=235, Expect=5e-63]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=139, Expect=4e-33]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=136, Expect=3e-32]} {RNA1509_29406} {RNA1310_26279.1} {RNA815_3525.1}
4. MligTC455_37739 214 4.46 Mlig455_042190, Mlig455_059011

Neo: -

Age: -

0.954 - - - - 0.954 -

Mlig455_042190 {REF} {Length: 3209} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425}

Mlig455_059011 {REF} {Length: 3198} {NoTransDecoderORF} {RNA1509_18414} {RNA1310_53850} {RNA815_19425}
5. MligTC455_13786 48 1.01 Mlig455_033693

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_033693 {REF} {Length: 1503} {NoTransDecoderORF} {RNA1509_45700} {RNA1310_39783} {RNA815_39530}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA