M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_35840

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_35840 39 0.81 Mlig455_029909, Mlig455_063972

Neo: -

Age: -

Mlig455_029909 {REF} {Length: 2792} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_56135} {RNA1310_24780.1} {RNA815_41468}

Mlig455_063972 {REF} {Length: 1073} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.4]}

Cumulative graph for MligTC455_35840

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.168 1.083 0.99996 1.00000
RegionR2 2.827 1.083 0.05985 0.29484
RegionR3 -0.047 1.083 0.99989 1.00000
RegionR4 -0.278 1.083 0.99985 1.00000
RegionR5 0.013 1.083 0.99986 1.00000
RegionR6 -0.317 1.083 0.99989 1.00000
RegionR7 -0.498 1.083 0.99993 1.00000
RegionR8 -0.532 1.083 0.99996 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.335 1.083 1.00000 1.00000
RegenerationR2 1.426 1.083 0.13942 0.56865
RegenerationR3 3.141 1.083 0.07667 0.45890
RegenerationR4 2.109 1.083 0.11741 0.52259
RegenerationR5 3.425 1.083 0.01690 0.22611
RegenerationR6 4.474 1.083 0.01341 0.14266
RegenerationBL 3.778 1.083 0.06883 0.30516
RegenerationTP 2.686 1.083 0.35805 0.79878


Genes with expression patterns similar to MligTC455_35840

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_35840 39 0.81 Mlig455_029909, Mlig455_063972

Neo: -

Age: -

 2 - - - - 1.000 1.000

Mlig455_029909 {REF} {Length: 2792} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_56135} {RNA1310_24780.1} {RNA815_41468}

Mlig455_063972 {REF} {Length: 1073} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.4]}
2. MligTC455_22262 125 2.61 Mlig455_021501, Mlig455_063196, Mlig455_067390

Neo: -

Age: Up-Down-Down

 OSBPL2 1.757 - - - - 0.805 0.952

Mlig455_021501 {REF} {Length: 5055} {Pfam: Oxysterol-binding protein [PF01237.20, score=361.3]} {Human: ENSG00000130703, OSBPL2, oxysterol binding protein like 2, [Score=296, Expect=2e-94]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [Score=322, Expect=1e-99]} {Dmel: FBgn0034951, CG3860, [Score=312, Expect=2e-101]} {Celegans: WBGene00008832, obr-2, Oxysterol Binding protein (OSBP) Related, [Score=184, Expect=8e-53]} {Smed: dd_Smed_v6_12759_0_1, dd_Smed_v6_12759_0_1, [Score=275, Expect=1e-86]} {RNA1310_94348} {RNA815_58347}

Mlig455_063196 {REF} {Length: 3563} {Pfam: Oxysterol-binding protein [PF01237.20, score=373.3]} {Human: ENSG00000130703, OSBPL2, oxysterol binding protein like 2, [Score=311, Expect=5e-100]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [Score=338, Expect=1e-105]} {Dmel: FBgn0034951, CG3860, [Score=330, Expect=9e-108]} {Celegans: WBGene00008832, obr-2, Oxysterol Binding protein (OSBP) Related, [Score=184, Expect=1e-52]} {Smed: dd_Smed_v6_12759_0_1, dd_Smed_v6_12759_0_1, [Score=288, Expect=3e-91]} {RNA1310_86980}

Mlig455_067390 {REF} {Length: 3507} {Pfam: Oxysterol-binding protein [PF01237.20, score=236.5]} {Human: ENSG00000130703, OSBPL2, oxysterol binding protein like 2, [Score=223, Expect=1e-67]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [Score=244, Expect=3e-75]} {Dmel: FBgn0034951, CG3860, [Score=221, Expect=2e-67]} {Celegans: WBGene00008832, obr-2, Oxysterol Binding protein (OSBP) Related, [Score=92.4, Expect=3e-20]} {Smed: dd_Smed_v6_12759_0_1, dd_Smed_v6_12759_0_1, [Score=177, Expect=1e-50]} {RNA1310_86980}
3. MligTC455_22537 139 2.89 Mlig455_016993

Neo: -

Age: -

 1.68 - - - - 0.951 0.729 Mlig455_016993 {REF} {Length: 897} {RNA1509_50526} {RNA1310_65793.1} {RNA815_39534}
4. MligTC455_30310 35 0.72 Mlig455_064894

Neo: -

Age: logFC(26M/2M)=-0.316

 MAP3K19 0.973 - - - - 0.973 - Mlig455_064894 {REF} {Length: 4973} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=251.2]; Ankyrin repeats (many copies) [PF13637.8, score=203.0]; Protein kinase domain [PF00069.27, score=179.1]; Ankyrin repeat [PF00023.32, score=143.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.9]; Ankyrin repeat [PF13606.8, score=116.2]; Ankyrin repeats (many copies) [PF13857.8, score=89.6]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=38.5]; L27_2 [PF09045.12, score=36.9]; Aft1 HRR domain [PF11787.10, score=33.7]; ABC1 atypical kinase-like domain [PF03109.18, score=28.9]; Fungal protein kinase [PF17667.3, score=23.6]; Bim protein N-terminus [PF06773.13, score=22.8]; Protein of unknown function (DUF3105) [PF11303.10, score=22.6]; Catalytic beta propeller domain of bacteriophage endosialidase [PF12217.10, score=22.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=154, Expect=6e-39]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=155, Expect=2e-39]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=142, Expect=9e-35]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [Score=135, Expect=3e-32]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=144, Expect=8e-38]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
5. MligTC455_39813 75 1.57 Mlig455_045961

Neo: -

Age: -

 SLC17A8 0.968 - - - - - 0.968 Mlig455_045961 {REF} {Length: 3015} {Pfam: Major Facilitator Superfamily [PF07690.18, score=170.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=20.5]} {Human: ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [RH, Score=540, Expect=0.0]; ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [RH, Score=540, Expect=0.0]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [RH, Score=529, Expect=0.0]} {Mouse: ENSMUSG00000019935, Slc17a8, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8, [RH, Score=543, Expect=0.0]; ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [RH, Score=541, Expect=0.0]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [RH, Score=528, Expect=0.0]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [RH, Score=492, Expect=1e-166]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [RH, Score=476, Expect=2e-161]} {Smed: dd_Smed_v6_10192_0_1, dd_Smed_v6_10192_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_53919} {RNA1310_33327} {RNA815_42042}
6. MligTC455_12292 29 0.6 Mlig455_012303

Neo: -

Age: -

Regeneration-enriched BL: 8.351
Regeneration-enriched R6: 8.195
Regeneration-enriched R4: 8.172
Regeneration-enriched R3: 7.492
Regeneration-enriched R5: 6.081
Regeneration-enriched R2: 5.339

 0.967 - - - - - 0.967 Mlig455_012303 {REF} {Length: 1067} {NoTransDecoderORF} {RNA1509_39463} {RNA1310_75442} {RNA815_5572.1}
7. MligTC455_01485 65 1.34 Mlig455_001469

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_001469 {REF} {Length: 445}
8. MligTC455_31995 208 4.32 Mlig455_006132, Mlig455_022248, Mlig455_040883, Mlig455_062978

Neo: -

Age: -

 0.966 - - - - - 0.966

Mlig455_006132 {REF} {Length: 1379} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=20.7]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=64.3, Expect=2e-13]} {RNA1509_19711} {RNA1310_4563} {RNA815_51218}

Mlig455_022248 {REF} {Length: 2566} {Pfam: Integrase core domain [PF00665.28, score=45.1]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=135, Expect=9e-39]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}

Mlig455_040883 {REF} {Length: 746} {Pfam: Integrase core domain [PF00665.28, score=47.1]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=77.8, Expect=3e-17]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}

Mlig455_062978 {REF} {Length: 2584} {Pfam: Integrase core domain [PF00665.28, score=50.9]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=137, Expect=1e-39]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}
9. MligTC455_36935 35 0.72 Mlig455_051430

Neo: -

Age: -

 PARD3 0.965 - - - - - 0.965 Mlig455_051430 {REF} {Length: 4356} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=71.9]; N-terminal of Par3 and HAL proteins [PF12053.10, score=69.3]; PDZ domain [PF17820.3, score=48.1]; PDZ domain [PF13180.8, score=34.2]} {Human: ENSG00000148498, PARD3, par-3 family cell polarity regulator, [Score=150, Expect=2e-36]} {Mouse: ENSMUSG00000025812, Pard3, par-3 family cell polarity regulator, [Score=146, Expect=3e-35]} {Dmel: FBgn0000163, baz, bazooka, [Score=153, Expect=2e-37]} {Celegans: WBGene00003918, par-3, Partitioning defective protein 3, [Score=82.0, Expect=1e-15]} {Smed: dd_Smed_v6_11296_0_2, dd_Smed_v6_11296_0_2, [Score=115, Expect=8e-26]} {RNA1509_28187} {RNA1310_21435} {RNA815_17635.1}
10. MligTC455_06989 68 1.42 Mlig455_026846

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_026846 {REF} {Length: 573} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_127391}
11. MligTC455_40688 91 1.89 Mlig455_058234

Neo: -

Age: Up-Down-Down

 0.964 - - - - - 0.964 Mlig455_058234 {REF} {Length: 2364} {RNA1310_50800} {RNA815_40527}
12. MligTC455_29389 250 5.2 Mlig455_031990, Mlig455_032042, Mlig455_050523, Mlig455_061410, Mlig455_064715

Neo: -

Age: Up-Down-Up

 ABCC1 0.962 - - - - - 0.962

Mlig455_031990 {REF} {Length: 2284} {TRANSSPLICED} {Pfam: ABC transporter transmembrane region [PF00664.25, score=103.1]; ABC transporter [PF00005.29, score=34.1]} {Human: ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=432, Expect=2e-133]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=432, Expect=2e-133]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=425, Expect=7e-131]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=424, Expect=2e-130]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=449, Expect=7e-140]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=414, Expect=2e-127]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [Score=361, Expect=4e-108]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=402, Expect=7e-123]} {RNA1509_55953} {RNA1310_32066} {RNA815_54793}

Mlig455_032042 {REF} {Length: 13535} {Pfam: ABC transporter transmembrane region [PF00664.25, score=103.1]; ABC transporter [PF00005.29, score=34.1]} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=460, Expect=7e-144]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=460, Expect=7e-144]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=449, Expect=8e-142]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=441, Expect=7e-137]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=473, Expect=8e-149]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=437, Expect=9e-136]} {Celegans: WBGene00003407, mrp-1, Multidrug resistance-associated protein, [Score=379, Expect=1e-114]} {Smed: dd_Smed_v6_6609_0_1, dd_Smed_v6_6609_0_1, [Score=421, Expect=6e-130]} {RNA1509_19711} {RNA1310_1713} {RNA815_17589}

Mlig455_050523 {REF} {Length: 8514} {Pfam: Integrase core domain [PF00665.28, score=38.9]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=138, Expect=4e-40]} {RNA1509_37153} {RNA1310_1713, RNA1509_37153} {RNA1509_37153, RNA815_17589}

Mlig455_061410 {REF} {Length: 6383} {Pfam: Integrase core domain [PF00665.28, score=47.2]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [RH, Score=139, Expect=4e-40]} {RNA1509_19711} {RNA1310_1713, RNA1509_19711} {RNA1509_19711, RNA815_17589}

Mlig455_064715 {REF} {Length: 1232} {Pfam: Integrase core domain [PF00665.28, score=45.7]} {Smed: dd_Smed_v6_9908_0_3, dd_Smed_v6_9908_0_3, [Score=98.2, Expect=9e-24]} {RNA1509_19711} {RNA1310_4563} {RNA815_20739}
13. MligTC455_30123 72 1.49 Mlig455_034831

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_034831 {REF} {Length: 2577} {TRANSSPLICED} {RNA1509_19670} {RNA1310_28603.1} {RNA815_23469.1}
14. MligTC455_23419 127 2.64 Mlig455_007618

Neo: -

Age: -

 TNKS 0.96 - - - - - 0.960 Mlig455_007618 {REF} {Length: 3164} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=50.6]; Ankyrin repeat [PF00023.32, score=44.9]; Ankyrin repeat [PF13606.8, score=40.4]; Ankyrin repeats (many copies) [PF13637.8, score=37.7]; Ankyrin repeats (many copies) [PF13857.8, score=31.5]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=69.7, Expect=1e-11]; ENSG00000285372, AC270292.3, tankyrase, [Score=69.7, Expect=1e-11]; ENSG00000101745, ANKRD12, ankyrin repeat domain 12, [Score=68.9, Expect=3e-11]; ENSG00000029534, ANK1, ankyrin 1, [Score=67.0, Expect=1e-10]; ENSG00000107854, TNKS2, tankyrase 2, [Score=66.6, Expect=1e-10]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=70.5, Expect=5e-12]; ENSMUSG00000034647, Ankrd12, ankyrin repeat domain 12, [Score=69.3, Expect=1e-11]} {Dmel: FBgn0036814, CG14073, [Score=67.0, Expect=6e-11]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=52.8, Expect=6e-07]} {Smed: dd_Smed_v6_3062_0_5, dd_Smed_v6_3062_0_5, [Score=63.9, Expect=3e-11]} {RNA1509_26649} {RNA1310_6822} {RNA815_2586}
15. MligTC455_47280 33 0.69 Mlig455_051495

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_051495 {REF} {Length: 917} {RNA1310_18616}
16. MligTC455_30313 9 0.19 Mlig455_060053

Neo: -

Age: -

 ANKRD44 0.955 - - - - 0.955 - Mlig455_060053 {REF} {Length: 2604} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.0]; Ankyrin repeats (many copies) [PF13637.8, score=113.0]; Protein kinase domain [PF00069.27, score=87.0]; Ankyrin repeat [PF00023.32, score=84.0]; Ankyrin repeat [PF13606.8, score=74.4]; Ankyrin repeats (many copies) [PF13857.8, score=67.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=64.1]; L27_2 [PF09045.12, score=23.8]; Baculovirus polyhedron envelope protein, PEP, N terminus [PF04512.14, score=21.4]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=92.0, Expect=9e-19]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=64.7, Expect=2e-10]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=76.3, Expect=6e-14]} {Smed: dd_Smed_v6_4322_0_1, dd_Smed_v6_4322_0_1, [Score=78.2, Expect=7e-15]} {RNA1509_25652} {RNA1310_24355.1} {RNA815_2803.1}
17. MligTC455_43290 126 2.63 Mlig455_024815, Mlig455_024894

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.478

 0.954 - - - - 0.954 -

Mlig455_024815 {REF} {Length: 1840} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=96.1]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582}

Mlig455_024894 {REF} {Length: 2175} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=116.4]} {Smed: dd_Smed_v6_26469_0_1, dd_Smed_v6_26469_0_1, [Score=49.7, Expect=6e-07]} {RNA1509_31697} {RNA1310_20977} {RNA815_13582}
18. MligTC455_14227 126 2.62 Mlig455_033588

Neo: -

Age: Down-Up-Up

 0.953 - - - - - 0.953 Mlig455_033588 {REF} {Length: 3300} {RNA1509_33166} {RNA1310_13794.1, RNA1509_33166} {RNA1509_33166, RNA815_5286}
19. MligTC455_42779 52 1.08 Mlig455_034985

Neo: -

Age: -

 TIA1 0.953 - - - - - 0.953 Mlig455_034985 {REF} {Length: 2883} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=137.6]; RNA binding motif [PF08777.13, score=27.7]; RNA recognition motif [PF16367.7, score=27.3]; Cytosolic domain of 10TM putative phosphate transporter [PF14703.8, score=22.0]; Nup53/35/40-type RNA recognition motif [PF05172.15, score=19.3]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=19.0]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [RH, Score=236, Expect=6e-74]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [RH, Score=225, Expect=2e-69]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [RH, Score=234, Expect=2e-73]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [RH, Score=225, Expect=2e-70]} {Dmel: FBgn0085391, trv, trivet, [RH, Score=242, Expect=4e-75]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [RH, Score=229, Expect=2e-71]} {Smed: dd_Smed_v6_10924_0_1, dd_Smed_v6_10924_0_1, [RH, Score=359, Expect=2e-122]} {RNA1509_20262} {RNA1310_6771} {RNA815_11494}
20. MligTC455_45952 49 1.02 Mlig455_010511

Neo: -

Age: Down-Down-Up

 0.953 - - - - - 0.953 Mlig455_010511 {REF} {Length: 2555} {RNA1509_42045} {RNA1310_60473} {RNA815_20864}
21. MligTC455_38577 53 1.1 Mlig455_039955, Mlig455_039969

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_039955 {REF} {Length: 1584} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576}

Mlig455_039969 {REF} {Length: 462} {NoTransDecoderORF} {RNA1310_21615.2}
22. MligTC455_51026 344 7.18 Mlig455_067853

Neo: -

Age: Down-Up-Down

 0.952 - - - - 0.952 - Mlig455_067853 {REF} {Length: 1286} {Smed: dd_Smed_v6_5153_0_1, dd_Smed_v6_5153_0_1, [Score=70.5, Expect=3e-15]} {RNA1509_26429} {RNA1310_8536} {RNA815_8992}
23. MligTC455_15540 90 1.87 Mlig455_004018

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.706

 SYT7 0.95 - - - - - 0.950 Mlig455_004018 {REF} {Length: 2288} {Pfam: C2 domain [PF00168.32, score=65.8]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=109, Expect=3e-26]; ENSG00000143858, SYT2, synaptotagmin 2, [Score=107, Expect=2e-25]; ENSG00000067715, SYT1, synaptotagmin 1, [Score=105, Expect=1e-24]} {Mouse: ENSMUSG00000026452, Syt2, synaptotagmin II, [Score=107, Expect=1e-25]; ENSMUSG00000035864, Syt1, synaptotagmin I, [Score=105, Expect=1e-24]; ENSMUSG00000027849, Syt6, synaptotagmin VI, [Score=104, Expect=1e-24]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=110, Expect=1e-26]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=117, Expect=1e-29]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=104, Expect=4e-25]} {RNA1509_38256} {RNA1310_13836} {RNA815_4752.1}
24. MligTC455_20658 197 4.11 Mlig455_038718, Mlig455_063446

Neo: -

Age: -

 0.95 - - - - - 0.950

Mlig455_038718 {REF} {Length: 1687} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.1} {RNA815_14343.1}

Mlig455_063446 {REF} {Length: 394} {NoTransDecoderORF} {RNA1509_51071} {RNA1310_2938.1} {RNA815_14343.3}
25. MligTC455_39771 140 2.91 Mlig455_016986

Neo: -

Age: -

Region-enriched R7: 2.817/0.02272

 GEM 0.95 - - - - 0.950 - Mlig455_016986 {REF} {Length: 2406} {Pfam: Ras family [PF00071.24, score=42.2]} {Human: ENSG00000164949, GEM, GTP binding protein overexpressed in skeletal muscle, [Score=70.1, Expect=2e-12]} {Mouse: ENSMUSG00000028214, Gem, GTP binding protein (gene overexpressed in skeletal muscle), [Score=70.1, Expect=9e-13]} {Dmel: FBgn0085419, Rgk2, Rad, Gem/Kir family member 2, [Score=120, Expect=2e-28]} {Celegans: WBGene00013124, Y52B11A.4, [Score=66.2, Expect=2e-11]} {Smed: dd_Smed_v6_11010_0_1, dd_Smed_v6_11010_0_1, [Score=127, Expect=8e-32]} {RNA1310_32533.2} {RNA815_17720}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA