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Results for MligTC455_22538

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22538 12 0.25 Mlig455_031920

Neo: -

Age: logFC(26M/2M)=-0.408

 PCDHA2 Mlig455_031920 {REF} {Length: 4404} {Pfam: Cadherin domain [PF00028.19, score=209.1]; Cadherin-like [PF16184.7, score=43.8]; Cadherin-like [PF08266.14, score=27.8]} {Human: ENSG00000204969, PCDHA2, protocadherin alpha 2, [Score=183, Expect=1e-46]; ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=180, Expect=9e-46]; ENSG00000204963, PCDHA7, protocadherin alpha 7, [Score=179, Expect=2e-45]; ENSG00000242419, PCDHGC4, protocadherin gamma subfamily C, 4, [Score=178, Expect=4e-45]} {Mouse: ENSMUSG00000104148, Pcdha2, protocadherin alpha 2, [Score=185, Expect=2e-47]; ENSMUSG00000007440, Pcdha11, protocadherin alpha 11, [Score=182, Expect=1e-46]; ENSMUSG00000103310, Pcdha12, protocadherin alpha 12, [Score=181, Expect=6e-46]; ENSMUSG00000102206, Pcdha11, protocadherin alpha 11, [Score=179, Expect=1e-45]; ENSMUSG00000103442, Pcdha1, protocadherin alpha 1, [Score=176, Expect=9e-45]} {Dmel: FBgn0001075, ft, fat, [Score=154, Expect=3e-37]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=122, Expect=1e-27]} {Smed: dd_Smed_v6_5930_0_1, dd_Smed_v6_5930_0_1, [RH, Score=259, Expect=3e-71]} {RNA1509_50526} {RNA1310_8485, RNA1509_50526} {RNA1509_50526, RNA815_17363}

Cumulative graph for MligTC455_22538

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 3.297 0.62 0.99991 1.00000
RegionR2 -0.485 0.62 0.99963 1.00000
RegionR3 -1.408 0.62 0.99980 1.00000
RegionR4 0.694 0.62 0.99996 1.00000
RegionR5 -1.675 0.62 0.99988 1.00000
RegionR6 -1.481 0.62 0.99972 1.00000
RegionR7 0.507 0.62 0.99970 1.00000
RegionR8 0.55 0.62 0.99950 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.045 0.62 0.99988 1.00000
RegenerationR2 1.921 0.62 0.01510 0.20124
RegenerationR3 1.061 0.62 0.98419 1.00000
RegenerationR4 0.871 0.62 0.99516 1.00000
RegenerationR5 1.664 0.62 0.94563 1.00000
RegenerationR6 0.813 0.62 0.89034 1.00000
RegenerationBL -1.88 0.62 1.00000 1.00000
RegenerationTP 1.796 0.62 0.99541 1.00000


Genes with expression patterns similar to MligTC455_22538

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22538 12 0.25 Mlig455_031920

Neo: -

Age: logFC(26M/2M)=-0.408

 PCDHA2 1 - - - - 1.000 - Mlig455_031920 {REF} {Length: 4404} {Pfam: Cadherin domain [PF00028.19, score=209.1]; Cadherin-like [PF16184.7, score=43.8]; Cadherin-like [PF08266.14, score=27.8]} {Human: ENSG00000204969, PCDHA2, protocadherin alpha 2, [Score=183, Expect=1e-46]; ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=180, Expect=9e-46]; ENSG00000204963, PCDHA7, protocadherin alpha 7, [Score=179, Expect=2e-45]; ENSG00000242419, PCDHGC4, protocadherin gamma subfamily C, 4, [Score=178, Expect=4e-45]} {Mouse: ENSMUSG00000104148, Pcdha2, protocadherin alpha 2, [Score=185, Expect=2e-47]; ENSMUSG00000007440, Pcdha11, protocadherin alpha 11, [Score=182, Expect=1e-46]; ENSMUSG00000103310, Pcdha12, protocadherin alpha 12, [Score=181, Expect=6e-46]; ENSMUSG00000102206, Pcdha11, protocadherin alpha 11, [Score=179, Expect=1e-45]; ENSMUSG00000103442, Pcdha1, protocadherin alpha 1, [Score=176, Expect=9e-45]} {Dmel: FBgn0001075, ft, fat, [Score=154, Expect=3e-37]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=122, Expect=1e-27]} {Smed: dd_Smed_v6_5930_0_1, dd_Smed_v6_5930_0_1, [RH, Score=259, Expect=3e-71]} {RNA1509_50526} {RNA1310_8485, RNA1509_50526} {RNA1509_50526, RNA815_17363}
2. MligTC455_26587 171 3.56 Mlig455_001844

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.297

 MYH10 0.955 - - - - 0.955 - Mlig455_001844 {REF} {Length: 9171} {Pfam: Myosin head (motor domain) [PF00063.23, score=1069.2]; Myosin tail [PF01576.21, score=835.3]; Myosin N-terminal SH3-like domain [PF02736.21, score=50.1]; QLQ [PF08880.13, score=23.9]} {Human: ENSG00000133026, MYH10, myosin heavy chain 10, [Score=1512, Expect=0.0]; ENSG00000100345, MYH9, myosin heavy chain 9, [Score=1497, Expect=0.0]; ENSG00000133392, MYH11, myosin heavy chain 11, [Score=1484, Expect=0.0]; ENSG00000276480, MYH11, myosin heavy chain 11, [Score=1484, Expect=0.0]} {Mouse: ENSMUSG00000020900, Myh10, myosin, heavy polypeptide 10, non-muscle, [Score=1514, Expect=0.0]; ENSMUSG00000022443, Myh9, myosin, heavy polypeptide 9, non-muscle, [Score=1505, Expect=0.0]; ENSMUSG00000018830, Myh11, myosin, heavy polypeptide 11, smooth muscle, [Score=1469, Expect=0.0]} {Dmel: FBgn0265434, zip, zipper, [Score=1660, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_2912_0_1, dd_Smed_v6_2912_0_1, [Score=1388, Expect=0.0]} {RNA1509_6218} {RNA1310_666} {RNA815_1591}
3. MligTC455_25375 385 8.03 Mlig455_008124, Mlig455_015606

Neo: -

Age: Up-Down-Down

 ADAR 0.953 - - - - 0.953 -

Mlig455_008124 {REF} {Length: 4266} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=269.5]; Double-stranded RNA binding motif [PF00035.28, score=70.4]; Adenosine deaminase z-alpha domain [PF02295.19, score=25.4]} {Human: ENSG00000160710, ADAR, adenosine deaminase, RNA specific, [RH, Score=324, Expect=9e-94]} {Mouse: ENSMUSG00000027951, Adar, adenosine deaminase, RNA-specific, [RH, Score=321, Expect=4e-93]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [Score=242, Expect=9e-69]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [Score=160, Expect=1e-41]} {Smed: dd_Smed_v6_8562_0_1, dd_Smed_v6_8562_0_1, [RH, Score=286, Expect=8e-84]} {RNA1509_10232} {RNA1310_1256} {RNA815_4377}

Mlig455_015606 {REF} {Length: 3976} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=269.4]; Double-stranded RNA binding motif [PF00035.28, score=70.7]; Adenosine deaminase z-alpha domain [PF02295.19, score=26.9]} {Human: ENSG00000160710, ADAR, adenosine deaminase, RNA specific, [RH, Score=323, Expect=2e-93]} {Mouse: ENSMUSG00000027951, Adar, adenosine deaminase, RNA-specific, [RH, Score=321, Expect=6e-93]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [Score=242, Expect=1e-68]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [Score=160, Expect=1e-41]} {Smed: dd_Smed_v6_8562_0_1, dd_Smed_v6_8562_0_1, [RH, Score=286, Expect=9e-84]} {RNA1509_10232} {RNA1310_1256} {RNA815_4377}

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