Data search
Results for MligTC455_26587
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_26587 | 171 | 3.56 | Mlig455_001844 | Neo: - |
MYH10 | Mlig455_001844 {REF} {Length: 9171} {Pfam: Myosin head (motor domain) [PF00063.23, score=1069.2]; Myosin tail [PF01576.21, score=835.3]; Myosin N-terminal SH3-like domain [PF02736.21, score=50.1]; QLQ [PF08880.13, score=23.9]} {Human: ENSG00000133026, MYH10, myosin heavy chain 10, [Score=1512, Expect=0.0]; ENSG00000100345, MYH9, myosin heavy chain 9, [Score=1497, Expect=0.0]; ENSG00000133392, MYH11, myosin heavy chain 11, [Score=1484, Expect=0.0]; ENSG00000276480, MYH11, myosin heavy chain 11, [Score=1484, Expect=0.0]} {Mouse: ENSMUSG00000020900, Myh10, myosin, heavy polypeptide 10, non-muscle, [Score=1514, Expect=0.0]; ENSMUSG00000022443, Myh9, myosin, heavy polypeptide 9, non-muscle, [Score=1505, Expect=0.0]; ENSMUSG00000018830, Myh11, myosin, heavy polypeptide 11, smooth muscle, [Score=1469, Expect=0.0]} {Dmel: FBgn0265434, zip, zipper, [Score=1660, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_2912_0_1, dd_Smed_v6_2912_0_1, [Score=1388, Expect=0.0]} {RNA1509_6218} {RNA1310_666} {RNA815_1591} |
Cumulative graph for MligTC455_26587
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.418 | 2.509 | 0.39785 | 1.00000 | |
| RegionR2 | 1.423 | 2.509 | 0.09564 | 0.37935 | |
| RegionR3 | 0.091 | 2.509 | 0.88830 | 1.00000 | |
| RegionR4 | -0.76 | 2.509 | 0.31362 | 0.62915 | |
| RegionR5 | -0.749 | 2.509 | 0.19415 | 0.48000 | |
| RegionR6 | -0.243 | 2.509 | 0.70203 | 1.00000 | |
| RegionR7 | 0.517 | 2.509 | 0.54625 | 1.00000 | |
| RegionR8 | 1.137 | 2.509 | 0.27488 | 0.89879 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.066 | 2.509 | 0.63233 | 1.00000 | |
| RegenerationR2 | 0.112 | 2.509 | 0.88336 | 1.00000 | |
| RegenerationR3 | 0.386 | 2.509 | 0.61604 | 0.91545 | |
| RegenerationR4 | -0.592 | 2.509 | 0.46992 | 0.85361 | |
| RegenerationR5 | 0.819 | 2.509 | 0.23348 | 0.66725 | |
| RegenerationR6 | 1.172 | 2.509 | 0.14597 | 0.46809 | |
| RegenerationBL | -4.895 | 2.509 | 0.03682 | 0.21682 | |
| RegenerationTP | 0.505 | 2.509 | 0.60525 | 0.96402 |
Genes with expression patterns similar to MligTC455_26587
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_26587 | 171 | 3.56 | Mlig455_001844 | Neo: - |
MYH10 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001844 {REF} {Length: 9171} {Pfam: Myosin head (motor domain) [PF00063.23, score=1069.2]; Myosin tail [PF01576.21, score=835.3]; Myosin N-terminal SH3-like domain [PF02736.21, score=50.1]; QLQ [PF08880.13, score=23.9]} {Human: ENSG00000133026, MYH10, myosin heavy chain 10, [Score=1512, Expect=0.0]; ENSG00000100345, MYH9, myosin heavy chain 9, [Score=1497, Expect=0.0]; ENSG00000133392, MYH11, myosin heavy chain 11, [Score=1484, Expect=0.0]; ENSG00000276480, MYH11, myosin heavy chain 11, [Score=1484, Expect=0.0]} {Mouse: ENSMUSG00000020900, Myh10, myosin, heavy polypeptide 10, non-muscle, [Score=1514, Expect=0.0]; ENSMUSG00000022443, Myh9, myosin, heavy polypeptide 9, non-muscle, [Score=1505, Expect=0.0]; ENSMUSG00000018830, Myh11, myosin, heavy polypeptide 11, smooth muscle, [Score=1469, Expect=0.0]} {Dmel: FBgn0265434, zip, zipper, [Score=1660, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_2912_0_1, dd_Smed_v6_2912_0_1, [Score=1388, Expect=0.0]} {RNA1509_6218} {RNA1310_666} {RNA815_1591} |
| 2. | MligTC455_50068 | 44 | 0.91 | Mlig455_061009 | Neo: - Age: - |
1.705 | - | - | - | 0.958 | 0.747 | - | Mlig455_061009 {REF} {Length: 1075} {RNA1509_52261} {RNA1310_84643} {RNA815_3382.1} | |
| 3. | MligTC455_30210 | 1201 | 25.03 | Mlig455_045548, Mlig455_052635 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.241 Region-enriched R4: 3.665/0.03756 |
1.678 | - | - | - | 0.955 | - | 0.723 | Mlig455_045548 {REF} {Length: 752} {RNA1509_16128} {RNA1310_62171} {RNA815_19510.2} Mlig455_052635 {REF} {Length: 752} {RNA1509_16128} {RNA1310_62171} {RNA815_19510.2} |
|
| 4. | MligTC455_17443 | 28 | 0.58 | Mlig455_043145 | Neo: - Age: - |
0.985 | - | - | - | 0.985 | - | - | Mlig455_043145 {REF} {Length: 1166} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=21.9]} {Smed: dd_Smed_v6_10825_0_1, dd_Smed_v6_10825_0_1, [RH, Score=95.9, Expect=8e-25]} {RNA1509_7355} {RNA1310_104476} {RNA815_29001.2} | |
| 5. | MligTC455_25375 | 385 | 8.03 | Mlig455_008124, Mlig455_015606 | Neo: - Age: Up-Down-Down |
ADAR | 0.973 | - | - | - | - | 0.973 | - | Mlig455_008124 {REF} {Length: 4266} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=269.5]; Double-stranded RNA binding motif [PF00035.28, score=70.4]; Adenosine deaminase z-alpha domain [PF02295.19, score=25.4]} {Human: ENSG00000160710, ADAR, adenosine deaminase, RNA specific, [RH, Score=324, Expect=9e-94]} {Mouse: ENSMUSG00000027951, Adar, adenosine deaminase, RNA-specific, [RH, Score=321, Expect=4e-93]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [Score=242, Expect=9e-69]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [Score=160, Expect=1e-41]} {Smed: dd_Smed_v6_8562_0_1, dd_Smed_v6_8562_0_1, [RH, Score=286, Expect=8e-84]} {RNA1509_10232} {RNA1310_1256} {RNA815_4377} Mlig455_015606 {REF} {Length: 3976} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=269.4]; Double-stranded RNA binding motif [PF00035.28, score=70.7]; Adenosine deaminase z-alpha domain [PF02295.19, score=26.9]} {Human: ENSG00000160710, ADAR, adenosine deaminase, RNA specific, [RH, Score=323, Expect=2e-93]} {Mouse: ENSMUSG00000027951, Adar, adenosine deaminase, RNA-specific, [RH, Score=321, Expect=6e-93]} {Dmel: FBgn0026086, Adar, Adenosine deaminase acting on RNA, [Score=242, Expect=1e-68]} {Celegans: WBGene00000080, adr-2, Probable double-stranded RNA-specific adenosine deaminase, [Score=160, Expect=1e-41]} {Smed: dd_Smed_v6_8562_0_1, dd_Smed_v6_8562_0_1, [RH, Score=286, Expect=9e-84]} {RNA1509_10232} {RNA1310_1256} {RNA815_4377} |
| 6. | MligTC455_07920 | 131 | 2.73 | Mlig455_029217 | Neo: - Age: - Region-enriched R6: 5.473/0.00039 |
OSR1 | 0.972 | - | - | - | 0.972 | - | - | Mlig455_029217 {REF} {Length: 1175} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.3]; Zinc-finger double domain [PF13465.8, score=46.0]; C2H2-type zinc finger [PF13894.8, score=40.7]; C2H2-type zinc finger [PF13912.8, score=28.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.7]} {Human: ENSG00000143867, OSR1, odd-skipped related transciption factor 1, [RH, Score=178, Expect=8e-55]; ENSG00000164920, OSR2, odd-skipped related transciption factor 2, [RH, Score=171, Expect=1e-51]} {Mouse: ENSMUSG00000048387, Osr1, odd-skipped related transcription factor 1, [RH, Score=176, Expect=3e-54]; ENSMUSG00000022330, Osr2, odd-skipped related 2, [RH, Score=171, Expect=5e-52]} {Dmel: FBgn0002985, odd, odd skipped, [RH, Score=159, Expect=2e-46]} {Celegans: WBGene00003846, odd-2, Protein odd-skipped-related 2, [RH, Score=170, Expect=4e-52]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [RH, Score=189, Expect=3e-59]} {RNA1509_57522} {RNA1310_38770} {RNA815_13682.1} |
| 7. | MligTC455_12668 | 71 | 1.48 | Mlig455_062981, Mlig455_062987 | Neo: - Age: - |
0.964 | - | - | - | 0.964 | - | - | Mlig455_062981 {REF} {Length: 1508} {RNA1509_39161} {RNA1310_17318} {RNA815_13240} Mlig455_062987 {REF} {Length: 1610} {RNA1509_39161} {RNA1310_17318} {RNA815_13240} |
|
| 8. | MligTC455_15964 | 150 | 3.13 | Mlig455_041648 | Neo: - Age: - |
SMAD4 | 0.959 | - | - | - | 0.959 | - | - | Mlig455_041648 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=213.5]; MH1 domain [PF03165.18, score=129.8]} {Human: ENSG00000141646, SMAD4, SMAD family member 4, [Score=447, Expect=1e-153]} {Mouse: ENSMUSG00000024515, Smad4, SMAD family member 4, [Score=442, Expect=6e-151]} {Dmel: FBgn0011655, Med, Medea, [Score=278, Expect=1e-85]} {Celegans: WBGene00004858, sma-4, Dwarfin sma-4, [Score=288, Expect=5e-91]} {Smed: dd_Smed_v6_1923_0_1, dd_Smed_v6_1923_0_1, [Score=282, Expect=4e-88]} {RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1310_15699.1, RNA1509_20434, RNA1509_52834, RNA1509_58190} {RNA1509_20434, RNA1509_52834, RNA1509_58190, RNA815_20871} |
| 9. | MligTC455_19002 | 593 | 12.36 | Mlig455_042636 | Neo: - Age: - |
RAB4A | 0.955 | - | - | - | - | 0.955 | - | Mlig455_042636 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=192.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=107.5]; ADP-ribosylation factor family [PF00025.23, score=46.0]; 50S ribosome-binding GTPase [PF01926.25, score=22.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000168118, RAB4A, RAB4A, member RAS oncogene family, [RH, Score=315, Expect=1e-109]; ENSG00000167578, RAB4B, RAB4B, member RAS oncogene family, [RH, Score=310, Expect=8e-108]; ENSG00000171570, RAB4B-EGLN2, RAB4B-EGLN2 readthrough (NMD candidate), [RH, Score=310, Expect=8e-108]} {Mouse: ENSMUSG00000019478, Rab4a, RAB4A, member RAS oncogene family, [RH, Score=314, Expect=1e-109]; ENSMUSG00000053291, Rab4b, RAB4B, member RAS oncogene family, [RH, Score=310, Expect=5e-108]} {Dmel: FBgn0016701, Rab4, [RH, Score=308, Expect=1e-107]} {Celegans: WBGene00004276, rab-14, RAB family, [Score=247, Expect=1e-83]} {Smed: dd_Smed_v6_8106_0_1, dd_Smed_v6_8106_0_1, [RH, Score=257, Expect=2e-87]} {RNA1509_11473} {RNA1310_40054, RNA1509_11473} {RNA1509_11473, RNA815_18978} |
| 10. | MligTC455_22538 | 12 | 0.25 | Mlig455_031920 | Neo: - Age: logFC(26M/2M)=-0.408 |
PCDHA2 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_031920 {REF} {Length: 4404} {Pfam: Cadherin domain [PF00028.19, score=209.1]; Cadherin-like [PF16184.7, score=43.8]; Cadherin-like [PF08266.14, score=27.8]} {Human: ENSG00000204969, PCDHA2, protocadherin alpha 2, [Score=183, Expect=1e-46]; ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=180, Expect=9e-46]; ENSG00000204963, PCDHA7, protocadherin alpha 7, [Score=179, Expect=2e-45]; ENSG00000242419, PCDHGC4, protocadherin gamma subfamily C, 4, [Score=178, Expect=4e-45]} {Mouse: ENSMUSG00000104148, Pcdha2, protocadherin alpha 2, [Score=185, Expect=2e-47]; ENSMUSG00000007440, Pcdha11, protocadherin alpha 11, [Score=182, Expect=1e-46]; ENSMUSG00000103310, Pcdha12, protocadherin alpha 12, [Score=181, Expect=6e-46]; ENSMUSG00000102206, Pcdha11, protocadherin alpha 11, [Score=179, Expect=1e-45]; ENSMUSG00000103442, Pcdha1, protocadherin alpha 1, [Score=176, Expect=9e-45]} {Dmel: FBgn0001075, ft, fat, [Score=154, Expect=3e-37]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=122, Expect=1e-27]} {Smed: dd_Smed_v6_5930_0_1, dd_Smed_v6_5930_0_1, [RH, Score=259, Expect=3e-71]} {RNA1509_50526} {RNA1310_8485, RNA1509_50526} {RNA1509_50526, RNA815_17363} |
| 11. | MligTC455_47004 | 371 | 7.72 | Mlig455_007268 | Neo: - Age: Down-Up-Up |
OGFOD1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_007268 {REF} {Length: 1419} {Pfam: Oxoglutarate and iron-dependent oxygenase degradation C-term [PF10637.11, score=46.5]} {Human: ENSG00000087263, OGFOD1, 2-oxoglutarate and iron dependent oxygenase domain containing 1, [Score=86.3, Expect=5e-19]} {Mouse: ENSMUSG00000033009, Ogfod1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1, [Score=85.5, Expect=6e-19]} {RNA1509_32662, RNA1509_50798} {RNA1310_19206, RNA1509_32662, RNA1509_50798} {RNA1509_32662, RNA1509_50798, RNA815_18604} |
| 12. | MligTC455_35031 | 12 | 0.26 | Mlig455_019070, Mlig455_064298 | Neo: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_019070 {REF} {Length: 5629} {TRANSSPLICED} {Pfam: UME (NUC010) domain [PF08064.15, score=20.4]} {Dmel: FBgn0004367, mei-41, meiotic 41, [Score=62.8, Expect=3e-09]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [Score=66.2, Expect=1e-10]} {RNA1509_16317} {RNA1310_11255} {RNA815_33749} Mlig455_064298 {REF} {Length: 3322} {TRANSSPLICED} {Pfam: UME (NUC010) domain [PF08064.15, score=20.4]} {Dmel: FBgn0004367, mei-41, meiotic 41, [Score=62.8, Expect=3e-09]} {Smed: dd_Smed_v6_8754_0_1, dd_Smed_v6_8754_0_1, [Score=66.2, Expect=1e-10]} {RNA1509_16317} {RNA1310_36433} {RNA815_52815} |
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