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Results for MligTC455_22875

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22875 197 4.10 Mlig455_031908, Mlig455_045532, Mlig455_049396

Neo: -

Age: -

Mlig455_031908 {REF} {Length: 388} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_25119} {RNA815_11593}

Mlig455_045532 {REF} {Length: 924} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Mlig455_049396 {REF} {Length: 738} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Cumulative graph for MligTC455_22875

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.752 2.495 0.34931 0.99318
RegionR2 1.041 2.495 0.41370 0.80675
RegionR3 1.69 2.495 0.08743 0.52283
RegionR4 0.266 2.495 0.74660 1.00000
RegionR5 0.206 2.495 0.77306 1.00000
RegionR6 -1.633 2.495 0.99838 1.00000
RegionR7 0.6 2.495 0.65662 1.00000
RegionR8 2.583 2.495 0.05121 0.44177

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.292 2.495 1.00000 1.00000
RegenerationR2 1.303 2.495 0.11225 0.52312
RegenerationR3 0.478 2.495 0.59444 0.90566
RegenerationR4 0.33 2.495 0.73525 0.96607
RegenerationR5 1.534 2.495 0.08578 0.45142
RegenerationR6 3.558 2.495 0.00277 0.06035
RegenerationBL 0.212 2.495 0.83904 1.00000
RegenerationTP 2.192 2.495 0.01630 0.21937


Genes with expression patterns similar to MligTC455_22875

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22875 197 4.1 Mlig455_031908, Mlig455_045532, Mlig455_049396

Neo: -

Age: -

 5 1.000 - 1.000 1.000 1.000 1.000

Mlig455_031908 {REF} {Length: 388} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_25119} {RNA815_11593}

Mlig455_045532 {REF} {Length: 924} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Mlig455_049396 {REF} {Length: 738} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}
2. MligTC455_12510 323 6.72 Mlig455_038484, Mlig455_052307

Neo: -

Age: Down-Up-Up

 1.748 - - - 0.798 - 0.950

Mlig455_038484 {REF} {Length: 1308} {RNA1310_25487.2} {RNA815_10689}

Mlig455_052307 {REF} {Length: 1483} {RNA1509_18097} {RNA1310_25487.2} {RNA815_10689}
3. MligTC455_16728 24 0.5 Mlig455_046897

Neo: -

Age: Down-Up-Up

 0.984 - - 0.984 - - - Mlig455_046897 {REF} {Length: 2092} {RNA1509_37695} {RNA1310_52562.1} {RNA815_33274}
4. MligTC455_10360 76 1.58 Mlig455_005573

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.671

 0.974 - - - - 0.974 - Mlig455_005573 {REF} {Length: 2297} {TRANSSPLICED} {RNA1310_35838.2} {RNA815_17439}
5. MligTC455_22470 91 1.9 Mlig455_021093, Mlig455_030247

Neo: -

Age: -

 0.969 - - 0.969 - - -

Mlig455_021093 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_36899} {RNA1310_58645} {RNA815_47584}

Mlig455_030247 {REF} {Length: 5623} {RNA1509_32404} {RNA1310_63918} {RNA815_8305}
6. MligTC455_11889 66 1.37 Mlig455_040154

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_040154 {REF} {Length: 1508} {RNA1509_18432} {RNA1310_134295} {RNA815_29071}
7. MligTC455_22013 85 1.78 Mlig455_005596, Mlig455_053497, Mlig455_062221

Neo: -

Age: Up-Down-Down

 RTL1 0.966 - - 0.966 - - -

Mlig455_005596 {REF} {Length: 4617} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.3]; Integrase zinc binding domain [PF17921.3, score=62.4]; Integrase core domain [PF00665.28, score=40.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.3, Expect=1e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.2, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=243, Expect=2e-68]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192}

Mlig455_053497 {REF} {Length: 2290} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=48.6]; 2-cysteine adaptor domain [PF08793.12, score=38.9]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=38.0]; Suppressor of cytokine signalling [PF12610.10, score=19.9]; Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain [PF17927.3, score=19.5]} {RNA1509_39864} {RNA1310_103404} {RNA815_38442}

Mlig455_062221 {REF} {Length: 3363} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.5]; Aspartyl protease [PF13650.8, score=26.8]; PNMA [PF14893.8, score=21.9]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=62.4, Expect=4e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=179, Expect=3e-46]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192}
8. MligTC455_42993 588 12.25 Mlig455_069283

Neo: -

Age: logFC(26M/2M)=0.453

Regeneration-upregulated TP: 2.584

Regeneration-enriched TP: 2.584

 0.959 - - - - 0.959 - Mlig455_069283 {REF} {Length: 1439} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=99.9]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=103, Expect=7e-29]} {RNA1509_32369, RNA1509_50509, RNA1509_58904, RNA1509_59453} {RNA1310_23953.1, RNA1509_32369, RNA1509_50509, RNA1509_58904, RNA1509_59453} {RNA1509_32369, RNA1509_50509, RNA1509_58904, RNA1509_59453, RNA815_10379}
9. MligTC455_28684 179 3.74 Mlig455_027569

Neo: -

Age: Down-Up-Up

 0.953 - - - - 0.953 - Mlig455_027569 {REF} {Length: 1247} {RNA1509_49958} {RNA1310_47608, RNA1509_49958} {RNA1509_49958, RNA815_33601}
10. MligTC455_52273 134 2.79 Mlig455_014598

Neo: -

Age: Up-Down-Down

 0.953 - - - - 0.953 - Mlig455_014598 {REF} {Length: 2227} {NoTransDecoderORF} {RNA1509_27455} {RNA1310_27102.1, RNA1509_27455} {RNA1509_27455, RNA815_38357}

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