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Results for MligTC455_22013

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22013 85 1.78 Mlig455_005596, Mlig455_053497, Mlig455_062221

Neo: -

Age: Up-Down-Down

 RTL1

Mlig455_005596 {REF} {Length: 4617} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.3]; Integrase zinc binding domain [PF17921.3, score=62.4]; Integrase core domain [PF00665.28, score=40.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.3, Expect=1e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.2, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=243, Expect=2e-68]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192}

Mlig455_053497 {REF} {Length: 2290} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=48.6]; 2-cysteine adaptor domain [PF08793.12, score=38.9]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=38.0]; Suppressor of cytokine signalling [PF12610.10, score=19.9]; Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain [PF17927.3, score=19.5]} {RNA1509_39864} {RNA1310_103404} {RNA815_38442}

Mlig455_062221 {REF} {Length: 3363} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.5]; Aspartyl protease [PF13650.8, score=26.8]; PNMA [PF14893.8, score=21.9]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=62.4, Expect=4e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=179, Expect=3e-46]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192}

Cumulative graph for MligTC455_22013

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.71 1.745 0.41970 1.00000
RegionR2 1.602 1.745 0.41572 0.80862
RegionR3 2.248 1.745 0.18617 0.72091
RegionR4 -1.203 1.745 0.53318 0.85667
RegionR5 1.113 1.745 0.45396 0.81590
RegionR6 0.95 1.745 0.53071 1.00000
RegionR7 1.584 1.745 0.29190 0.92646
RegionR8 -3.584 1.745 0.24244 0.85920

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.912 1.745 0.58904 1.00000
RegenerationR2 -0.416 1.745 0.80439 0.99100
RegenerationR3 -2.918 1.745 0.11894 0.53678
RegenerationR4 1.288 1.745 0.49571 0.86728
RegenerationR5 0.435 1.745 0.80467 0.98980
RegenerationR6 -0.794 1.745 0.67906 0.91370
RegenerationBL -4.008 1.745 0.27151 0.63128
RegenerationTP 1.248 1.745 0.58992 0.95485


Genes with expression patterns similar to MligTC455_22013

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22013 85 1.78 Mlig455_005596, Mlig455_053497, Mlig455_062221

Neo: -

Age: Up-Down-Down

 RTL1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_005596 {REF} {Length: 4617} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.3]; Integrase zinc binding domain [PF17921.3, score=62.4]; Integrase core domain [PF00665.28, score=40.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=31.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.3, Expect=1e-16]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.2, Expect=4e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=243, Expect=2e-68]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192}

Mlig455_053497 {REF} {Length: 2290} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=48.6]; 2-cysteine adaptor domain [PF08793.12, score=38.9]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=38.0]; Suppressor of cytokine signalling [PF12610.10, score=19.9]; Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain [PF17927.3, score=19.5]} {RNA1509_39864} {RNA1310_103404} {RNA815_38442}

Mlig455_062221 {REF} {Length: 3363} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.5]; Aspartyl protease [PF13650.8, score=26.8]; PNMA [PF14893.8, score=21.9]; Retroviral aspartyl protease [PF00077.22, score=20.7]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=62.4, Expect=4e-09]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=179, Expect=3e-46]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192}
2. MligTC455_22024 15 0.32 Mlig455_020103, Mlig455_069893

Neo: Int S/G2/M

Age: -

 1.812 0.861 - - - 0.951 -

Mlig455_020103 {REF} {Length: 2186} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=33.6]; Aspartyl protease [PF13650.8, score=27.9]; PNMA [PF14893.8, score=24.8]; Retroviral aspartyl protease [PF00077.22, score=22.0]} {RNA1509_39864} {RNA1310_9809} {RNA815_20192}

Mlig455_069893 {REF} {Length: 2527} {Pfam: PNMA [PF14893.8, score=25.8]; Aspartyl protease [PF13650.8, score=19.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=19.4]} {RNA1509_38146} {RNA1310_9809} {RNA815_20192}
3. MligTC455_10154 7 0.15 Mlig455_046659

Neo: -

Age: -

 0.998 - - - - 0.998 - Mlig455_046659 {REF} {Length: 491} {NoTransDecoderORF} {RNA1509_5197} {RNA1310_86332} {RNA815_1966}
4. MligTC455_09522 4 0.09 Mlig455_053609

Neo: -

Age: -

 ZBTB11 0.991 - - - - 0.991 - Mlig455_053609 {REF} {Length: 1672} {Pfam: Integrase zinc binding domain [PF17921.3, score=67.6]; H2C2 zinc finger [PF09337.12, score=25.1]} {Human: ENSG00000066422, ZBTB11, zinc finger and BTB domain containing 11, [RH, Score=58.9, Expect=3e-10]} {Mouse: ENSMUSG00000022601, Zbtb11, zinc finger and BTB domain containing 11, [Score=56.2, Expect=6e-09]} {RNA1509_33402} {RNA1310_64177} {RNA815_44272}
5. MligTC455_01770 3 0.05 Mlig455_066385

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_066385 {REF} {Length: 1023} {NoTransDecoderORF} {RNA1509_22897} {RNA1310_82029}
6. MligTC455_37923 25 0.52 Mlig455_029843

Neo: -

Age: -

 0.979 - - - - 0.979 - Mlig455_029843 {REF} {Length: 657} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.1} {RNA815_36932.1}
7. MligTC455_11603 6 0.12 Mlig455_046639

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_046639 {REF} {Length: 395} {NoTransDecoderORF} {RNA1509_56382} {RNA1310_86332} {RNA815_16344.2}
8. MligTC455_41909 3 0.07 Mlig455_032661

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_032661 {REF} {Length: 1046} {RNA1310_74699} {RNA815_34259}
9. MligTC455_57008 10 0.22 Mlig455_044186

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_044186 {REF} {Length: 852} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.6]} {RNA1509_47056} {RNA1310_46488.2} {RNA815_14744.1}
10. MligTC455_27381 18 0.38 Mlig455_005326, Mlig455_056074, Mlig455_071072

Neo: -

Age: -

 0.97 - - - - 0.970 -

Mlig455_005326 {REF} {Length: 1415} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696}

Mlig455_056074 {REF} {Length: 2219} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696}

Mlig455_071072 {REF} {Length: 2219} {TRANSSPLICED} {RNA1509_24579} {RNA1310_5913.1} {RNA815_3696}
11. MligTC455_00421 18 0.38 Mlig455_015214, Mlig455_027173

Neo: -

Age: -

 0.967 - - - - 0.967 -

Mlig455_015214 {REF} {Length: 694} {RNA1310_16130}

Mlig455_027173 {REF} {Length: 692} {RNA1310_16130}
12. MligTC455_22875 197 4.1 Mlig455_031908, Mlig455_045532, Mlig455_049396

Neo: -

Age: -

 0.966 - - 0.966 - - -

Mlig455_031908 {REF} {Length: 388} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_25119} {RNA815_11593}

Mlig455_045532 {REF} {Length: 924} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}

Mlig455_049396 {REF} {Length: 738} {NoTransDecoderORF} {RNA1509_13897} {RNA1310_19938.1} {RNA815_11593}
13. MligTC455_28343 63 1.31 Mlig455_068349

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_068349 {REF} {Length: 1140} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_31268} {RNA1310_62764} {RNA815_21467}
14. MligTC455_22272 6 0.13 Mlig455_050013

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_050013 {REF} {Length: 1355} {NoTransDecoderORF} {RNA1509_12830} {RNA1310_79708} {RNA815_9685.1}
15. MligTC455_53595 20 0.42 Mlig455_067432

Neo: -

Age: -

 SLC24A2 0.963 - - - - 0.963 - Mlig455_067432 {REF} {Length: 4224} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=186.7]} {Human: ENSG00000155886, SLC24A2, solute carrier family 24 member 2, [RH, Score=498, Expect=4e-168]} {Mouse: ENSMUSG00000037996, Slc24a2, solute carrier family 24 (sodium/potassium/calcium exchanger), member 2, [RH, Score=502, Expect=2e-169]} {Dmel: FBgn0028704, Nckx30C, [RH, Score=499, Expect=2e-166]} {Celegans: WBGene00003569, ncx-4, Na/Ca eXchangers, [Score=223, Expect=3e-64]} {Smed: dd_Smed_v6_5868_0_4, dd_Smed_v6_5868_0_4, [Score=184, Expect=9e-51]} {RNA1509_26587} {RNA1310_76563} {RNA815_21902.1}
16. MligTC455_16728 24 0.5 Mlig455_046897

Neo: -

Age: Down-Up-Up

 0.962 - - 0.962 - - - Mlig455_046897 {REF} {Length: 2092} {RNA1509_37695} {RNA1310_52562.1} {RNA815_33274}
17. MligTC455_29859 11 0.22 Mlig455_011021

Neo: -

Age: -

 ITPR1 0.961 - - - - 0.961 - Mlig455_011021 {REF} {Length: 2073} {Pfam: Ion transport protein [PF00520.33, score=19.8]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=154, Expect=1e-38]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=138, Expect=1e-33]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=136, Expect=3e-33]} {Smed: dd_Smed_v6_3814_1_2, dd_Smed_v6_3814_1_2, [Score=551, Expect=0.0]} {RNA1509_25537} {RNA1310_434.1} {RNA815_101}
18. MligTC455_18485 31 0.64 Mlig455_025676

Neo: -

Age: logFC(26M/2M)=-0.535

 BEST3 0.957 - - 0.957 - - - Mlig455_025676 {REF} {Length: 2042} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=192.0]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=130, Expect=4e-31]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=128, Expect=7e-31]; ENSMUSG00000020169, Best3, bestrophin 3, [Score=127, Expect=2e-30]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=122, Expect=6e-29]} {Celegans: WBGene00009340, best-14, Bestrophin homolog 14, [Score=110, Expect=7e-26]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=236, Expect=9e-71]} {RNA1509_5589} {RNA1310_3796.1} {RNA815_2846.1}
19. MligTC455_08038 8 0.18 Mlig455_002909

Neo: -

Age: -

 ARHGAP19 0.956 - - - - 0.956 - Mlig455_002909 {REF} {Length: 2124} {Pfam: RhoGAP domain [PF00620.29, score=73.7]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=80.5, Expect=2e-15]; ENSG00000269891, ARHGAP19-SLIT1, ARHGAP19-SLIT1 readthrough (NMD candidate), [Score=80.5, Expect=2e-15]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=79.3, Expect=4e-15]} {Dmel: FBgn0034249, RhoGAP54D, Rho GTPase activating protein at 54D, [Score=61.2, Expect=2e-09]} {Celegans: WBGene00013135, rga-2, Rho GTPase Activating protein, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=54.3, Expect=1e-07]} {RNA1310_147775}
20. MligTC455_53444 66 1.38 Mlig455_050873

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_050873 {REF} {Length: 2291} {Pfam: Methyltransferase FkbM domain [PF05050.14, score=33.9]} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=76.6, Expect=3e-16]} {RNA1509_37281} {RNA1310_6533.2} {RNA815_6407}
21. MligTC455_55680 10 0.21 Mlig455_008508

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_008508 {REF} {Length: 462} {NoTransDecoderORF}
22. MligTC455_32969 4 0.09 Mlig455_031795

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_031795 {REF} {Length: 1884}
23. MligTC455_56067 3 0.07 Mlig455_040324

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_040324 {REF} {Length: 282} {NoTransDecoderORF} {RNA1310_65693} {RNA815_1829.1}

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