TomoSeq data search

Data search

Results for MligTC455_23085

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_23085

70

1.46

Mlig455_009831

Neo: Int S/G2/M

Age: -

Regeneration-enriched R6: 6.951
Regeneration-enriched BL: 6.856
Regeneration-enriched R3: 6.339
Regeneration-enriched R5: 6.022
Regeneration-enriched R4: 6.001

ARHGAP19

Mlig455_009831 {REF} {Length: 4007} {Pfam: RhoGAP domain [PF00620.29, score=54.0]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=51.6, Expect=2e-06]} {RNA1310_80895} {RNA815_39927}

Cumulative graph for MligTC455_23085

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.104	1.41	0.99998	1.00000
RegionR2	2.335	1.41	0.99994	1.00000
RegionR3	0.756	1.41	1.00000	1.00000
RegionR4	-1.653	1.41	0.99988	1.00000
RegionR5	0.105	1.41	1.00000	1.00000
RegionR6	0.815	1.41	0.99997	1.00000
RegionR7	0.536	1.41	0.99997	1.00000
RegionR8	0.21	1.41	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.564	1.41	0.99999	1.00000
RegenerationR2	3.314	1.41	0.02193	0.24386
RegenerationR3	6.339	1.41	0.00007	0.00923
RegenerationR4	6.001	1.41	0.00008	0.00598
RegenerationR5	6.022	1.41	0.00000	0.00186
RegenerationR6	6.951	1.41	0.00001	0.00153
RegenerationBL	6.856	1.41	0.00002	0.00139
RegenerationTP	3.373	1.41	0.28536	0.73204

Genes with expression patterns similar to MligTC455_23085

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_23085	70	1.46	Mlig455_009831	Neo: Int S/G2/M Age: - Regeneration-enriched R6: 6.951 Regeneration-enriched BL: 6.856 Regeneration-enriched R3: 6.339 Regeneration-enriched R5: 6.022 Regeneration-enriched R4: 6.001	ARHGAP19	3	-	-	-	1.000	1.000	1.000	Mlig455_009831 {REF} {Length: 4007} {Pfam: RhoGAP domain [PF00620.29, score=54.0]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=51.6, Expect=2e-06]} {RNA1310_80895} {RNA815_39927}
2.	MligTC455_27697	32642	680.04	Mlig455_012396	Neo: - Age: - Region-enriched R6: 1.280/0.00010	ACTB	0.978	-	-	-	-	-	0.978	Mlig455_012396 {REF} {Length: 1679} {Pfam: Actin [PF00022.21, score=498.8]} {Human: ENSG00000075624, ACTB, actin beta, [RH, Score=759, Expect=0.0]; ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=758, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=759, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=758, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=730, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=763, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=763, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656} {RNA1310_19151, RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656} {RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656, RNA815_4929.1}
3.	MligTC455_27698	32400	675	Mlig455_012821	Neo: - Age: Down-Up-Up Region-enriched R6: 1.266/0.00012	ACTB	0.974	-	-	-	-	-	0.974	Mlig455_012821 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=498.8]} {Human: ENSG00000075624, ACTB, actin beta, [RH, Score=759, Expect=0.0]; ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=758, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=759, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=758, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=730, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=763, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=763, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_56827, RNA1509_7656} {RNA1310_19151, RNA1509_56827} {RNA1509_56827, RNA815_4929.1}
4.	MligTC455_17936	83	1.72	Mlig455_015624	Neo: - Age: -		0.966	-	-	-	0.966	-	-	Mlig455_015624 {REF} {Length: 700} {RNA1509_39987} {RNA1310_11976} {RNA815_1768.1}
5.	MligTC455_27636	71	1.47	Mlig455_006419	Neo: - Age: -	NOTCH2	0.966	-	-	-	-	-	0.966	Mlig455_006419 {REF} {Length: 5841} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=192.2]; Human growth factor-like EGF [PF12661.9, score=87.2]; Laminin G domain [PF02210.26, score=30.7]; EGF domain [PF12947.9, score=19.1]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=367, Expect=1e-103]; ENSG00000148400, NOTCH1, notch 1, [Score=361, Expect=1e-101]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=360, Expect=2e-101]; ENSMUSG00000026923, Notch1, notch 1, [Score=359, Expect=3e-101]; ENSMUSG00000038146, Notch3, notch 3, [Score=347, Expect=3e-97]; ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=342, Expect=3e-97]} {Dmel: FBgn0259685, crb, crumbs, [Score=425, Expect=4e-123]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=277, Expect=5e-75]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=308, Expect=4e-85]} {RNA1509_24110} {RNA1310_495.1} {RNA815_693.1}
6.	MligTC455_33415	37	0.78	Mlig455_068450	Neo: - Age: -		0.966	-	-	-	-	-	0.966	Mlig455_068450 {REF} {Length: 2144} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=36.0]} {RNA1509_12203} {RNA1310_114701} {RNA815_1471}
7.	MligTC455_50270	1381	28.78	Mlig455_043519	Neo: - Age: logFC(26M/2M)=-0.250 Regeneration-upregulated R5: 1.198 Regeneration-enriched R5: 1.198	PTK7	0.961	-	-	-	0.961	-	-	Mlig455_043519 {REF} {Length: 5584} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=169.2]; Immunoglobulin domain [PF13927.8, score=142.9]; Immunoglobulin I-set domain [PF07679.18, score=110.6]; Protein kinase domain [PF00069.27, score=107.3]; Immunoglobulin domain [PF00047.27, score=91.5]; Immunoglobulin V-set domain [PF07686.19, score=76.1]; Immunoglobulin domain [PF13895.8, score=68.2]; Kinase-like [PF14531.8, score=19.3]; Transmembrane protein 51 [PF15345.8, score=19.0]} {Human: ENSG00000112655, PTK7, protein tyrosine kinase 7 (inactive), [Score=152, Expect=8e-37]} {Mouse: ENSMUSG00000023972, Ptk7, PTK7 protein tyrosine kinase 7, [Score=147, Expect=4e-35]} {Dmel: FBgn0003502, Btk29A, Btk family kinase at 29A, [Score=137, Expect=8e-34]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=127, Expect=4e-30]} {Smed: dd_Smed_v6_6999_0_1, dd_Smed_v6_6999_0_1, [RH, Score=329, Expect=8e-94]} {RNA1509_41670, RNA1509_4351} {RNA1310_1753.1, RNA1509_41670} {RNA1509_41670, RNA815_731}
8.	MligTC455_00419	109	2.27	Mlig455_003934	Neo: - Age: -		0.957	-	-	-	0.957	-	-	Mlig455_003934 {REF} {Length: 780} {NoTransDecoderORF} {RNA1509_46406} {RNA1310_72097} {RNA815_61152.1}
9.	MligTC455_19206	81	1.68	Mlig455_005179	Neo: Int S/G2/M Age: -	TIMELESS	0.957	-	-	-	-	-	0.957	Mlig455_005179 {REF} {Length: 5270} {TRANSSPLICED} {Pfam: Timeless protein [PF04821.16, score=144.6]} {Human: ENSG00000111602, TIMELESS, timeless circadian regulator, [RH, Score=330, Expect=2e-93]} {Mouse: ENSMUSG00000039994, Timeless, timeless circadian clock 1, [RH, Score=321, Expect=2e-90]} {Dmel: FBgn0038118, timeout, [Score=250, Expect=4e-67]} {Celegans: WBGene00006571, tim-1, Protein timeless homolog, [RH, Score=146, Expect=5e-35]} {Smed: dd_Smed_v6_19257_0_2, dd_Smed_v6_19257_0_2, [RH, Score=235, Expect=9e-65]} {RNA1509_18295} {RNA1310_1716.2} {RNA815_12908}
10.	MligTC455_19219	189	3.93	Mlig455_060400	Neo: - Age: logFC(26M/2M)=0.407		0.957	-	-	-	0.957	-	-	Mlig455_060400 {REF} {Length: 2170} {Pfam: EF-hand domain pair [PF13499.8, score=79.6]; EF-hand domain [PF13405.8, score=63.7]; EF-hand domain pair [PF13833.8, score=62.4]; EF hand [PF00036.34, score=57.3]; EF hand [PF13202.8, score=40.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.2]} {Dmel: FBgn0026144, CBP, sarcoplasmic calcium-binding protein, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_1010_0_1, dd_Smed_v6_1010_0_1, [RH, Score=412, Expect=2e-143]} {RNA1509_14509} {RNA1310_13479, RNA1509_14509} {RNA1509_14509, RNA815_4591.1}
11.	MligTC455_19218	249	5.18	Mlig455_034022	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_034022 {REF} {Length: 2371} {Pfam: EF-hand domain pair [PF13499.8, score=79.6]; EF-hand domain [PF13405.8, score=63.7]; EF-hand domain pair [PF13833.8, score=62.4]; EF hand [PF00036.34, score=57.3]; EF hand [PF13202.8, score=40.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.2]} {Dmel: FBgn0026144, CBP, sarcoplasmic calcium-binding protein, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_1010_0_1, dd_Smed_v6_1010_0_1, [RH, Score=412, Expect=2e-143]} {RNA1509_14509} {RNA1310_13479} {RNA815_4591.1}
12.	MligTC455_16668	363	7.57	Mlig455_003774	Neo: - Age: Down-Down-Up	ESCO2	0.954	-	-	-	-	0.954	-	Mlig455_003774 {REF} {Length: 2119} {TRANSSPLICED} {Pfam: ESCO1/2 acetyl-transferase [PF13880.8, score=71.9]; zinc-finger of acetyl-transferase ESCO [PF13878.8, score=51.1]} {Human: ENSG00000171320, ESCO2, establishment of sister chromatid cohesion N-acetyltransferase 2, [RH, Score=129, Expect=4e-33]} {Mouse: ENSMUSG00000022034, Esco2, establishment of sister chromatid cohesion N-acetyltransferase 2, [RH, Score=123, Expect=2e-31]; ENSMUSG00000024293, Esco1, establishment of sister chromatid cohesion N-acetyltransferase 1, [RH, Score=117, Expect=2e-30]} {Celegans: WBGene00017269, F08F8.4, [RH, Score=68.6, Expect=4e-13]} {Smed: dd_Smed_v6_15894_0_1, dd_Smed_v6_15894_0_1, [RH, Score=152, Expect=5e-45]} {RNA1509_54656} {RNA1310_33289, RNA1509_54656} {RNA1509_54656, RNA815_18780}
13.	MligTC455_32543	639	13.31	Mlig455_029653	Neo: - Age: logFC(26M/2M)=0.536 Region-enriched R3: 1.366/0.03879		0.951	-	-	-	0.951	-	-	Mlig455_029653 {REF} {Length: 6556} {Pfam: Laminin G domain [PF02210.26, score=35.5]; Laminin G domain [PF00054.25, score=30.9]} {RNA1509_24207, RNA1509_2634, RNA1509_46382} {RNA1310_505.1, RNA1509_24207, RNA1509_46382} {RNA1509_24207, RNA1509_46382, RNA815_312}
14.	MligTC455_19418	496	10.33	Mlig455_007880	Neo: Int S/G2/M Age: logFC(26M/2M)=0.599 Region-enriched R5: 2.448/0.00004		0.95	-	-	-	0.950	-	-	Mlig455_007880 {REF} {Length: 2364} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=39.4]} {RNA1509_33646} {RNA1310_17456.1} {RNA815_21443}

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