TomoSeq data search

Data search

Results for MligTC455_33415

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33415

37

0.78

Mlig455_068450

Neo: -

Age: -

Mlig455_068450 {REF} {Length: 2144} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=36.0]} {RNA1509_12203} {RNA1310_114701} {RNA815_1471}

Cumulative graph for MligTC455_33415

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.487	0.899	0.66231	1.00000
RegionR2	-0.07	0.899	0.97682	1.00000
RegionR3	-1.331	0.899	0.99674	1.00000
RegionR4	2.167	0.899	0.26940	0.57468
RegionR5	-0.146	0.899	0.83827	1.00000
RegionR6	0.911	0.899	0.51556	1.00000
RegionR7	0.117	0.899	0.92892	1.00000
RegionR8	0.84	0.899	0.78183	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.297	0.899	1.00000	1.00000
RegenerationR2	-3.166	0.899	0.09293	0.48588
RegenerationR3	-0.69	0.899	0.65904	0.93291
RegenerationR4	-2.198	0.899	0.22219	0.67080
RegenerationR5	0.105	0.899	0.92095	1.00000
RegenerationR6	-0.235	0.899	0.75804	0.95611
RegenerationBL	0.021	0.899	0.99318	1.00000
RegenerationTP	-2.297	0.899	0.34836	0.78995

Genes with expression patterns similar to MligTC455_33415

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33415	37	0.78	Mlig455_068450	Neo: - Age: -		2	-	-	1.000	-	-	1.000	Mlig455_068450 {REF} {Length: 2144} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=36.0]} {RNA1509_12203} {RNA1310_114701} {RNA815_1471}
2.	MligTC455_33414	44	0.92	Mlig455_032359	Neo: - Age: -		1.969	-	-	0.994	-	-	0.975	Mlig455_032359 {REF} {Length: 3223} {Pfam: SAP domain [PF02037.29, score=22.6]} {RNA1509_24228} {RNA1310_15368.2} {RNA815_52391}
3.	MligTC455_27697	32642	680.04	Mlig455_012396	Neo: - Age: - Region-enriched R6: 1.280/0.00010	ACTB	0.975	-	-	-	-	-	0.975	Mlig455_012396 {REF} {Length: 1679} {Pfam: Actin [PF00022.21, score=498.8]} {Human: ENSG00000075624, ACTB, actin beta, [RH, Score=759, Expect=0.0]; ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=758, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=759, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=758, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=730, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=763, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=763, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656} {RNA1310_19151, RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656} {RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656, RNA815_4929.1}
4.	MligTC455_27698	32400	675	Mlig455_012821	Neo: - Age: Down-Up-Up Region-enriched R6: 1.266/0.00012	ACTB	0.975	-	-	-	-	-	0.975	Mlig455_012821 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=498.8]} {Human: ENSG00000075624, ACTB, actin beta, [RH, Score=759, Expect=0.0]; ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=758, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=759, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=758, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=730, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=763, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=763, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_56827, RNA1509_7656} {RNA1310_19151, RNA1509_56827} {RNA1509_56827, RNA815_4929.1}
5.	MligTC455_39841	153	3.19	Mlig455_011412, Mlig455_061157	Neo: - Age: -	WNT11, WNT4	0.974	-	-	-	-	-	0.974	Mlig455_011412 {REF} {Length: 1772} {Pfam: wnt family [PF00110.21, score=129.8]} {Human: ENSG00000085741, WNT11, Wnt family member 11, [Score=83.2, Expect=7e-17]; ENSG00000162552, WNT4, Wnt family member 4, [Score=82.0, Expect=2e-16]; ENSG00000134245, WNT2B, Wnt family member 2B, [Score=81.6, Expect=3e-16]; ENSG00000188064, WNT7B, Wnt family member 7B, [Score=79.7, Expect=9e-16]} {Mouse: ENSMUSG00000015957, Wnt11, wingless-type MMTV integration site family, member 11, [Score=87.8, Expect=1e-18]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=78.2, Expect=4e-15]} {Celegans: WBGene00000857, cwn-1, [Score=75.5, Expect=1e-14]} {Smed: dd_Smed_v6_16209_0_1, dd_Smed_v6_16209_0_1, [RH, Score=126, Expect=5e-32]} Mlig455_061157 {REF} {Length: 1724} {Pfam: wnt family [PF00110.21, score=134.3]} {Human: ENSG00000162552, WNT4, Wnt family member 4, [Score=84.0, Expect=4e-17]; ENSG00000188064, WNT7B, Wnt family member 7B, [Score=80.5, Expect=4e-16]; ENSG00000158955, WNT9B, Wnt family member 9B, [Score=80.1, Expect=8e-16]; ENSG00000002745, WNT16, Wnt family member 16, [Score=80.1, Expect=8e-16]; ENSG00000276799, WNT9B, Wnt family member 9B, [Score=80.1, Expect=8e-16]} {Mouse: ENSMUSG00000015957, Wnt11, wingless-type MMTV integration site family, member 11, [Score=85.9, Expect=6e-18]; ENSMUSG00000036856, Wnt4, wingless-type MMTV integration site family, member 4, [Score=84.3, Expect=2e-17]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=87.0, Expect=6e-18]} {Celegans: WBGene00000857, cwn-1, [Score=75.9, Expect=9e-15]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [Score=129, Expect=2e-33]}
6.	MligTC455_12103	45	0.93	Mlig455_058005, Mlig455_058199	Neo: - Age: -	PTH1R	0.973	-	-	0.973	-	-	-	Mlig455_058005 {REF} {Length: 2247} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=180.8]; Hormone receptor domain [PF02793.24, score=71.6]} {Human: ENSG00000160801, PTH1R, parathyroid hormone 1 receptor, [Score=218, Expect=5e-62]} {Mouse: ENSMUSG00000032492, Pth1r, parathyroid hormone 1 receptor, [Score=218, Expect=2e-62]} {Dmel: FBgn0033744, Dh44-R2, Diuretic hormone 44 receptor 2, [RH, Score=136, Expect=3e-34]} {Celegans: WBGene00015735, pdfr-1, Calcitonin receptor-like protein 1, [Score=108, Expect=9e-25]} {Smed: dd_Smed_v6_20871_0_1, dd_Smed_v6_20871_0_1, [Score=233, Expect=2e-69]} {RNA1310_107845} Mlig455_058199 {REF} {Length: 2151} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=133.8]; Hormone receptor domain [PF02793.24, score=72.0]} {Human: ENSG00000160801, PTH1R, parathyroid hormone 1 receptor, [Score=180, Expect=1e-48]} {Mouse: ENSMUSG00000032492, Pth1r, parathyroid hormone 1 receptor, [Score=182, Expect=2e-49]} {Dmel: FBgn0033744, Dh44-R2, Diuretic hormone 44 receptor 2, [Score=112, Expect=5e-26]} {Celegans: WBGene00015735, pdfr-1, Calcitonin receptor-like protein 1, [Score=90.1, Expect=1e-18]} {Smed: dd_Smed_v6_20871_0_1, dd_Smed_v6_20871_0_1, [Score=206, Expect=8e-60]} {RNA1310_107845}
7.	MligTC455_52516	22	0.45	Mlig455_008588	Neo: - Age: -		0.97	-	-	0.970	-	-	-	Mlig455_008588 {REF} {Length: 2179} {RNA1310_80172.1} {RNA815_41728}
8.	MligTC455_23085	70	1.46	Mlig455_009831	Neo: Int S/G2/M Age: - Regeneration-enriched R6: 6.951 Regeneration-enriched BL: 6.856 Regeneration-enriched R3: 6.339 Regeneration-enriched R5: 6.022 Regeneration-enriched R4: 6.001	ARHGAP19	0.966	-	-	-	-	-	0.966	Mlig455_009831 {REF} {Length: 4007} {Pfam: RhoGAP domain [PF00620.29, score=54.0]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=51.6, Expect=2e-06]} {RNA1310_80895} {RNA815_39927}
9.	MligTC455_40613	41	0.86	Mlig455_026807	Neo: - Age: -		0.962	-	-	0.962	-	-	-	Mlig455_026807 {REF} {Length: 1929} {RNA1509_37399} {RNA1310_18527, RNA1509_37399} {RNA1509_37399, RNA815_9560}
10.	MligTC455_26306	88	1.83	Mlig455_042029	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_042029 {REF} {Length: 1756} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=172.1]; Tetratricopeptide repeat [PF13424.8, score=21.0]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=134, Expect=2e-37]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=111, Expect=6e-29]} {RNA1509_30138} {RNA1310_37045} {RNA815_18403}
11.	MligTC455_39208	76	1.57	Mlig455_051743, Mlig455_061440	Neo: Int S/G2/M Age: - Region-enriched R5: 2.935/0.00838	UBN1	0.955	-	-	-	-	-	0.955	Mlig455_051743 {REF} {Length: 4440} {TRANSSPLICED} {Pfam: Ubinuclein conserved middle domain [PF14075.8, score=101.1]; HPC2 and ubinuclein domain [PF08729.12, score=48.3]} {Human: ENSG00000118900, UBN1, ubinuclein 1, [RH, Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000039473, Ubn1, ubinuclein 1, [RH, Score=72.8, Expect=1e-12]} {Dmel: FBgn0005596, yem, yemanuclein, [Score=68.9, Expect=1e-11]} {Smed: dd_Smed_v6_10210_0_1, dd_Smed_v6_10210_0_1, [RH, Score=63.5, Expect=3e-10]} {RNA1509_10644} {RNA1310_1714.1} {RNA815_16489} Mlig455_061440 {REF} {Length: 812} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=35.5]; PHD-finger [PF00628.31, score=19.6]}
12.	MligTC455_53656	27	0.57	Mlig455_033327	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_033327 {REF} {Length: 1116} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=43.9, Expect=6e-06]} {RNA1509_48973} {RNA1310_39833} {RNA815_36286}
13.	MligTC455_14561	13	0.27	Mlig455_034012	Neo: - Age: -	SCNN1G	0.951	-	-	-	-	-	0.951	Mlig455_034012 {REF} {Length: 2646} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=208.5]} {Human: ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=95.1, Expect=7e-20]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=92.8, Expect=3e-19]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=87.0, Expect=8e-18]} {Smed: dd_Smed_v6_19727_0_1, dd_Smed_v6_19727_0_1, [Score=119, Expect=4e-28]} {RNA1310_62957} {RNA815_39090}

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