TomoSeq data search

Data search

Results for MligTC455_27698

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27698

32400

675.00

Mlig455_012821

Neo: -

Age: Down-Up-Up

Region-enriched R6: 1.266/0.00012

ACTB

Mlig455_012821 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=498.8]} {Human: ENSG00000075624, ACTB, actin beta, [RH, Score=759, Expect=0.0]; ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=758, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=759, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=758, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=730, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=763, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=763, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_56827, RNA1509_7656} {RNA1310_19151, RNA1509_56827} {RNA1509_56827, RNA815_4929.1}

Cumulative graph for MligTC455_27698

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.506	9.448	0.15850	0.77782
RegionR2	-0.53	9.448	0.08942	0.36680
RegionR3	-0.548	9.448	0.05464	0.41034
RegionR4	-0.011	9.448	0.97184	1.00000
RegionR5	0.709	9.448	0.00561	0.03786
RegionR6	1.266	9.448	0.00000	0.00012
RegionR7	0.079	9.448	0.76645	1.00000
RegionR8	-0.461	9.448	0.12847	0.65784

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.397	9.448	0.37077	1.00000
RegenerationR2	0.056	9.448	0.87452	1.00000
RegenerationR3	0.303	9.448	0.39232	0.79744
RegenerationR4	-0.31	9.448	0.39411	0.80976
RegenerationR5	-0.79	9.448	0.02495	0.26931
RegenerationR6	-0.561	9.448	0.11001	0.40979
RegenerationBL	0.361	9.448	0.21515	0.56018
RegenerationTP	-0.276	9.448	0.39613	0.82650

Genes with expression patterns similar to MligTC455_27698

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27698	32400	675	Mlig455_012821	Neo: - Age: Down-Up-Up Region-enriched R6: 1.266/0.00012	ACTB	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012821 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=498.8]} {Human: ENSG00000075624, ACTB, actin beta, [RH, Score=759, Expect=0.0]; ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=758, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=759, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=758, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=730, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=763, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=763, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_56827, RNA1509_7656} {RNA1310_19151, RNA1509_56827} {RNA1509_56827, RNA815_4929.1}
2.	MligTC455_27697	32642	680.04	Mlig455_012396	Neo: - Age: - Region-enriched R6: 1.280/0.00010	ACTB	5.995	0.999	0.998	1.000	1.000	0.999	0.999	Mlig455_012396 {REF} {Length: 1679} {Pfam: Actin [PF00022.21, score=498.8]} {Human: ENSG00000075624, ACTB, actin beta, [RH, Score=759, Expect=0.0]; ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=758, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=759, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=758, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=737, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=737, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=736, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=735, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=730, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=763, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=763, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656} {RNA1310_19151, RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656} {RNA1509_14235, RNA1509_28734, RNA1509_53641, RNA1509_6081, RNA1509_7656, RNA815_4929.1}
3.	MligTC455_33415	37	0.78	Mlig455_068450	Neo: - Age: -		0.975	-	-	-	-	-	0.975	Mlig455_068450 {REF} {Length: 2144} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=36.0]} {RNA1509_12203} {RNA1310_114701} {RNA815_1471}
4.	MligTC455_23085	70	1.46	Mlig455_009831	Neo: Int S/G2/M Age: - Regeneration-enriched R6: 6.951 Regeneration-enriched BL: 6.856 Regeneration-enriched R3: 6.339 Regeneration-enriched R5: 6.022 Regeneration-enriched R4: 6.001	ARHGAP19	0.974	-	-	-	-	-	0.974	Mlig455_009831 {REF} {Length: 4007} {Pfam: RhoGAP domain [PF00620.29, score=54.0]} {Human: ENSG00000213390, ARHGAP19, Rho GTPase activating protein 19, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000025154, Arhgap19, Rho GTPase activating protein 19, [Score=51.6, Expect=2e-06]} {RNA1310_80895} {RNA815_39927}
5.	MligTC455_22783	56	1.17	Mlig455_006830, Mlig455_055162	Neo: - Age: Up-Up-Down	KIF13A	0.966	-	-	0.966	-	-	-	Mlig455_006830 {REF} {Length: 674} {NoTransDecoderORF} {RNA1509_45971} {RNA1310_13799} {RNA815_1117} Mlig455_055162 {REF} {Length: 777} {Pfam: Kinesin motor domain [PF00225.25, score=18.4]} {Human: ENSG00000137177, KIF13A, kinesin family member 13A, [Score=97.1, Expect=2e-24]} {Mouse: ENSMUSG00000021375, Kif13a, kinesin family member 13A, [Score=97.4, Expect=1e-24]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=93.2, Expect=2e-23]} {Celegans: WBGene00002217, klp-4, Kinesin-like protein, [Score=63.2, Expect=5e-13]} {Smed: dd_Smed_v6_7089_0_1, dd_Smed_v6_7089_0_1, [Score=86.3, Expect=3e-21]} {RNA1509_45971} {RNA1310_476.1} {RNA815_1117}
6.	MligTC455_13227	114	2.38	Mlig455_059425	Neo: - Age: - Region-enriched R5: 3.436/0.00076		0.962	-	-	0.962	-	-	-	Mlig455_059425 {REF} {Length: 2024} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.8]} {RNA1509_50589} {RNA1310_17944, RNA1509_50589} {RNA1509_50589, RNA815_7628}
7.	MligTC455_30134	29	0.61	Mlig455_045836	Neo: - Age: Up-Down-Up		0.958	-	-	0.958	-	-	-	Mlig455_045836 {REF} {Length: 1500} {NoTransDecoderORF} {RNA1509_55535} {RNA1310_52881} {RNA815_11436}
8.	MligTC455_16078	158	3.29	Mlig455_042445	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.824		0.955	-	-	-	-	-	0.955	Mlig455_042445 {REF} {Length: 2432} {RNA1509_40390} {RNA1310_26714.1} {RNA815_22393}
9.	MligTC455_39723	249	5.18	Mlig455_022693, Mlig455_022705	Neo: - Age: - Region-enriched R2: 3.177/0.00982		0.955	-	-	-	-	-	0.955	Mlig455_022693 {REF} {Length: 1190} {TRANSSPLICED} {RNA1310_27415} {RNA815_16060} Mlig455_022705 {REF} {Length: 1526} {TRANSSPLICED} {RNA1310_27415} {RNA815_16060}
10.	MligTC455_50019	248	5.17	Mlig455_050542	Neo: Int S/G2/M Age: Up-Up-Down	NSD2	0.95	-	-	-	-	-	0.950	Mlig455_050542 {REF} {Length: 4778} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=113.6]; SET domain [PF00856.30, score=80.1]; AWS domain [PF17907.3, score=47.6]; PHD-finger [PF00628.31, score=38.8]; NSD Cys-His rich domain [PF17982.3, score=32.8]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [RH, Score=691, Expect=0.0]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [RH, Score=667, Expect=0.0]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [RH, Score=696, Expect=0.0]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [RH, Score=431, Expect=1e-130]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=142, Expect=5e-34]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_8385} {RNA1310_4002, RNA1509_8385} {RNA1509_8385, RNA815_849}

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