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Results for MligTC455_23339

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_23339 286 5.96 Mlig455_004644, Mlig455_014981, Mlig455_070982

Neo: -

Age: Up-Down-Down

Mlig455_004644 {REF} {Length: 3082} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=110, Expect=2e-25]} {Dmel: FBgn0029807, CG3108, [Score=50.4, Expect=2e-06]} {RNA1509_26883} {RNA1310_785} {RNA815_4511}

Mlig455_014981 {REF} {Length: 4380} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=72.0, Expect=8e-14]} {RNA1509_26883} {RNA1310_694} {RNA815_4511}

Mlig455_070982 {REF} {Length: 2690} {RNA1509_26883} {RNA1310_785} {RNA815_4511}

Cumulative graph for MligTC455_23339

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.966 2.946 0.70477 1.00000
RegionR2 0.385 2.946 0.71620 1.00000
RegionR3 0.57 2.946 0.52545 1.00000
RegionR4 0.202 2.946 0.85510 1.00000
RegionR5 -2.545 2.946 0.01700 0.08596
RegionR6 0.119 2.946 0.88440 1.00000
RegionR7 0.271 2.946 0.78075 1.00000
RegionR8 1.964 2.946 0.06824 0.50176

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.485 2.946 0.66707 1.00000
RegenerationR2 0.866 2.946 0.35450 0.78476
RegenerationR3 0.485 2.946 0.63387 0.92200
RegenerationR4 0.636 2.946 0.54316 0.88981
RegenerationR5 2.777 2.946 0.00875 0.16902
RegenerationR6 1.363 2.946 0.17724 0.51072
RegenerationBL 1.581 2.946 0.10510 0.38277
RegenerationTP 1.54 2.946 0.13370 0.54953


Genes with expression patterns similar to MligTC455_23339

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_23339 286 5.96 Mlig455_004644, Mlig455_014981, Mlig455_070982

Neo: -

Age: Up-Down-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_004644 {REF} {Length: 3082} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=110, Expect=2e-25]} {Dmel: FBgn0029807, CG3108, [Score=50.4, Expect=2e-06]} {RNA1509_26883} {RNA1310_785} {RNA815_4511}

Mlig455_014981 {REF} {Length: 4380} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=72.0, Expect=8e-14]} {RNA1509_26883} {RNA1310_694} {RNA815_4511}

Mlig455_070982 {REF} {Length: 2690} {RNA1509_26883} {RNA1310_785} {RNA815_4511}
2. MligTC455_23338 206 4.29 Mlig455_033045, Mlig455_053128

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.721

 NEFH 4.645 0.960 0.940 - 0.855 0.899 0.991

Mlig455_033045 {REF} {Length: 9317} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=111, Expect=1e-24]} {Dmel: FBgn0029807, CG3108, [Score=53.1, Expect=8e-07]} {RNA1509_6333} {RNA1310_785} {RNA815_2080}

Mlig455_053128 {REF} {Length: 16958} {Human: ENSG00000100285, NEFH, neurofilament heavy, [Score=51.6, Expect=5e-06]} {Mouse: ENSMUSG00000020396, Nefh, neurofilament, heavy polypeptide, [Score=114, Expect=1e-25]} {Dmel: FBgn0029807, CG3108, [Score=52.4, Expect=1e-06]} {RNA1509_28919, RNA1509_6333} {RNA1310_785, RNA1509_28919} {RNA1509_28919, RNA815_2080}
3. MligTC455_27590 776 16.16 Mlig455_052400, Mlig455_069548

Neo: -

Age: logFC(26M/2M)=0.503

 1.758 - - 0.801 - - 0.957

Mlig455_052400 {REF} {Length: 574} {RNA1509_47491} {RNA1310_60811} {RNA815_1602}

Mlig455_069548 {REF} {Length: 877} {Pfam: Protein of unknown function (DUF445) [PF04286.14, score=23.1]} {RNA1509_47491} {RNA1310_60811} {RNA815_1602}
4. MligTC455_37549 88 1.83 Mlig455_048739

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.657

 1.694 - - - 0.957 - 0.737 Mlig455_048739 {REF} {Length: 1455} {TRANSSPLICED} {RNA1509_32517} {RNA1310_30798.1, RNA1509_32517} {RNA1509_32517, RNA815_17198}
5. MligTC455_57011 12 0.25 Mlig455_027347

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_027347 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_20376} {RNA1310_41666} {RNA815_41194.1}
6. MligTC455_30224 418 8.7 Mlig455_045910, Mlig455_046402, Mlig455_049019

Neo: Irradiation

Age: Down-Down-Down

 PIF1 0.957 - - 0.957 - - -

Mlig455_045910 {REF} {Length: 11950} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.9]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=3e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=705, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=3e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}

Mlig455_046402 {REF} {Length: 7812} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=2e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=736, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=2e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}

Mlig455_049019 {REF} {Length: 5908} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=335.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.7]; AAA domain [PF13604.8, score=46.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.3]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=121, Expect=7e-28]} {Celegans: WBGene00022692, ZK250.9, [Score=734, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=117, Expect=1e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1}
7. MligTC455_30229 85 1.77 Mlig455_050775

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_050775 {REF} {Length: 6509} {TRANSSPLICED} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=176.6]} {Celegans: WBGene00021577, Y46B2A.2, [Score=445, Expect=3e-138]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=68.9, Expect=1e-13]} {RNA1509_5036} {RNA1310_4048.1} {RNA815_356.1}
8. MligTC455_36493 43 0.89 Mlig455_070548

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_070548 {REF} {Length: 483} {NoTransDecoderORF} {RNA1509_34671} {RNA1310_65929} {RNA815_64882}
9. MligTC455_39166 204 4.25 Mlig455_053622

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_053622 {REF} {Length: 236} {NoTransDecoderORF} {RNA1509_49771} {RNA1310_129153} {RNA815_30495}
10. MligTC455_52180 49 1.02 Mlig455_026542

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_026542 {REF} {Length: 1858} {NoTransDecoderORF} {RNA1509_47901} {RNA1310_42492.2} {RNA815_28442}
11. MligTC455_23070 1606 33.46 Mlig455_034639, Mlig455_062635

Neo: -

Age: -

Region-enriched R7: 1.351/0.00031

 EFHD1 0.952 - - - - - 0.952

Mlig455_034639 {REF} {Length: 3054} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=29.9]; EF hand [PF00036.34, score=28.2]; EF-hand domain [PF13405.8, score=27.8]; EF hand [PF13202.8, score=18.5]} {Human: ENSG00000115468, EFHD1, EF-hand domain family member D1, [Score=114, Expect=2e-30]; ENSG00000142634, EFHD2, EF-hand domain family member D2, [Score=111, Expect=2e-29]} {Mouse: ENSMUSG00000040659, Efhd2, EF hand domain containing 2, [Score=112, Expect=5e-30]; ENSMUSG00000026255, Efhd1, EF hand domain containing 1, [Score=112, Expect=6e-30]} {Dmel: FBgn0032731, Swip-1, Swiprosin-1, [Score=110, Expect=3e-29]} {Celegans: WBGene00012980, efhd-1, EF HanD calcium binding protein, [Score=87.4, Expect=6e-21]} {Smed: dd_Smed_v6_1467_0_1, dd_Smed_v6_1467_0_1, [Score=132, Expect=4e-38]} {RNA1509_32250} {RNA1310_17151} {RNA815_2891}

Mlig455_062635 {REF} {Length: 3055} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=29.9]; EF hand [PF00036.34, score=28.2]; EF-hand domain [PF13405.8, score=27.8]; EF hand [PF13202.8, score=18.5]} {Human: ENSG00000115468, EFHD1, EF-hand domain family member D1, [Score=114, Expect=2e-30]; ENSG00000142634, EFHD2, EF-hand domain family member D2, [Score=111, Expect=2e-29]} {Mouse: ENSMUSG00000040659, Efhd2, EF hand domain containing 2, [Score=112, Expect=5e-30]; ENSMUSG00000026255, Efhd1, EF hand domain containing 1, [Score=112, Expect=6e-30]} {Dmel: FBgn0032731, Swip-1, Swiprosin-1, [Score=110, Expect=3e-29]} {Celegans: WBGene00012980, efhd-1, EF HanD calcium binding protein, [Score=87.4, Expect=6e-21]} {Smed: dd_Smed_v6_1467_0_1, dd_Smed_v6_1467_0_1, [Score=132, Expect=4e-38]} {RNA1509_17138, RNA1509_23230, RNA1509_32250, RNA1509_40469, RNA1509_51568, RNA1509_52570, RNA1509_59315} {RNA1310_17151, RNA1509_17138, RNA1509_23230, RNA1509_32250, RNA1509_40469, RNA1509_51568, RNA1509_52570, RNA1509_59315} {RNA1509_17138, RNA1509_23230, RNA1509_32250, RNA1509_40469, RNA1509_51568, RNA1509_52570, RNA1509_59315, RNA815_2891}

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