Data search
Results for MligTC455_23670
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23670 | 661 | 13.78 | Mlig455_003202 | Neo: Irradiation Age: - |
XRN2 | Mlig455_003202 {REF} {Length: 3715} {TRANSSPLICED} {Pfam: Xrn1 helical domain [PF17846.3, score=514.1]; XRN 5'-3' exonuclease N-terminus [PF03159.20, score=336.1]} {Human: ENSG00000088930, XRN2, 5'-3' exoribonuclease 2, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000027433, Xrn2, 5'-3' exoribonuclease 2, [RH, Score=946, Expect=0.0]} {Dmel: FBgn0031868, Rat1, Rat1 5'-3' exoribonuclease, [RH, Score=884, Expect=0.0]} {Celegans: WBGene00006964, xrn-2, 5'-3' exoribonuclease 2 homolog, [RH, Score=902, Expect=0.0]} {Smed: dd_Smed_v6_3463_0_1, dd_Smed_v6_3463_0_1, [RH, Score=964, Expect=0.0]} {RNA1509_1472, RNA1509_22392} {RNA1310_2139.1, RNA1509_22392} {RNA1509_22392, RNA815_2958} |
Cumulative graph for MligTC455_23670
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.091 | 4.187 | 0.93366 | 1.00000 | |
| RegionR2 | 1.04 | 4.187 | 0.06340 | 0.30446 | |
| RegionR3 | 0.224 | 4.187 | 0.60648 | 1.00000 | |
| RegionR4 | 1.114 | 4.187 | 0.02593 | 0.12251 | |
| RegionR5 | 0.727 | 4.187 | 0.05441 | 0.19896 | |
| RegionR6 | -0.148 | 4.187 | 0.75474 | 1.00000 | |
| RegionR7 | -1.139 | 4.187 | 0.09861 | 0.60068 | |
| RegionR8 | -1.726 | 4.187 | 0.06445 | 0.49203 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.248 | 4.187 | 0.89124 | 1.00000 | |
| RegenerationR2 | 0.158 | 4.187 | 0.73825 | 0.96914 | |
| RegenerationR3 | 0.957 | 4.187 | 0.06513 | 0.42970 | |
| RegenerationR4 | -0.23 | 4.187 | 0.66092 | 0.93844 | |
| RegenerationR5 | 0.461 | 4.187 | 0.31029 | 0.73620 | |
| RegenerationR6 | 1.159 | 4.187 | 0.02805 | 0.20930 | |
| RegenerationBL | 2.266 | 4.187 | 0.00044 | 0.01292 | |
| RegenerationTP | 2.151 | 4.187 | 0.00476 | 0.11463 |
Genes with expression patterns similar to MligTC455_23670
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23670 | 661 | 13.78 | Mlig455_003202 | Neo: Irradiation Age: - |
XRN2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003202 {REF} {Length: 3715} {TRANSSPLICED} {Pfam: Xrn1 helical domain [PF17846.3, score=514.1]; XRN 5'-3' exonuclease N-terminus [PF03159.20, score=336.1]} {Human: ENSG00000088930, XRN2, 5'-3' exoribonuclease 2, [RH, Score=951, Expect=0.0]} {Mouse: ENSMUSG00000027433, Xrn2, 5'-3' exoribonuclease 2, [RH, Score=946, Expect=0.0]} {Dmel: FBgn0031868, Rat1, Rat1 5'-3' exoribonuclease, [RH, Score=884, Expect=0.0]} {Celegans: WBGene00006964, xrn-2, 5'-3' exoribonuclease 2 homolog, [RH, Score=902, Expect=0.0]} {Smed: dd_Smed_v6_3463_0_1, dd_Smed_v6_3463_0_1, [RH, Score=964, Expect=0.0]} {RNA1509_1472, RNA1509_22392} {RNA1310_2139.1, RNA1509_22392} {RNA1509_22392, RNA815_2958} |
| 2. | MligTC455_44351 | 1127 | 23.48 | Mlig455_021822 | Neo: Int S/G2/M Age: - |
KCMF1 | 2.416 | - | - | - | 0.741 | 0.721 | 0.954 | Mlig455_021822 {REF} {Length: 2363} {TRANSSPLICED} {Pfam: Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=48.2]; Zinc finger, ZZ type [PF00569.19, score=41.5]} {Human: ENSG00000176407, KCMF1, potassium channel modulatory factor 1, [RH, Score=172, Expect=6e-49]} {Mouse: ENSMUSG00000055239, Kcmf1, potassium channel modulatory factor 1, [RH, Score=172, Expect=6e-49]} {Dmel: FBgn0037655, Kcmf1, Potassium channel modulatory factor 1, [RH, Score=160, Expect=6e-43]} {Celegans: WBGene00022785, ZK652.6, [RH, Score=110, Expect=8e-26]} {Smed: dd_Smed_v6_9359_0_1, dd_Smed_v6_9359_0_1, [RH, Score=139, Expect=4e-36]} {RNA1509_8498} {RNA1310_776, RNA1509_8498} {RNA1509_8498, RNA815_10082} |
| 3. | MligTC455_53876 | 497 | 10.36 | Mlig455_029017 | Neo: Int S/G2/M Age: - Region-enriched R4: 2.406/0.00104 |
DTYMK | 1.722 | 0.768 | - | - | 0.954 | - | - | Mlig455_029017 {REF} {Length: 1458} {TRANSSPLICED} {Pfam: Thymidylate kinase [PF02223.19, score=136.6]; Polyphosphate kinase 2 (PPK2) [PF03976.16, score=19.7]} {Human: ENSG00000168393, DTYMK, deoxythymidylate kinase, [RH, Score=193, Expect=1e-61]} {Mouse: ENSMUSG00000026281, Dtymk, deoxythymidylate kinase, [RH, Score=184, Expect=3e-58]} {Dmel: FBgn0034299, CG5757, [RH, Score=158, Expect=3e-48]} {Celegans: WBGene00011272, dtmk-1, Thymidylate kinase, [RH, Score=177, Expect=5e-56]} {Smed: dd_Smed_v6_3849_0_2, dd_Smed_v6_3849_0_2, [RH, Score=162, Expect=3e-50]} {RNA1509_24600} {RNA1310_40248, RNA1509_24600} {RNA1509_24600, RNA815_19284} |
| 4. | MligTC455_04366 | 654 | 13.63 | Mlig455_052829 | Neo: - Age: - |
UPF2 | 1.669 | - | - | - | 0.709 | 0.960 | - | Mlig455_052829 {REF} {Length: 4197} {TRANSSPLICED} {Pfam: MIF4G domain [PF02854.21, score=172.7]; Up-frameshift suppressor 2 [PF04050.16, score=29.1]} {Human: ENSG00000151461, UPF2, UPF2, regulator of nonsense mediated mRNA decay, [Score=651, Expect=0.0]} {Mouse: ENSMUSG00000043241, Upf2, UPF2 regulator of nonsense transcripts homolog (yeast), [Score=659, Expect=0.0]} {Dmel: FBgn0029992, Upf2, [Score=569, Expect=0.0]} {Celegans: WBGene00004881, smg-3, SMG-3; Suppressor with Morphological effect on Genitalia, [RH, Score=328, Expect=5e-94]} {Smed: dd_Smed_v6_7696_0_1, dd_Smed_v6_7696_0_1, [RH, Score=541, Expect=3e-172]} {RNA1509_10414} {RNA1310_2087} {RNA815_4700.1} |
| 5. | MligTC455_22100 | 400 | 8.34 | Mlig455_041706, Mlig455_042259 | Neo: - Age: logFC(26M/2M)=0.258 Region-enriched R6: 2.129/0.03684 |
ECE2 | 0.967 | - | - | - | - | 0.967 | - | Mlig455_041706 {REF} {Length: 2895} {Pfam: Peptidase family M13 [PF01431.23, score=57.4]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=72.4, Expect=2e-12]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=71.6, Expect=3e-12]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=69.7, Expect=9e-12]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=69.7, Expect=9e-12]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=62.4, Expect=1e-09]} {Celegans: WBGene00014171, nep-26, NEPrilysin metallopeptidase family, [Score=50.1, Expect=5e-06]} {RNA1509_20201} {RNA1310_6902} {RNA815_3882} Mlig455_042259 {REF} {Length: 2807} {Pfam: Peptidase family M13 [PF01431.23, score=57.4]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=76.3, Expect=1e-13]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=75.5, Expect=2e-13]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=73.6, Expect=6e-13]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=73.6, Expect=5e-13]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=63.2, Expect=7e-10]} {Celegans: WBGene00014171, nep-26, NEPrilysin metallopeptidase family, [Score=51.6, Expect=2e-06]} {RNA1509_20201} {RNA1310_6902, RNA1509_20201} {RNA1509_20201, RNA815_3882} |
| 6. | MligTC455_23298 | 1702 | 35.47 | Mlig455_053704 | Neo: Germline Age: - |
ERGIC1 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_053704 {REF} {Length: 2337} {Pfam: Endoplasmic reticulum vesicle transporter [PF07970.14, score=108.9]; Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) [PF13850.8, score=100.4]} {Human: ENSG00000113719, ERGIC1, endoplasmic reticulum-golgi intermediate compartment 1, [RH, Score=318, Expect=1e-108]} {Mouse: ENSMUSG00000001576, Ergic1, endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1, [RH, Score=316, Expect=3e-108]} {Dmel: FBgn0036489, CG7011, [Score=99.0, Expect=2e-23]} {Celegans: WBGene00022416, Y102A11A.6, [RH, Score=291, Expect=7e-99]} {Smed: dd_Smed_v6_8239_0_1, dd_Smed_v6_8239_0_1, [Score=95.1, Expect=3e-22]} {RNA1509_4970} {RNA1310_3367.1, RNA1509_4970} {RNA1509_4970, RNA815_1695} |
| 7. | MligTC455_29521 | 442 | 9.22 | Mlig455_049335 | Neo: - Age: - |
PRKAB2 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_049335 {REF} {Length: 3983} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=111.2]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=89.0]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=21.0]; Carbohydrate-binding module 48 (Isoamylase N-terminal domain) [PF02922.20, score=20.1]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=238, Expect=1e-77]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=233, Expect=1e-75]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=237, Expect=1e-77]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=234, Expect=4e-76]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=202, Expect=4e-63]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [RH, Score=218, Expect=2e-70]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=225, Expect=3e-72]} {RNA1509_18723, RNA1509_50031, RNA1509_50454, RNA1509_52608} {RNA1310_30146, RNA1509_18723, RNA1509_50031, RNA1509_50454, RNA1509_52608} {RNA1509_18723, RNA1509_50031, RNA1509_50454, RNA1509_52608, RNA815_15840} |
| 8. | MligTC455_41845 | 1092 | 22.76 | Mlig455_009050, Mlig455_058131 | Neo: - Age: - Regeneration-upregulated BL: 1.333 Regeneration-enriched BL: 1.333 |
WDR70 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_009050 {REF} {Length: 2801} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=55.8]} {Human: ENSG00000082068, WDR70, WD repeat domain 70, [RH, Score=359, Expect=1e-113]} {Mouse: ENSMUSG00000039828, Wdr70, WD repeat domain 70, [RH, Score=366, Expect=2e-116]} {Dmel: FBgn0034908, CG5543, [RH, Score=313, Expect=2e-96]} {Celegans: WBGene00001513, gad-1, Gastrulation defective protein 1, [RH, Score=282, Expect=3e-85]} {Smed: dd_Smed_v6_5151_0_1, dd_Smed_v6_5151_0_1, [RH, Score=286, Expect=6e-88]} {RNA1509_27989} {RNA1310_6486, RNA1509_27989} {RNA1509_27989, RNA815_4136} Mlig455_058131 {REF} {Length: 3567} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.0]} {Human: ENSG00000082068, WDR70, WD repeat domain 70, [Score=261, Expect=4e-75]} {Mouse: ENSMUSG00000039828, Wdr70, WD repeat domain 70, [Score=267, Expect=2e-77]} {Dmel: FBgn0034908, CG5543, [Score=233, Expect=2e-65]} {Celegans: WBGene00001513, gad-1, Gastrulation defective protein 1, [Score=202, Expect=7e-55]} {Smed: dd_Smed_v6_5151_0_1, dd_Smed_v6_5151_0_1, [Score=215, Expect=2e-60]} {RNA1509_18271} {RNA1310_9027} {RNA815_4136} |
| 9. | MligTC455_29402 | 182 | 3.79 | Mlig455_063253 | Neo: - |
PSD3 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_063253 {REF} {Length: 5600} {Pfam: Sec7 domain [PF01369.22, score=124.2]; Pleckstrin homology domain [PF15410.8, score=93.2]; PH domain [PF00169.31, score=40.2]} {Human: ENSG00000156011, PSD3, pleckstrin and Sec7 domain containing 3, [RH, Score=266, Expect=4e-77]} {Mouse: ENSMUSG00000030465, Psd3, pleckstrin and Sec7 domain containing 3, [RH, Score=263, Expect=4e-80]} {Dmel: FBgn0051158, Efa6, Exchange factor for Arf 6, [RH, Score=326, Expect=6e-97]} {Celegans: WBGene00013223, efa-6, Exchange factor for Arf-6, [Score=234, Expect=3e-68]} {Smed: dd_Smed_v6_9018_0_1, dd_Smed_v6_9018_0_1, [RH, Score=231, Expect=4e-65]} {RNA1509_37014, RNA1509_42489} {RNA1310_9417, RNA1509_37014, RNA1509_42489} {RNA1509_37014, RNA1509_42489, RNA815_7053} |
| 10. | MligTC455_29520 | 443 | 9.23 | Mlig455_049325 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_049325 {REF} {Length: 835} {NoTransDecoderORF} {RNA1509_50454} {RNA1310_46564} {RNA815_35755} | |
| 11. | MligTC455_42864 | 708 | 14.76 | Mlig455_015796, Mlig455_045760 | Neo: - Age: logFC(26M/2M)=-0.253 |
MINDY4 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_015796 {REF} {Length: 5062} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=179.9]} {Human: ENSG00000106125, MINDY4, MINDY lysine 48 deubiquitinase 4, [Score=113, Expect=1e-24]} {Mouse: ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [Score=127, Expect=3e-29]} {Dmel: FBgn0036143, CG14142, [Score=86.3, Expect=5e-17]} {Smed: dd_Smed_v6_13105_0_1, dd_Smed_v6_13105_0_1, [RH, Score=99.0, Expect=8e-21]} {RNA1509_19414} {RNA1310_5390.2, RNA1509_19414} {RNA1509_19414, RNA815_2292} Mlig455_045760 {REF} {Length: 5069} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=177.8]} {Human: ENSG00000106125, MINDY4, MINDY lysine 48 deubiquitinase 4, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [Score=126, Expect=6e-29]} {Dmel: FBgn0036143, CG14142, [Score=85.5, Expect=8e-17]} {Smed: dd_Smed_v6_13105_0_1, dd_Smed_v6_13105_0_1, [RH, Score=98.2, Expect=1e-20]} {RNA1509_19414} {RNA1310_5390.2} {RNA815_2292} |
| 12. | MligTC455_44475 | 2592 | 54 | Mlig455_006353, Mlig455_006402 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.652 Regeneration-enriched BL: 1.652 |
PLRG1 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_006353 {REF} {Length: 1600} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=150.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=34.0]; Nup133 N terminal like [PF08801.13, score=20.1]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.6]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=573, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=584, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=569, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=523, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=464, Expect=7e-162]} {RNA1509_33802, RNA1509_8487} {RNA1310_19706, RNA1509_33802, RNA1509_8487} {RNA1509_33802, RNA1509_8487, RNA815_8176} Mlig455_006402 {REF} {Length: 1604} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=151.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.0]; Nup133 N terminal like [PF08801.13, score=20.9]; Ciliary BBSome complex subunit 2, middle region [PF14783.8, score=19.4]} {Human: ENSG00000171566, PLRG1, pleiotropic regulator 1, [RH, Score=576, Expect=0.0]} {Mouse: ENSMUSG00000027998, Plrg1, pleiotropic regulator 1, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0030365, Tango4, Transport and Golgi organization 4, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00006481, plrg-1, PLeiotropic ReGulator (Vertebrate) homolog, [RH, Score=525, Expect=0.0]} {Smed: dd_Smed_v6_6000_0_1, dd_Smed_v6_6000_0_1, [RH, Score=468, Expect=3e-163]} {RNA1509_33802} {RNA1310_19706} {RNA815_8176} |