Data search
Results for MligTC455_23858
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23858 | 194 | 4.04 | Mlig455_023061 | Neo: - Age: - |
TADA2B | Mlig455_023061 {REF} {Length: 3588} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=21.1]} {Human: ENSG00000173011, TADA2B, transcriptional adaptor 2B, [Score=134, Expect=9e-34]} {Mouse: ENSMUSG00000029196, Tada2b, transcriptional adaptor 2B, [Score=133, Expect=2e-33]} {Dmel: FBgn0037555, Ada2b, transcriptional Adaptor 2b, [Score=109, Expect=6e-25]} {Smed: dd_Smed_v6_7427_0_1, dd_Smed_v6_7427_0_1, [Score=128, Expect=5e-32]} {RNA1509_56799} {RNA1310_15578.1, RNA1509_56799} {RNA1509_56799, RNA815_34032} |
Cumulative graph for MligTC455_23858
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.625 | 2.611 | 0.75442 | 1.00000 | |
| RegionR2 | -0.694 | 2.611 | 0.36995 | 0.76461 | |
| RegionR3 | 0.262 | 2.611 | 0.65725 | 1.00000 | |
| RegionR4 | 0.396 | 2.611 | 0.61582 | 0.92637 | |
| RegionR5 | 1.182 | 2.611 | 0.02396 | 0.11027 | |
| RegionR6 | -0.15 | 2.611 | 0.82230 | 1.00000 | |
| RegionR7 | -0.786 | 2.611 | 0.41223 | 1.00000 | |
| RegionR8 | 0.415 | 2.611 | 0.68164 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.138 | 2.611 | 0.39352 | 1.00000 | |
| RegenerationR2 | -0.238 | 2.611 | 0.67388 | 0.94657 | |
| RegenerationR3 | -0.939 | 2.611 | 0.14900 | 0.57803 | |
| RegenerationR4 | 0.18 | 2.611 | 0.79806 | 0.98561 | |
| RegenerationR5 | -0.367 | 2.611 | 0.49745 | 0.85720 | |
| RegenerationR6 | 0.176 | 2.611 | 0.79510 | 0.97469 | |
| RegenerationBL | 0.258 | 2.611 | 0.74286 | 1.00000 | |
| RegenerationTP | -0.711 | 2.611 | 0.47881 | 0.88737 |
Genes with expression patterns similar to MligTC455_23858
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23858 | 194 | 4.04 | Mlig455_023061 | Neo: - Age: - |
TADA2B | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_023061 {REF} {Length: 3588} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=21.1]} {Human: ENSG00000173011, TADA2B, transcriptional adaptor 2B, [Score=134, Expect=9e-34]} {Mouse: ENSMUSG00000029196, Tada2b, transcriptional adaptor 2B, [Score=133, Expect=2e-33]} {Dmel: FBgn0037555, Ada2b, transcriptional Adaptor 2b, [Score=109, Expect=6e-25]} {Smed: dd_Smed_v6_7427_0_1, dd_Smed_v6_7427_0_1, [Score=128, Expect=5e-32]} {RNA1509_56799} {RNA1310_15578.1, RNA1509_56799} {RNA1509_56799, RNA815_34032} |
| 2. | MligTC455_23090 | 110 | 2.28 | Mlig455_010355 | Neo: - Age: - |
1.828 | - | - | - | 0.865 | - | 0.963 | Mlig455_010355 {REF} {Length: 2269} {RNA1509_44577} {RNA1310_44961.1} {RNA815_37684} | |
| 3. | MligTC455_16495 | 418 | 8.7 | Mlig455_056081 | Neo: Irradiation Age: - |
HNRNPL | 1.722 | - | - | - | 0.769 | 0.953 | - | Mlig455_056081 {REF} {Length: 3143} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=104.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=89.8]; Occluded RNA-recognition motif [PF16842.7, score=31.7]; RRM-like domain [PF11835.10, score=21.8]} {Human: ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=174, Expect=3e-47]; ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=174, Expect=3e-47]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=174, Expect=3e-47]} {Dmel: FBgn0003435, sm, smooth, [Score=148, Expect=2e-38]} {Celegans: WBGene00016624, C44B7.2, [Score=100, Expect=3e-22]} {Smed: dd_Smed_v6_1327_0_1, dd_Smed_v6_1327_0_1, [Score=188, Expect=7e-53]} {RNA1509_11480, RNA1509_51231} {RNA1310_13979, RNA1509_11480, RNA1509_51231} {RNA1509_11480, RNA1509_51231, RNA815_16343} |
| 4. | MligTC455_17511 | 1024 | 21.32 | Mlig455_062151 | Neo: - Age: - Region-enriched R4: 1.229/0.01925 |
ASAP1 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_062151 {REF} {Length: 5061} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=114.6]; BAR domain of APPL family [PF16746.7, score=58.4]; PH domain [PF00169.31, score=41.6]} {Human: ENSG00000153317, ASAP1, ArfGAP with SH3 domain, ankyrin repeat and PH domain 1, [Score=413, Expect=8e-127]} {Mouse: ENSMUSG00000022377, Asap1, ArfGAP with SH3 domain, ankyrin repeat and PH domain1, [RH, Score=415, Expect=1e-127]} {Dmel: FBgn0050372, Asap, ArfGAP with SH3 domain, ankyrin repeat and PH domain, [Score=387, Expect=1e-117]} {Celegans: WBGene00000565, cnt-1, Arf-GAP with ANK repeat and PH domain-containing protein cnt-1 Truncated ctn-1, [Score=126, Expect=5e-30]} {Smed: dd_Smed_v6_6590_0_1, dd_Smed_v6_6590_0_1, [Score=468, Expect=6e-148]} {RNA1509_30937, RNA1509_31643, RNA1509_47188, RNA1509_48323, RNA1509_9697} {RNA1310_3374.1, RNA1509_30937, RNA1509_31643, RNA1509_47188, RNA1509_48323, RNA1509_9697} {RNA1509_30937, RNA1509_31643, RNA1509_47188, RNA1509_48323, RNA1509_9697, RNA815_556} |
| 5. | MligTC455_23854 | 1346 | 28.04 | Mlig455_047009, Mlig455_047049 | Neo: Neoblast, stringent Age: - Regeneration-upregulated BL: 2.711 Regeneration-enriched BL: 2.711 |
SMARCA1, SMARCA5 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_047009 {REF} {Length: 4747} {Pfam: SNF2-related domain [PF00176.25, score=175.5]; SLIDE [PF09111.12, score=142.3]; HAND [PF09110.13, score=92.2]; Helicase conserved C-terminal domain [PF00271.33, score=78.5]; Myb-like DNA-binding domain [PF00249.33, score=32.0]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.7]} {Human: ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1078, Expect=0.0]; ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1074, Expect=0.0]} {Mouse: ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [Score=1088, Expect=0.0]; ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [Score=1078, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [Score=1056, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [Score=985, Expect=0.0]} {Smed: dd_Smed_v6_3473_0_1, dd_Smed_v6_3473_0_1, [Score=1015, Expect=0.0]} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1310_4518.1, RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597} {RNA1509_18916, RNA1509_2044, RNA1509_23012, RNA1509_26227, RNA1509_49597, RNA815_683.1} Mlig455_047049 {REF} {Length: 3986} {Pfam: SNF2-related domain [PF00176.25, score=279.7]; SLIDE [PF09111.12, score=124.2]; HAND [PF09110.13, score=91.8]; Helicase conserved C-terminal domain [PF00271.33, score=77.7]; Type III restriction enzyme, res subunit [PF04851.17, score=42.5]; DEAD/DEAH box helicase [PF00270.31, score=28.9]; Myb-like DNA-binding domain [PF00249.33, score=24.3]; DNA-binding domain [PF13892.8, score=22.1]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=19.1]} {Human: ENSG00000153147, SMARCA5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1291, Expect=0.0]; ENSG00000102038, SMARCA1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1268, Expect=0.0]} {Mouse: ENSMUSG00000031715, Smarca5, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, [RH, Score=1292, Expect=0.0]; ENSMUSG00000031099, Smarca1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, [RH, Score=1274, Expect=0.0]} {Dmel: FBgn0011604, Iswi, Imitation SWI, [RH, Score=1256, Expect=0.0]} {Celegans: WBGene00002169, isw-1, Chromatin-remodeling complex ATPase chain isw-1, [RH, Score=1149, Expect=0.0]} {Smed: dd_Smed_v6_3355_0_1, dd_Smed_v6_3355_0_1, [RH, Score=1175, Expect=0.0]} {RNA1509_2044} {RNA1310_4518.1} {RNA815_683.1} |
| 6. | MligTC455_33607 | 482 | 10.03 | Mlig455_064683 | Neo: Int S/G2/M Age: - |
KDM1A | 0.95 | - | - | - | - | - | 0.950 | Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019} |
| 7. | MligTC455_48728 | 821 | 17.11 | Mlig455_009571 | Neo: - Age: - |
HIBADH | 0.95 | - | - | - | - | - | 0.950 | Mlig455_009571 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=150.4]; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase [PF14833.8, score=124.8]; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=26.8]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=26.5]; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=23.3]; Ornithine cyclodeaminase/mu-crystallin family [PF02423.17, score=18.9]; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.16, score=18.3]} {Human: ENSG00000106049, HIBADH, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=7e-99]} {Mouse: ENSMUSG00000029776, Hibadh, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=3e-99]} {Dmel: FBgn0034390, CG15093, [RH, Score=269, Expect=1e-88]} {Celegans: WBGene00007122, B0250.5, Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial, [RH, Score=238, Expect=6e-77]} {Smed: dd_Smed_v6_4710_0_1, dd_Smed_v6_4710_0_1, [RH, Score=305, Expect=5e-103]} {RNA1509_24430} {RNA1310_28382} {RNA815_13051} |
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