TomoSeq data search

Data search

Results for MligTC455_48728

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48728

821

17.11

Mlig455_009571

Neo: -

Age: -

HIBADH

Mlig455_009571 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=150.4]; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase [PF14833.8, score=124.8]; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=26.8]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=26.5]; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=23.3]; Ornithine cyclodeaminase/mu-crystallin family [PF02423.17, score=18.9]; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.16, score=18.3]} {Human: ENSG00000106049, HIBADH, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=7e-99]} {Mouse: ENSMUSG00000029776, Hibadh, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=3e-99]} {Dmel: FBgn0034390, CG15093, [RH, Score=269, Expect=1e-88]} {Celegans: WBGene00007122, B0250.5, Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial, [RH, Score=238, Expect=6e-77]} {Smed: dd_Smed_v6_4710_0_1, dd_Smed_v6_4710_0_1, [RH, Score=305, Expect=5e-103]} {RNA1509_24430} {RNA1310_28382} {RNA815_13051}

Cumulative graph for MligTC455_48728

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.429	4.371	0.12613	0.72112
RegionR2	0.248	4.371	0.56599	0.92707
RegionR3	0.569	4.371	0.09755	0.54826
RegionR4	-0.146	4.371	0.70999	0.99557
RegionR5	0.837	4.371	0.00664	0.04292
RegionR6	0.894	4.371	0.00828	0.14982
RegionR7	-0.29	4.371	0.51711	1.00000
RegionR8	-0.683	4.371	0.21602	0.82055

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.094	4.371	0.07421	0.76135
RegenerationR2	0.459	4.371	0.19118	0.63493
RegenerationR3	0.033	4.371	0.93003	1.00000
RegenerationR4	0.644	4.371	0.10935	0.50834
RegenerationR5	0.308	4.371	0.37765	0.78550
RegenerationR6	-0.923	4.371	0.02402	0.19283
RegenerationBL	-0.286	4.371	0.56678	0.92126
RegenerationTP	0.103	4.371	0.84832	1.00000

Genes with expression patterns similar to MligTC455_48728

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48728	821	17.11	Mlig455_009571	Neo: - Age: -	HIBADH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009571 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=150.4]; NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase [PF14833.8, score=124.8]; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=26.8]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=26.5]; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=23.3]; Ornithine cyclodeaminase/mu-crystallin family [PF02423.17, score=18.9]; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain [PF03721.16, score=18.3]} {Human: ENSG00000106049, HIBADH, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=7e-99]} {Mouse: ENSMUSG00000029776, Hibadh, 3-hydroxyisobutyrate dehydrogenase, [RH, Score=296, Expect=3e-99]} {Dmel: FBgn0034390, CG15093, [RH, Score=269, Expect=1e-88]} {Celegans: WBGene00007122, B0250.5, Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial, [RH, Score=238, Expect=6e-77]} {Smed: dd_Smed_v6_4710_0_1, dd_Smed_v6_4710_0_1, [RH, Score=305, Expect=5e-103]} {RNA1509_24430} {RNA1310_28382} {RNA815_13051}
2.	MligTC455_22044	745	15.52	Mlig455_026320	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.414 Region-enriched R4: 1.232/0.02570	ARL2BP	1.758	-	-	-	0.795	-	0.963	Mlig455_026320 {REF} {Length: 2260} {Pfam: The ARF-like 2 binding protein BART [PF11527.10, score=93.7]} {Human: ENSG00000102931, ARL2BP, ADP ribosylation factor like GTPase 2 binding protein, [RH, Score=118, Expect=2e-33]} {Mouse: ENSMUSG00000031776, Arl2bp, ADP-ribosylation factor-like 2 binding protein, [RH, Score=119, Expect=7e-34]} {Smed: dd_Smed_v6_6975_0_1, dd_Smed_v6_6975_0_1, [RH, Score=147, Expect=1e-44]} {RNA1509_8574} {RNA1310_26001, RNA1509_8574} {RNA1509_8574, RNA815_10256.1}
3.	MligTC455_33607	482	10.03	Mlig455_064683	Neo: Int S/G2/M Age: -	KDM1A	1.75	-	-	0.794	-	-	0.956	Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019}
4.	MligTC455_33927	430	8.95	Mlig455_067789	Neo: - Age: logFC(26M/2M)=0.724	PPIL2	0.961	-	-	-	-	0.961	-	Mlig455_067789 {REF} {Length: 1804} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=170.4]; Rtf2 RING-finger [PF04641.14, score=24.8]} {Human: ENSG00000100023, PPIL2, peptidylprolyl isomerase like 2, [RH, Score=502, Expect=7e-174]} {Mouse: ENSMUSG00000022771, Ppil2, peptidylprolyl isomerase (cyclophilin)-like 2, [RH, Score=493, Expect=3e-170]} {Dmel: FBgn0034109, CG7747, [RH, Score=513, Expect=1e-178]} {Celegans: WBGene00000880, cyn-4, Peptidyl-prolyl cis-trans isomerase 4, [RH, Score=440, Expect=6e-150]} {Smed: dd_Smed_v6_4217_0_1, dd_Smed_v6_4217_0_1, [RH, Score=452, Expect=2e-154]} {RNA1509_37397, RNA1509_42813} {RNA1310_15337, RNA1509_37397, RNA1509_42813} {RNA1509_37397, RNA1509_42813, RNA815_4990}
5.	MligTC455_43776	493	10.27	Mlig455_048582	Neo: - Age: - Region-enriched R5: 2.027/0.00000		0.954	-	-	-	-	-	0.954	Mlig455_048582 {REF} {Length: 2784} {TRANSSPLICED} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=52.3]; Capsular polysaccharide synthesis protein [PF05704.14, score=21.8]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=111, Expect=1e-27]} {RNA1509_11380, RNA1509_49230} {RNA1310_12714, RNA1509_11380, RNA1509_49230} {RNA1509_11380, RNA1509_49230, RNA815_9107.1}
6.	MligTC455_23858	194	4.04	Mlig455_023061	Neo: - Age: -	TADA2B	0.95	-	-	-	-	-	0.950	Mlig455_023061 {REF} {Length: 3588} {TRANSSPLICED} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=21.1]} {Human: ENSG00000173011, TADA2B, transcriptional adaptor 2B, [Score=134, Expect=9e-34]} {Mouse: ENSMUSG00000029196, Tada2b, transcriptional adaptor 2B, [Score=133, Expect=2e-33]} {Dmel: FBgn0037555, Ada2b, transcriptional Adaptor 2b, [Score=109, Expect=6e-25]} {Smed: dd_Smed_v6_7427_0_1, dd_Smed_v6_7427_0_1, [Score=128, Expect=5e-32]} {RNA1509_56799} {RNA1310_15578.1, RNA1509_56799} {RNA1509_56799, RNA815_34032}
7.	MligTC455_28629	66	1.38	Mlig455_049211	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_049211 {REF} {Length: 1026} {NoTransDecoderORF} {RNA1509_39265} {RNA1310_63659} {RNA815_35614}

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