Data search
Results for MligTC455_23982
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23982 | 211 | 4.39 | Mlig455_048625, Mlig455_048745 | Neo: - Age: - Region-enriched R4: 2.863/0.03045 |
Mlig455_048625 {REF} {Length: 2567} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.7]} {RNA1310_15916} {RNA815_6066} Mlig455_048745 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.8]} {RNA1310_15916} {RNA815_6066} |
Cumulative graph for MligTC455_23982
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.586 | 2.791 | 0.51301 | 1.00000 | |
| RegionR2 | -0.823 | 2.791 | 0.98092 | 1.00000 | |
| RegionR3 | 0.396 | 2.791 | 0.66581 | 1.00000 | |
| RegionR4 | 2.863 | 2.791 | 0.00399 | 0.03045 | |
| RegionR5 | 1.586 | 2.791 | 0.03408 | 0.14215 | |
| RegionR6 | 0.53 | 2.791 | 0.58892 | 1.00000 | |
| RegionR7 | -0.836 | 2.791 | 0.98176 | 1.00000 | |
| RegionR8 | -0.129 | 2.791 | 0.89841 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.06 | 2.791 | 0.99996 | 1.00000 | |
| RegenerationR2 | 1.235 | 2.791 | 0.06695 | 0.42238 | |
| RegenerationR3 | 0.994 | 2.791 | 0.17107 | 0.60616 | |
| RegenerationR4 | -0.678 | 2.791 | 0.39030 | 0.80755 | |
| RegenerationR5 | 0.977 | 2.791 | 0.11119 | 0.50330 | |
| RegenerationR6 | 0.902 | 2.791 | 0.21850 | 0.56227 | |
| RegenerationBL | 2.192 | 2.791 | 0.01195 | 0.11178 | |
| RegenerationTP | 1.554 | 2.791 | 0.11368 | 0.51701 |
Genes with expression patterns similar to MligTC455_23982
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23982 | 211 | 4.39 | Mlig455_048625, Mlig455_048745 | Neo: - Age: - Region-enriched R4: 2.863/0.03045 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048625 {REF} {Length: 2567} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.7]} {RNA1310_15916} {RNA815_6066} Mlig455_048745 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.8]} {RNA1310_15916} {RNA815_6066} |
|
| 2. | MligTC455_42877 | 141 | 2.93 | Mlig455_058822 | Neo: - |
0.976 | - | - | 0.976 | - | - | - | Mlig455_058822 {REF} {Length: 1815} {TRANSSPLICED} {Mouse: ENSMUSG00000027424, Mgme1, mitochondrial genome maintenance exonuclease 1, [RH, Score=119, Expect=1e-30]} {Celegans: WBGene00077500, C27H6.9, Mitochondrial genome maintenance exonuclease 1, [RH, Score=64.3, Expect=1e-11]} {Smed: dd_Smed_v6_14245_0_2, dd_Smed_v6_14245_0_2, [RH, Score=112, Expect=2e-29]} {RNA1509_18510} {RNA1310_22411} {RNA815_25218} | |
| 3. | MligTC455_33193 | 320 | 6.66 | Mlig455_000022 | Neo: - |
FIP1L1 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_000022 {REF} {Length: 3253} {TRANSSPLICED} {Pfam: Fip1 motif [PF05182.15, score=71.5]} {Human: ENSG00000145216, FIP1L1, factor interacting with PAPOLA and CPSF1, [RH, Score=92.8, Expect=3e-19]} {Mouse: ENSMUSG00000029227, Fip1l1, FIP1 like 1 (S. cerevisiae), [RH, Score=94.4, Expect=8e-20]} {Dmel: FBgn0037255, Fip1, Factor interacting with poly(A) polymerase 1, [RH, Score=91.7, Expect=7e-19]} {Celegans: WBGene00017988, fipp-1, Factor Interacting with Poly(A) Polymerase, [RH, Score=82.4, Expect=2e-16]} {Smed: dd_Smed_v6_2560_0_1, dd_Smed_v6_2560_0_1, [RH, Score=113, Expect=2e-26]} {RNA1509_14985, RNA1509_37390} {RNA1310_12515, RNA1509_37390} {RNA1509_37390, RNA815_33587} |
| 4. | MligTC455_24714 | 776 | 16.16 | Mlig455_034613 | Neo: - Age: Down-Up-Down |
0.958 | - | - | - | - | - | 0.958 | Mlig455_034613 {REF} {Length: 4206} {TRANSSPLICED} {RNA1509_23175, RNA1509_27911, RNA1509_28754, RNA1509_45584} {RNA1310_20001, RNA1509_27911, RNA1509_28754, RNA1509_45584} {RNA1509_27911, RNA1509_28754, RNA1509_45584, RNA815_11300} | |
| 5. | MligTC455_10344 | 73 | 1.52 | Mlig455_059042, Mlig455_070837 | Neo: - Age: logFC(26M/2M)=0.978 |
SATL1 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_059042 {REF} {Length: 1566} {Pfam: Male Flower Specific protein 18 [PF17352.4, score=34.5]; Lamprin [PF06403.13, score=28.7]} {Human: ENSG00000184788, SATL1, spermidine/spermine N1-acetyl transferase like 1, [Score=116, Expect=6e-28]; ENSG00000129646, QRICH2, glutamine rich 2, [Score=112, Expect=3e-26]} {Mouse: ENSMUSG00000070331, Qrich2, glutamine rich 2, [Score=77.8, Expect=6e-15]} {RNA1310_48943} {RNA815_40874} Mlig455_070837 {REF} {Length: 1824} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_48943} {RNA815_40874} |
| 6. | MligTC455_47343 | 260 | 5.41 | Mlig455_044292 | Neo: - Age: - Region-enriched R5: 1.183/0.04891 |
SMN1 | 0.955 | - | - | 0.955 | - | - | - | Mlig455_044292 {REF} {Length: 1672} {TRANSSPLICED} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=121.6]; Tudor domain [PF00567.26, score=36.8]} {Human: ENSG00000172062, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000275349, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000277773, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000205571, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000273772, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]} {Mouse: ENSMUSG00000021645, Smn1, survival motor neuron 1, [RH, Score=87.8, Expect=2e-20]} {Dmel: FBgn0036641, Smn, survival motor neuron, [RH, Score=66.2, Expect=4e-13]} {Celegans: WBGene00004887, smn-1, SMN (Human Survival Motor Neuron gene) homolog; SMN protein, [RH, Score=62.8, Expect=5e-12]} {RNA1509_35742} {RNA1310_21564.1, RNA1509_35742} {RNA1509_35742, RNA815_23805} |
| 7. | MligTC455_46746 | 155 | 3.22 | Mlig455_050385 | Neo: - Age: - |
ANKRD11 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_050385 {REF} {Length: 5095} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.7]; Ankyrin repeats (many copies) [PF13637.8, score=63.7]; Ankyrin repeats (many copies) [PF13857.8, score=61.1]; Ankyrin repeat [PF00023.32, score=55.4]; Ankyrin repeat [PF13606.8, score=44.6]} {Human: ENSG00000167522, ANKRD11, ankyrin repeat domain 11, [RH, Score=136, Expect=2e-31]} {Mouse: ENSMUSG00000035569, Ankrd11, ankyrin repeat domain 11, [RH, Score=137, Expect=8e-32]; ENSMUSG00000034647, Ankrd12, ankyrin repeat domain 12, [RH, Score=132, Expect=2e-30]} {Dmel: FBgn0036305, CG10984, [RH, Score=105, Expect=1e-22]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=91.7, Expect=4e-18]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [RH, Score=154, Expect=4e-38]} {RNA1509_17750} {RNA1310_3406, RNA1509_17750} {RNA1509_17750, RNA815_33283} |
| 8. | MligTC455_21646 | 208 | 4.32 | Mlig455_020902, Mlig455_020983 | Neo: - Age: Down-Up-Up Region-enriched R5: 2.533/0.00016 |
ATG16L1 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_020902 {REF} {Length: 1821} {RNA1310_73839.1} {RNA815_29021} Mlig455_020983 {REF} {Length: 2639} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=32.0]; WD domain, G-beta repeat [PF00400.34, score=29.4]; Autophagy protein 16 (ATG16) [PF08614.13, score=28.4]} {Human: ENSG00000085978, ATG16L1, autophagy related 16 like 1, [Score=71.2, Expect=2e-12]; ENSG00000281089, ATG16L1, autophagy related 16 like 1, [Score=71.2, Expect=2e-12]} {Mouse: ENSMUSG00000026289, Atg16l1, autophagy related 16-like 1 (S. cerevisiae), [Score=69.3, Expect=4e-12]} {RNA1310_48049} {RNA815_29021} |
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