Data search
Results for MligTC455_47343
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47343 | 260 | 5.41 | Mlig455_044292 | Neo: - Age: - Region-enriched R5: 1.183/0.04891 |
SMN1 | Mlig455_044292 {REF} {Length: 1672} {TRANSSPLICED} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=121.6]; Tudor domain [PF00567.26, score=36.8]} {Human: ENSG00000172062, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000275349, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000277773, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000205571, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000273772, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]} {Mouse: ENSMUSG00000021645, Smn1, survival motor neuron 1, [RH, Score=87.8, Expect=2e-20]} {Dmel: FBgn0036641, Smn, survival motor neuron, [RH, Score=66.2, Expect=4e-13]} {Celegans: WBGene00004887, smn-1, SMN (Human Survival Motor Neuron gene) homolog; SMN protein, [RH, Score=62.8, Expect=5e-12]} {RNA1509_35742} {RNA1310_21564.1, RNA1509_35742} {RNA1509_35742, RNA815_23805} |
Cumulative graph for MligTC455_47343
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.492 | 3.043 | 0.72115 | 1.00000 | |
| RegionR2 | 1.876 | 3.043 | 0.00627 | 0.07454 | |
| RegionR3 | 0.198 | 3.043 | 0.70886 | 1.00000 | |
| RegionR4 | -0.197 | 3.043 | 0.75906 | 1.00000 | |
| RegionR5 | 1.183 | 3.043 | 0.00796 | 0.04891 | |
| RegionR6 | 0.692 | 3.043 | 0.20741 | 0.78312 | |
| RegionR7 | -2.1 | 3.043 | 0.07069 | 0.51102 | |
| RegionR8 | -1.16 | 3.043 | 0.37969 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.094 | 3.043 | 0.48919 | 1.00000 | |
| RegenerationR2 | 0.378 | 3.043 | 0.47425 | 0.86007 | |
| RegenerationR3 | 0.686 | 3.043 | 0.28401 | 0.71581 | |
| RegenerationR4 | 0.012 | 3.043 | 0.97425 | 1.00000 | |
| RegenerationR5 | 0.206 | 3.043 | 0.66247 | 0.93713 | |
| RegenerationR6 | 1.453 | 3.043 | 0.01360 | 0.14371 | |
| RegenerationBL | 2.638 | 3.043 | 0.00285 | 0.04540 | |
| RegenerationTP | 3.428 | 3.043 | 0.00052 | 0.03224 |
Genes with expression patterns similar to MligTC455_47343
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47343 | 260 | 5.41 | Mlig455_044292 | Neo: - Age: - Region-enriched R5: 1.183/0.04891 |
SMN1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044292 {REF} {Length: 1672} {TRANSSPLICED} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=121.6]; Tudor domain [PF00567.26, score=36.8]} {Human: ENSG00000172062, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000275349, SMN1, survival of motor neuron 1, telomeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000277773, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000205571, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]; ENSG00000273772, SMN2, survival of motor neuron 2, centromeric, [RH, Score=96.7, Expect=9e-24]} {Mouse: ENSMUSG00000021645, Smn1, survival motor neuron 1, [RH, Score=87.8, Expect=2e-20]} {Dmel: FBgn0036641, Smn, survival motor neuron, [RH, Score=66.2, Expect=4e-13]} {Celegans: WBGene00004887, smn-1, SMN (Human Survival Motor Neuron gene) homolog; SMN protein, [RH, Score=62.8, Expect=5e-12]} {RNA1509_35742} {RNA1310_21564.1, RNA1509_35742} {RNA1509_35742, RNA815_23805} |
| 2. | MligTC455_23982 | 211 | 4.39 | Mlig455_048625, Mlig455_048745 | Neo: - Age: - Region-enriched R4: 2.863/0.03045 |
0.955 | - | - | 0.955 | - | - | - | Mlig455_048625 {REF} {Length: 2567} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.7]} {RNA1310_15916} {RNA815_6066} Mlig455_048745 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Las1-like [PF04031.15, score=76.8]} {RNA1310_15916} {RNA815_6066} |
|
| 3. | MligTC455_42877 | 141 | 2.93 | Mlig455_058822 | Neo: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_058822 {REF} {Length: 1815} {TRANSSPLICED} {Mouse: ENSMUSG00000027424, Mgme1, mitochondrial genome maintenance exonuclease 1, [RH, Score=119, Expect=1e-30]} {Celegans: WBGene00077500, C27H6.9, Mitochondrial genome maintenance exonuclease 1, [RH, Score=64.3, Expect=1e-11]} {Smed: dd_Smed_v6_14245_0_2, dd_Smed_v6_14245_0_2, [RH, Score=112, Expect=2e-29]} {RNA1509_18510} {RNA1310_22411} {RNA815_25218} |
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