TomoSeq data search

Data search

Results for MligTC455_38572

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_38572

208

4.33

Mlig455_060781

Neo: -

Age: -

TTC30B

Mlig455_060781 {REF} {Length: 3017} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=61.6]; Tetratricopeptide repeat [PF07719.19, score=57.2]; Tetratricopeptide repeat [PF13424.8, score=41.4]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=40.1]; Tetratricopeptide repeat [PF00515.30, score=38.6]; Tetratricopeptide repeat [PF13432.8, score=35.4]; Tetratricopeptide repeat [PF13428.8, score=30.0]; TPR repeat [PF13414.8, score=26.7]; Tetratricopeptide repeat [PF13174.8, score=24.4]; Tetratricopeptide repeat [PF13176.8, score=22.7]; Tetratricopeptide repeat [PF13181.8, score=20.9]; Tetratricopeptide repeat [PF13371.8, score=19.0]; Tetratricopeptide repeat [PF13374.8, score=19.0]} {Human: ENSG00000196659, TTC30B, tetratricopeptide repeat domain 30B, [RH, Score=863, Expect=0.0]; ENSG00000197557, TTC30A, tetratricopeptide repeat domain 30A, [RH, Score=854, Expect=0.0]} {Mouse: ENSMUSG00000075271, Ttc30a1, tetratricopeptide repeat domain 30A1, [RH, Score=863, Expect=0.0]; ENSMUSG00000075273, Ttc30b, tetratricopeptide repeat domain 30B, [RH, Score=859, Expect=0.0]; ENSMUSG00000075272, Ttc30a2, tetratricopeptide repeat domain 30A2, [RH, Score=853, Expect=0.0]} {Dmel: FBgn0032470, CG5142, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001117, dyf-1, Tetratricopeptide repeat protein 30 homolog, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_8798_0_1, dd_Smed_v6_8798_0_1, [RH, Score=971, Expect=0.0]} {RNA1509_15898} {RNA1310_10695, RNA1509_15898} {RNA1509_15898, RNA815_3646.1}

Cumulative graph for MligTC455_38572

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.266	2.619	0.11951	0.71123
RegionR2	1.444	2.619	0.14445	0.47362
RegionR3	1.278	2.619	0.11884	0.59689
RegionR4	-0.617	2.619	0.96703	1.00000
RegionR5	0.275	2.619	0.72746	1.00000
RegionR6	0.568	2.619	0.56056	1.00000
RegionR7	1.159	2.619	0.30289	0.93797
RegionR8	2.159	2.619	0.05333	0.44997

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.521	2.619	0.99994	1.00000
RegenerationR2	0.532	2.619	0.33916	0.77436
RegenerationR3	0.034	2.619	0.95910	1.00000
RegenerationR4	0.931	2.619	0.15501	0.58556
RegenerationR5	-0.117	2.619	0.84424	1.00000
RegenerationR6	0.748	2.619	0.26759	0.61756
RegenerationBL	1.423	2.619	0.02965	0.19176
RegenerationTP	-0.77	2.619	0.39190	0.82343

Genes with expression patterns similar to MligTC455_38572

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_38572	208	4.33	Mlig455_060781	Neo: - Age: -	TTC30B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_060781 {REF} {Length: 3017} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=61.6]; Tetratricopeptide repeat [PF07719.19, score=57.2]; Tetratricopeptide repeat [PF13424.8, score=41.4]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=40.1]; Tetratricopeptide repeat [PF00515.30, score=38.6]; Tetratricopeptide repeat [PF13432.8, score=35.4]; Tetratricopeptide repeat [PF13428.8, score=30.0]; TPR repeat [PF13414.8, score=26.7]; Tetratricopeptide repeat [PF13174.8, score=24.4]; Tetratricopeptide repeat [PF13176.8, score=22.7]; Tetratricopeptide repeat [PF13181.8, score=20.9]; Tetratricopeptide repeat [PF13371.8, score=19.0]; Tetratricopeptide repeat [PF13374.8, score=19.0]} {Human: ENSG00000196659, TTC30B, tetratricopeptide repeat domain 30B, [RH, Score=863, Expect=0.0]; ENSG00000197557, TTC30A, tetratricopeptide repeat domain 30A, [RH, Score=854, Expect=0.0]} {Mouse: ENSMUSG00000075271, Ttc30a1, tetratricopeptide repeat domain 30A1, [RH, Score=863, Expect=0.0]; ENSMUSG00000075273, Ttc30b, tetratricopeptide repeat domain 30B, [RH, Score=859, Expect=0.0]; ENSMUSG00000075272, Ttc30a2, tetratricopeptide repeat domain 30A2, [RH, Score=853, Expect=0.0]} {Dmel: FBgn0032470, CG5142, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001117, dyf-1, Tetratricopeptide repeat protein 30 homolog, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_8798_0_1, dd_Smed_v6_8798_0_1, [RH, Score=971, Expect=0.0]} {RNA1509_15898} {RNA1310_10695, RNA1509_15898} {RNA1509_15898, RNA815_3646.1}
2.	MligTC455_11576	215	4.49	Mlig455_045740	Neo: - Age: -		2.52	0.793	-	-	0.958	-	0.769	Mlig455_045740 {REF} {Length: 672} {NoTransDecoderORF} {RNA1509_6409} {RNA1310_984} {RNA815_7594.1}
3.	MligTC455_32863	188	3.91	Mlig455_028353	Neo: Int S/G2/M Age: Up-Up-Down		1.695	-	-	0.961	-	-	0.734	Mlig455_028353 {REF} {Length: 1978} {TRANSSPLICED} {RNA1509_40955} {RNA1310_60768} {RNA815_8954.1}
4.	MligTC455_12147	545	11.35	Mlig455_004946, Mlig455_019710	Neo: - Age: Up-Down-Down		1.686	-	-	0.734	0.952	-	-	Mlig455_004946 {REF} {Length: 2666} {RNA1509_18139} {RNA1310_48040} {RNA815_12955} Mlig455_019710 {REF} {Length: 2716} {RNA1509_18139} {RNA1310_48040} {RNA815_12955}
5.	MligTC455_35010	516	10.75	Mlig455_054169	Neo: - Age: logFC(26M/2M)=-0.545 Region-enriched R5: 1.964/0.00569	CALML5	0.978	-	-	-	0.978	-	-	Mlig455_054169 {REF} {Length: 914} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=51.8]; EF-hand domain pair [PF13499.8, score=50.0]; EF-hand domain [PF13405.8, score=42.7]; EF-hand domain pair [PF13833.8, score=41.2]; EF hand [PF13202.8, score=39.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=27.0]} {Human: ENSG00000178372, CALML5, calmodulin like 5, [Score=56.2, Expect=3e-10]} {Mouse: ENSMUSG00000005649, Cabp5, calcium binding protein 5, [Score=55.1, Expect=8e-10]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00006861, cal-5, CALmodulin related genes, [Score=62.0, Expect=8e-13]} {Smed: dd_Smed_v6_11942_0_1, dd_Smed_v6_11942_0_1, [Score=50.4, Expect=2e-08]} {RNA1509_32665} {RNA1310_29494.2} {RNA815_16454.1}
6.	MligTC455_46119	436	9.08	Mlig455_049511	Neo: - Age: -	ARPC5	0.978	-	-	0.978	-	-	-	Mlig455_049511 {REF} {Length: 3235} {TRANSSPLICED} {Pfam: ARP2/3 complex 16 kDa subunit (p16-Arc) [PF04699.16, score=101.7]} {Human: ENSG00000162704, ARPC5, actin related protein 2/3 complex subunit 5, [Score=100, Expect=3e-24]} {Mouse: ENSMUSG00000008475, Arpc5, actin related protein 2/3 complex, subunit 5, [Score=99.4, Expect=5e-24]} {Dmel: FBgn0031437, Arpc5, Actin-related protein 2/3 complex, subunit 5, [Score=103, Expect=1e-25]} {Smed: dd_Smed_v6_781_0_1, dd_Smed_v6_781_0_1, [Score=80.1, Expect=1e-17]} {RNA1509_17990} {RNA1310_17080} {RNA815_4362.1}
7.	MligTC455_24573	258	5.38	Mlig455_026373	Neo: - Age: Up-Down-Down	ZNFX1	0.97	-	-	0.970	-	-	-	Mlig455_026373 {REF} {Length: 6810} {Pfam: AAA domain [PF13087.8, score=127.1]; AAA domain [PF13086.8, score=91.1]; AAA domain [PF13245.8, score=33.7]; AAA domain [PF13604.8, score=27.0]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [RH, Score=672, Expect=0.0]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0039165, CG6204, [RH, Score=186, Expect=1e-47]} {Celegans: WBGene00014208, ZK1067.2, [RH, Score=374, Expect=2e-104]} {Smed: dd_Smed_v6_2581_0_1, dd_Smed_v6_2581_0_1, [Score=1086, Expect=0.0]} {RNA1509_2240, RNA1509_30772} {RNA1310_697.1, RNA1509_30772} {RNA1509_30772, RNA815_202}
8.	MligTC455_52441	370	7.71	Mlig455_034317, Mlig455_034375, Mlig455_043874	Neo: - Age: Down-Down-Up		0.966	-	-	-	-	-	0.966	Mlig455_034317 {REF} {Length: 3867} {Pfam: Crescentin protein [PF19220.2, score=18.7]; Filament-like plant protein, long coiled-coil [PF05911.13, score=17.3]} {RNA1509_41785} {RNA1310_962.1} {RNA815_15555} Mlig455_034375 {REF} {Length: 4566} {RNA1509_50404, RNA1509_57808} {RNA1310_942.1, RNA1509_50404} {RNA1509_50404, RNA815_15555} Mlig455_043874 {REF} {Length: 6498} {Pfam: Crescentin protein [PF19220.2, score=18.7]; Filament-like plant protein, long coiled-coil [PF05911.13, score=17.3]} {RNA1509_57808} {RNA1310_962.1, RNA1509_57808} {RNA1509_57808, RNA815_15555}
9.	MligTC455_52565	271	5.65	Mlig455_026362	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.320		0.956	-	-	0.956	-	-	-	Mlig455_026362 {REF} {Length: 1068} {NoTransDecoderORF} {RNA1509_33925} {RNA1310_12230.1} {RNA815_46685}
10.	MligTC455_21288	421	8.76	Mlig455_054900	Neo: - Age: -	CCNY	0.954	-	-	-	0.954	-	-	Mlig455_054900 {REF} {Length: 3728} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=37.2]; Cyclin [PF08613.13, score=29.5]} {Human: ENSG00000108100, CCNY, cyclin Y, [RH, Score=268, Expect=2e-86]; ENSG00000163249, CCNYL1, cyclin Y like 1, [RH, Score=260, Expect=7e-83]} {Mouse: ENSMUSG00000024286, Ccny, cyclin Y, [RH, Score=271, Expect=1e-87]; ENSMUSG00000070871, Ccnyl1, cyclin Y-like 1, [RH, Score=261, Expect=2e-83]} {Dmel: FBgn0032378, CycY, Cyclin Y, [RH, Score=261, Expect=4e-83]} {Celegans: WBGene00022697, cyy-1, Cyclin-Y, [RH, Score=275, Expect=3e-89]} {Smed: dd_Smed_v6_8226_0_1, dd_Smed_v6_8226_0_1, [Score=245, Expect=6e-77]} {RNA1509_8018} {RNA1310_8716, RNA1509_8018} {RNA1509_8018, RNA815_15699}
11.	MligTC455_19177	1389	28.93	Mlig455_016869	Neo: - Age: Down-Up-Down		0.953	-	-	-	-	0.953	-	Mlig455_016869 {REF} {Length: 762} {Pfam: DBP10CT (NUC160) domain [PF08147.14, score=19.4]} {RNA1509_17722} {RNA1310_78355, RNA1509_17722} {RNA1509_17722, RNA815_41078}
12.	MligTC455_21538	956	19.92	Mlig455_020760	Neo: - Age: logFC(26M/2M)=-0.321	ZNF687	0.952	-	-	-	0.952	-	-	Mlig455_020760 {REF} {Length: 4406} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=29.7]; Zinc finger, C2H2 type [PF00096.28, score=27.3]; GAGA factor [PF09237.13, score=19.8]} {Human: ENSG00000143373, ZNF687, zinc finger protein 687, [RH, Score=102, Expect=2e-21]} {Mouse: ENSMUSG00000019338, Zfp687, zinc finger protein 687, [RH, Score=106, Expect=7e-23]} {Dmel: FBgn0004893, bowl, brother of odd with entrails limited, [Score=57.8, Expect=4e-08]} {Celegans: WBGene00003015, lin-29, Transcription factor, [Score=52.4, Expect=1e-06]} {RNA1509_4433} {RNA1310_2143.1} {RNA815_12738}
13.	MligTC455_34228	590	12.3	Mlig455_045547, Mlig455_052636	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_045547 {REF} {Length: 2733} {TRANSSPLICED} {RNA1509_30671} {RNA1310_2435} {RNA815_29254} Mlig455_052636 {REF} {Length: 2733} {TRANSSPLICED} {RNA1509_30671, RNA1509_32835} {RNA1310_2435, RNA1509_30671, RNA1509_32835} {RNA1509_30671, RNA1509_32835, RNA815_29254}

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