TomoSeq data search

Data search

Results for MligTC455_17269

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_17269	486	10.13	Mlig455_025715, Mlig455_025767	Neo: - Age: Up-Down-Down	MAP3K3	Mlig455_025715 {REF} {Length: 8424} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.4]; PB1 domain [PF00564.26, score=24.9]; Fungal protein kinase [PF17667.3, score=22.9]; Kinase-like [PF14531.8, score=20.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.1]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=6e-105]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=341, Expect=1e-103]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=338, Expect=6e-103]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=336, Expect=5e-102]} {Dmel: FBgn0024329, Mekk1, [Score=163, Expect=3e-40]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=166, Expect=3e-41]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=281, Expect=1e-82]} {RNA1509_28700} {RNA1310_9149} {RNA815_5510} Mlig455_025767 {REF} {Length: 6531} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=232.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=151.4]; PB1 domain [PF00564.26, score=27.0]; Fungal protein kinase [PF17667.3, score=24.7]; Kinase-like [PF14531.8, score=23.5]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=348, Expect=1e-112]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=345, Expect=3e-111]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=4e-111]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=340, Expect=9e-110]} {Dmel: FBgn0024329, Mekk1, [Score=166, Expect=2e-43]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=167, Expect=8e-45]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=286, Expect=1e-89]} {RNA1509_34435, RNA1509_39187} {RNA1310_8418.1, RNA1509_34435, RNA1509_39187} {RNA1509_34435, RNA1509_39187, RNA815_5510}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17269

486

10.13

Mlig455_025715, Mlig455_025767

Neo: -

Age: Up-Down-Down

MAP3K3

Mlig455_025715 {REF} {Length: 8424} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.4]; PB1 domain [PF00564.26, score=24.9]; Fungal protein kinase [PF17667.3, score=22.9]; Kinase-like [PF14531.8, score=20.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.1]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=6e-105]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=341, Expect=1e-103]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=338, Expect=6e-103]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=336, Expect=5e-102]} {Dmel: FBgn0024329, Mekk1, [Score=163, Expect=3e-40]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=166, Expect=3e-41]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=281, Expect=1e-82]} {RNA1509_28700} {RNA1310_9149} {RNA815_5510}

Mlig455_025767 {REF} {Length: 6531} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=232.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=151.4]; PB1 domain [PF00564.26, score=27.0]; Fungal protein kinase [PF17667.3, score=24.7]; Kinase-like [PF14531.8, score=23.5]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=348, Expect=1e-112]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=345, Expect=3e-111]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=4e-111]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=340, Expect=9e-110]} {Dmel: FBgn0024329, Mekk1, [Score=166, Expect=2e-43]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=167, Expect=8e-45]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=286, Expect=1e-89]} {RNA1509_34435, RNA1509_39187} {RNA1310_8418.1, RNA1509_34435, RNA1509_39187} {RNA1509_34435, RNA1509_39187, RNA815_5510}

Cumulative graph for MligTC455_17269

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.502	3.738	0.73619	1.00000
RegionR2	0.002	3.738	0.99664	1.00000
RegionR3	0.255	3.738	0.56802	1.00000
RegionR4	0.498	3.738	0.36337	0.68671
RegionR5	-0.405	3.738	0.35870	0.71024
RegionR6	-0.405	3.738	0.39784	0.97048
RegionR7	0.159	3.738	0.77500	1.00000
RegionR8	0.398	3.738	0.53914	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.776	3.738	0.27148	0.97513
RegenerationR2	0.531	3.738	0.23566	0.68312
RegenerationR3	-0.637	3.738	0.21199	0.64785
RegenerationR4	-0.545	3.738	0.30735	0.74836
RegenerationR5	0.719	3.738	0.13864	0.55027
RegenerationR6	0.377	3.738	0.47950	0.79150
RegenerationBL	-1.248	3.738	0.09174	0.35532
RegenerationTP	-0.48	3.738	0.45804	0.87269

Genes with expression patterns similar to MligTC455_17269

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17269	486	10.13	Mlig455_025715, Mlig455_025767	Neo: - Age: Up-Down-Down	MAP3K3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025715 {REF} {Length: 8424} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.4]; PB1 domain [PF00564.26, score=24.9]; Fungal protein kinase [PF17667.3, score=22.9]; Kinase-like [PF14531.8, score=20.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.1]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=6e-105]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=341, Expect=1e-103]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=338, Expect=6e-103]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=336, Expect=5e-102]} {Dmel: FBgn0024329, Mekk1, [Score=163, Expect=3e-40]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=166, Expect=3e-41]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=281, Expect=1e-82]} {RNA1509_28700} {RNA1310_9149} {RNA815_5510} Mlig455_025767 {REF} {Length: 6531} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=232.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=151.4]; PB1 domain [PF00564.26, score=27.0]; Fungal protein kinase [PF17667.3, score=24.7]; Kinase-like [PF14531.8, score=23.5]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=348, Expect=1e-112]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=345, Expect=3e-111]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=4e-111]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=340, Expect=9e-110]} {Dmel: FBgn0024329, Mekk1, [Score=166, Expect=2e-43]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=167, Expect=8e-45]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=286, Expect=1e-89]} {RNA1509_34435, RNA1509_39187} {RNA1310_8418.1, RNA1509_34435, RNA1509_39187} {RNA1509_34435, RNA1509_39187, RNA815_5510}
2.	MligTC455_46169	87	1.82	Mlig455_037353	Neo: - Age: Down-Up-Up	GTF2IRD2B	0.97	-	-	-	-	0.970	-	Mlig455_037353 {REF} {Length: 4346} {Pfam: Spin-doc zinc-finger [PF18658.3, score=24.3]; Domain of unknown function (DUF4371) [PF14291.8, score=19.8]} {Human: ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [Score=356, Expect=9e-112]; ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [Score=355, Expect=2e-111]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [Score=326, Expect=1e-100]} {Smed: dd_Smed_v6_25074_0_1, dd_Smed_v6_25074_0_1, [Score=222, Expect=8e-65]} {RNA1509_362} {RNA1310_1521.1} {RNA815_920.1}
3.	MligTC455_24701	111	2.32	Mlig455_002321	Neo: - Age: Up-Down-Down	RPAP1	0.956	-	-	-	-	0.956	-	Mlig455_002321 {REF} {Length: 4735} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.2]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=3e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=96.3, Expect=1e-19]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [Score=80.1, Expect=7e-15]} {RNA1509_31024, RNA1509_48382} {RNA1310_8433, RNA1509_31024, RNA1509_48382} {RNA1509_31024, RNA1509_48382, RNA815_11401.1}
4.	MligTC455_55327	12	0.26	Mlig455_035498	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_035498 {REF} {Length: 3149} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=127.7]; Endonuclease-reverse transcriptase [PF14529.8, score=75.9]} {RNA1509_32599} {RNA1310_1123.1} {RNA815_252.1}
5.	MligTC455_12961	32	0.66	Mlig455_042954	Neo: Germline Age: -		0.955	-	-	-	-	0.955	-	Mlig455_042954 {REF} {Length: 9103} {Pfam: Retrotransposon gag protein [PF03732.19, score=25.9]; Zinc knuckle [PF00098.25, score=23.7]} {RNA1509_48613} {RNA1310_992.1, RNA1509_48613} {RNA1509_48613, RNA815_7963}
6.	MligTC455_54129	505	10.52	Mlig455_001624	Neo: - Age: -		0.954	-	-	0.954	-	-	-	Mlig455_001624 {REF} {Length: 531} {TRANSSPLICED} {RNA1509_6997} {RNA1310_20264.3} {RNA815_34346}
7.	MligTC455_21926	225	4.69	Mlig455_003629	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_003629 {REF} {Length: 2548} {RNA1509_15605} {RNA1310_4409.1} {RNA815_14135}
8.	MligTC455_23622	626	13.03	Mlig455_069362	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.469 Region-enriched R4: 1.674/0.00636	RPS6KB1	0.953	-	-	0.953	-	-	-	Mlig455_069362 {REF} {Length: 5681} {Pfam: Protein kinase domain [PF00069.27, score=223.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.0]; Protein kinase C terminal domain [PF00433.26, score=40.0]; Kinase-like [PF14531.8, score=20.6]; Fungal protein kinase [PF17667.3, score=19.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.3]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=474, Expect=2e-164]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [RH, Score=471, Expect=1e-162]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=474, Expect=2e-163]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=5e-159]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [RH, Score=461, Expect=5e-159]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=454, Expect=6e-156]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=446, Expect=3e-152]} {Smed: dd_Smed_v6_11674_0_1, dd_Smed_v6_11674_0_1, [RH, Score=424, Expect=5e-144]} {RNA1509_13825} {RNA1310_8029, RNA1509_13825} {RNA1509_13825, RNA815_1183}
9.	MligTC455_43212	25	0.51	Mlig455_030578	Neo: - Age: -	ZNF16	0.953	-	-	-	-	0.953	-	Mlig455_030578 {REF} {Length: 1942} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=55.4]; Zinc finger, C2H2 type [PF00096.28, score=51.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=38.5]; Zinc-finger of C2H2 type [PF12874.9, score=34.0]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=25.9]; Zinc-fingers and homeoboxes C2H2 finger domain [PF18387.3, score=20.8]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=19.4]} {Human: ENSG00000170631, ZNF16, zinc finger protein 16, [Score=84.7, Expect=6e-17]; ENSG00000178175, ZNF366, zinc finger protein 366, [Score=82.0, Expect=4e-16]; ENSG00000213973, ZNF99, zinc finger protein 99, [Score=81.6, Expect=7e-16]; ENSG00000196350, ZNF729, zinc finger protein 729, [Score=80.5, Expect=2e-15]; ENSG00000180787, ZFP3, ZFP3 zinc finger protein, [Score=80.5, Expect=9e-16]} {Mouse: ENSMUSG00000059897, Zfp930, zinc finger protein 930, [Score=83.2, Expect=7e-17]; ENSMUSG00000050919, Zfp366, zinc finger protein 366, [Score=80.1, Expect=1e-15]} {Dmel: FBgn0038550, CG17801, [Score=68.9, Expect=2e-12]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=52.4, Expect=1e-07]} {Smed: dd_Smed_v6_11840_0_1, dd_Smed_v6_11840_0_1, [Score=57.8, Expect=4e-09]} {RNA1509_14767, RNA1509_19735} {RNA1310_5349, RNA1509_19735} {RNA1509_19735, RNA815_28876}
10.	MligTC455_15129	508	10.58	Mlig455_017193	Neo: - Age: -	FAM149B1	0.952	-	-	-	-	0.952	-	Mlig455_017193 {REF} {Length: 2324} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3719) [PF12516.10, score=38.6]} {Human: ENSG00000138286, FAM149B1, family with sequence similarity 149 member B1, [RH, Score=70.9, Expect=3e-12]} {Mouse: ENSMUSG00000070044, Fam149a, family with sequence similarity 149, member A, [RH, Score=82.8, Expect=6e-16]} {Smed: dd_Smed_v6_13092_0_1, dd_Smed_v6_13092_0_1, [RH, Score=119, Expect=7e-28]} {RNA1509_14230} {RNA1310_3812.1, RNA1509_14230} {RNA1509_14230, RNA815_10871}