TomoSeq data search

Data search

Results for MligTC455_24789

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24789	13	0.27	Mlig455_048511	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.721	RAC1	Mlig455_048511 {REF} {Length: 2521} {Pfam: Ras family [PF00071.24, score=120.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.9]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=196, Expect=7e-62]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=189, Expect=2e-59]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=189, Expect=3e-59]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=196, Expect=5e-62]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=191, Expect=4e-60]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=189, Expect=1e-59]} {Dmel: FBgn0010333, Rac1, [Score=191, Expect=2e-60]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=191, Expect=2e-60]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=178, Expect=2e-55]} {RNA1509_5141} {RNA1310_6414} {RNA815_7410}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24789

0.27

Mlig455_048511

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.721

RAC1

Mlig455_048511 {REF} {Length: 2521} {Pfam: Ras family [PF00071.24, score=120.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.9]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=196, Expect=7e-62]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=189, Expect=2e-59]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=189, Expect=3e-59]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=196, Expect=5e-62]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=191, Expect=4e-60]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=189, Expect=1e-59]} {Dmel: FBgn0010333, Rac1, [Score=191, Expect=2e-60]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=191, Expect=2e-60]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=178, Expect=2e-55]} {RNA1509_5141} {RNA1310_6414} {RNA815_7410}

Cumulative graph for MligTC455_24789

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.426	0.571	1.00000	1.00000
RegionR2	0.479	0.571	0.99996	1.00000
RegionR3	-0.344	0.571	0.99994	1.00000
RegionR4	-1.055	0.571	0.99987	1.00000
RegionR5	-0.977	0.571	0.99998	1.00000
RegionR6	-0.886	0.571	0.99999	1.00000
RegionR7	0.659	0.571	0.99998	1.00000
RegionR8	1.699	0.571	0.99999	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.516	0.571	1.00000	1.00000
RegenerationR2	1.214	0.571	0.99997	1.00000
RegenerationR3	0.073	0.571	1.00000	1.00000
RegenerationR4	-0.949	0.571	0.99992	1.00000
RegenerationR5	1.832	0.571	0.99972	1.00000
RegenerationR6	-0.984	0.571	0.99996	1.00000
RegenerationBL	1.715	0.571	0.99987	1.00000
RegenerationTP	-1.334	0.571	0.99996	1.00000

Genes with expression patterns similar to MligTC455_24789

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24789	13	0.27	Mlig455_048511	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.721	RAC1	1	-	-	-	-	1.000	-	Mlig455_048511 {REF} {Length: 2521} {Pfam: Ras family [PF00071.24, score=120.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.9]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=196, Expect=7e-62]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=189, Expect=2e-59]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=189, Expect=3e-59]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=196, Expect=5e-62]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=191, Expect=4e-60]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=189, Expect=1e-59]} {Dmel: FBgn0010333, Rac1, [Score=191, Expect=2e-60]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=191, Expect=2e-60]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=178, Expect=2e-55]} {RNA1509_5141} {RNA1310_6414} {RNA815_7410}
2.	MligTC455_12747	22	0.46	Mlig455_046036	Neo: - Age: -	PRXL2C	0.988	-	-	-	-	0.988	-	Mlig455_046036 {REF} {Length: 937} {Pfam: AhpC/TSA antioxidant enzyme [PF13911.8, score=34.1]; AhpC/TSA family [PF00578.23, score=28.5]; Redoxin [PF08534.12, score=26.5]} {Human: ENSG00000158122, PRXL2C, peroxiredoxin like 2C, [RH, Score=137, Expect=1e-39]} {Mouse: ENSMUSG00000021482, Aaed1, AhpC/TSA antioxidant enzyme domain containing 1, [RH, Score=134, Expect=1e-38]} {Smed: dd_Smed_v6_4424_0_1, dd_Smed_v6_4424_0_1, [Score=135, Expect=1e-39]} {RNA1509_42365} {RNA1310_38096} {RNA815_19477}
3.	MligTC455_43560	18	0.37	Mlig455_061120	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_061120 {REF} {Length: 1849} {TRANSSPLICED} {RNA1509_8850} {RNA1310_6911} {RNA815_1680}
4.	MligTC455_05917	13	0.26	Mlig455_028963	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_028963 {REF} {Length: 426} {NoTransDecoderORF} {RNA1509_23859} {RNA1310_19999} {RNA815_1199.8}