Data search
Results for MligTC455_24805
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24805 | 4322 | 90.04 | Mlig455_065919 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.454 Region-enriched R7: 1.214/0.00538 Regeneration-downregulated BL: -1.666 Regeneration-depleted BL: -1.666 |
Mlig455_065919 {REF} {Length: 723} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534} {RNA1310_57754.2} {RNA815_27242} |
Cumulative graph for MligTC455_24805
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.416 | 6.6 | 0.03009 | 0.44560 | |
| RegionR2 | 0.444 | 6.6 | 0.27550 | 0.66063 | |
| RegionR3 | -0.049 | 6.6 | 0.88956 | 1.00000 | |
| RegionR4 | -0.439 | 6.6 | 0.25722 | 0.55867 | |
| RegionR5 | -0.87 | 6.6 | 0.01344 | 0.07179 | |
| RegionR6 | 0.599 | 6.6 | 0.06645 | 0.48186 | |
| RegionR7 | 1.214 | 6.6 | 0.00009 | 0.00538 | |
| RegionR8 | 0.517 | 6.6 | 0.15525 | 0.71384 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.099 | 6.6 | 0.17512 | 0.91710 | |
| RegenerationR2 | -0.41 | 6.6 | 0.32186 | 0.75963 | |
| RegenerationR3 | 0.217 | 6.6 | 0.62003 | 0.91690 | |
| RegenerationR4 | 0.474 | 6.6 | 0.28992 | 0.73404 | |
| RegenerationR5 | 1.174 | 6.6 | 0.00674 | 0.14926 | |
| RegenerationR6 | -0.296 | 6.6 | 0.49656 | 0.80352 | |
| RegenerationBL | -1.666 | 6.6 | 0.00017 | 0.00650 | Specific for BL: -1.666 |
| RegenerationTP | 1.096 | 6.6 | 0.00579 | 0.12739 |
Genes with expression patterns similar to MligTC455_24805
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24805 | 4322 | 90.04 | Mlig455_065919 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.454 Region-enriched R7: 1.214/0.00538 Regeneration-downregulated BL: -1.666 Regeneration-depleted BL: -1.666 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065919 {REF} {Length: 723} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534} {RNA1310_57754.2} {RNA815_27242} | |
| 2. | MligTC455_24804 | 9938 | 207.05 | Mlig455_016852 | Neo: - Age: Down-Up-Down Region-enriched R7: 1.271/0.00174 Regeneration-downregulated BL: -2.176 Regeneration-depleted BL: -2.176 |
3.731 | - | 0.928 | - | 0.973 | 0.890 | 0.940 | Mlig455_016852 {REF} {Length: 655} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.6]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.7, Expect=2e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.2, Expect=4e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=71.6, Expect=1e-17]} {RNA1509_43581} {RNA1310_57754.2} {RNA815_27242} | |
| 3. | MligTC455_24806 | 13314 | 277.38 | Mlig455_070013 | Neo: - Age: - Region-enriched R7: 1.265/0.00023 Regeneration-downregulated BL: -1.782 Regeneration-depleted BL: -1.782 |
3.555 | - | 0.921 | - | 0.921 | 0.979 | 0.734 | Mlig455_070013 {REF} {Length: 1645} {Pfam: Thymosin beta-4 family [PF01290.22, score=72.0]} {Dmel: FBgn0026084, cib, ciboulot, [Score=49.3, Expect=5e-08]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=46.6, Expect=5e-07]} {Smed: dd_Smed_v6_12_0_1, dd_Smed_v6_12_0_1, [RH, Score=72.0, Expect=1e-17]} {RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1310_57754.2, RNA1509_1534, RNA1509_43581, RNA1509_841} {RNA1509_1534, RNA1509_43581, RNA1509_841, RNA815_27242} | |
| 4. | MligTC455_20401 | 11443 | 238.4 | Mlig455_013098, Mlig455_013191 | Neo: - Age: Up-Down-Up Region-enriched R7: 5.239/0.00000 Regeneration-downregulated BL: -6.183 Regeneration-depleted BL: -6.183 |
2.605 | - | - | - | 0.953 | 0.819 | 0.833 | Mlig455_013098 {REF} {Length: 379} {RNA1509_2705} {RNA1310_107754} {RNA815_47935} Mlig455_013191 {REF} {Length: 379} {RNA1509_2705} {RNA1310_107754} {RNA815_47935} |
|
| 5. | MligTC455_38747 | 478 | 9.95 | Mlig455_067326 | Neo: - Age: - Region-enriched R6: 2.933/0.00107 |
1.854 | - | - | - | 0.885 | - | 0.969 | Mlig455_067326 {REF} {Length: 2531} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=25.1]} {Smed: dd_Smed_v6_11758_0_1, dd_Smed_v6_11758_0_1, [RH, Score=53.1, Expect=1e-08]} {RNA1509_16620} {RNA1310_13139.1} {RNA815_14453} | |
| 6. | MligTC455_22202 | 8064 | 168 | Mlig455_002382, Mlig455_044552 | Neo: - Age: - Regeneration-downregulated BL: -1.514 Regeneration-depleted BL: -1.514 |
TAGLN3 | 1.839 | - | - | - | 0.875 | 0.964 | - | Mlig455_002382 {REF} {Length: 3420} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA1509_7417} {RNA1310_27238, RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022} {RNA1509_24477, RNA1509_26578, RNA1509_36683, RNA1509_51022, RNA815_11370} Mlig455_044552 {REF} {Length: 3421} {Pfam: Calponin homology (CH) domain [PF00307.33, score=67.9]; Calponin family repeat [PF00402.20, score=49.9]} {Human: ENSG00000144834, TAGLN3, transgelin 3, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000022658, Tagln3, transgelin 3, [RH, Score=147, Expect=7e-45]} {Dmel: FBgn0002789, Mp20, Muscle protein 20, [Score=185, Expect=6e-60]} {Celegans: WBGene00000777, cpn-1, CPN-1; CalPoNin, [Score=129, Expect=1e-37]} {Smed: dd_Smed_v6_1512_0_1, dd_Smed_v6_1512_0_1, [Score=256, Expect=6e-88]} {RNA1509_7417} {RNA1310_27238, RNA1509_7417} {RNA1509_7417, RNA815_11370} |
| 7. | MligTC455_41824 | 194 | 4.03 | Mlig455_048229 | Neo: - Age: - Region-enriched R2: 3.040/0.03860 |
1.753 | - | - | 0.796 | - | - | 0.957 | Mlig455_048229 {REF} {Length: 769} {RNA1509_49797} {RNA1310_60350, RNA1509_49797} {RNA1509_49797, RNA815_30999} | |
| 8. | MligTC455_24114 | 231 | 4.82 | Mlig455_016686, Mlig455_016687 | Neo: - Age: logFC(26M/2M)=-0.296 Region-enriched R7: 3.320/0.00033 |
1.704 | - | 0.740 | - | - | 0.964 | - | Mlig455_016686 {REF} {Length: 2328} {Pfam: EF hand [PF00036.34, score=29.9]; EF-hand domain [PF13405.8, score=29.0]; EF-hand domain pair [PF13499.8, score=23.4]} {Dmel: FBgn0020907, Scp2, Sarcoplasmic calcium-binding protein 2, [RH, Score=117, Expect=7e-33]} {Celegans: WBGene00023408, cex-2, Calexcitin-2, [RH, Score=86.3, Expect=7e-21]} {RNA1509_23461} {RNA1310_36372, RNA1509_23461} {RNA1509_23461, RNA815_14705} Mlig455_016687 {REF} {Length: 945} {Pfam: EF hand [PF00036.34, score=38.8]; EF-hand domain pair [PF13833.8, score=30.7]; Dockerin type I domain [PF00404.20, score=29.9]; EF-hand domain pair [PF13499.8, score=25.2]; EF-hand domain [PF13405.8, score=24.0]} {Dmel: FBgn0020907, Scp2, Sarcoplasmic calcium-binding protein 2, [Score=79.0, Expect=6e-18]} {Celegans: WBGene00023408, cex-2, Calexcitin-2, [Score=44.7, Expect=8e-06]} {RNA1509_23461} {RNA1310_36372} {RNA815_14705} |
|
| 9. | MligTC455_34887 | 559 | 11.64 | Mlig455_054994 | Neo: - Age: - |
PROM1 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_054994 {REF} {Length: 5116} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=237.2]; Predicted membrane protein (DUF2207) [PF09972.11, score=18.8]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=103, Expect=6e-22]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [RH, Score=142, Expect=3e-34]} {Smed: dd_Smed_v6_1386_0_1, dd_Smed_v6_1386_0_1, [RH, Score=156, Expect=2e-39]} {RNA1509_10333, RNA1509_36111, RNA1509_47961, RNA1509_57078} {RNA1310_3366.1, RNA1509_36111, RNA1509_47961, RNA1509_57078} {RNA1509_36111, RNA1509_47961, RNA1509_57078, RNA815_6629} |
| 10. | MligTC455_49573 | 617 | 12.86 | Mlig455_022814 | Neo: - Age: - |
CSK | 0.968 | - | - | - | - | - | 0.968 | Mlig455_022814 {REF} {Length: 4126} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=259.6]; Protein kinase domain [PF00069.27, score=122.4]; Transmembrane Fragile-X-F protein [PF10269.11, score=115.8]; SH2 domain [PF00017.26, score=56.9]} {Human: ENSG00000103653, CSK, C-terminal Src kinase, [RH, Score=342, Expect=1e-108]} {Mouse: ENSMUSG00000032312, Csk, c-src tyrosine kinase, [RH, Score=342, Expect=4e-109]} {Dmel: FBgn0262081, Csk, C-terminal Src kinase, [Score=308, Expect=6e-93]} {Celegans: WBGene00000812, csk-1, Tyrosine-protein kinase csk-1, [Score=278, Expect=8e-84]} {Smed: dd_Smed_v6_6039_0_1, dd_Smed_v6_6039_0_1, [Score=289, Expect=2e-88]} {RNA1509_21196} {RNA1310_5299} {RNA815_7127.1} |
| 11. | MligTC455_19855 | 903 | 18.8 | Mlig455_052736 | Neo: - Age: - |
TMEM167B | 0.959 | - | - | - | - | 0.959 | - | Mlig455_052736 {REF} {Length: 816} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=39.2]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [Score=103, Expect=3e-30]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [Score=102, Expect=3e-30]} {Dmel: FBgn0040890, ksh, kish, [Score=42.7, Expect=1e-06]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=100, Expect=9e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=98.6, Expect=7e-29]} {RNA1509_49711, RNA1509_57502} {RNA1310_41303.1, RNA1509_49711, RNA1509_57502} {RNA1509_49711, RNA1509_57502, RNA815_21949} |
| 12. | MligTC455_45987 | 1592 | 33.17 | Mlig455_024379, Mlig455_024495 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.664 Region-specific R8: 3.405 Region-enriched R8: 3.716/0.00000 Regeneration-depleted BL: -2.612 |
PKDREJ | 0.957 | - | - | - | - | - | 0.957 | Mlig455_024379 {REF} {Length: 9101} {Pfam: PKD domain [PF18911.2, score=34.9]; PKD domain [PF00801.22, score=21.5]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58} Mlig455_024495 {REF} {Length: 8484} {Pfam: Polycystin cation channel [PF08016.14, score=333.9]; PLAT/LH2 domain [PF01477.25, score=69.5]; PKD domain [PF18911.2, score=32.8]; Ion transport protein [PF00520.33, score=31.6]; PKD domain [PF00801.22, score=19.8]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [RH, Score=346, Expect=8e-95]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [RH, Score=327, Expect=4e-89]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [RH, Score=319, Expect=7e-87]} {Dmel: FBgn0041195, Pkd2, Polycystic kidney disease 2, [Score=167, Expect=3e-41]} {Celegans: WBGene00004035, pkd-2, Polycystin-2, [Score=198, Expect=3e-52]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=592, Expect=9e-172]} {RNA1509_1257} {RNA1310_126.1} {RNA815_58} |
| 13. | MligTC455_33231 | 33622 | 700.45 | Mlig455_062658 | Neo: - Age: - Region-enriched R7: 1.251/0.01752 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_062658 {REF} {Length: 2031} {RNA1509_246} {RNA1310_41757} {RNA815_21479} | |
| 14. | MligTC455_20243 | 37509 | 781.44 | Mlig455_033274 | Neo: - Age: Down-Down-Up Region-enriched R8: 1.605/0.00415 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_033274 {REF} {Length: 928} {RNA1509_12742, RNA1509_15995, RNA1509_20075, RNA1509_433, RNA1509_53941, RNA1509_6373, RNA1509_6856, RNA1509_694} {RNA1310_78625, RNA1509_12742, RNA1509_15995, RNA1509_20075, RNA1509_433, RNA1509_53941, RNA1509_6373, RNA1509_6856, RNA1509_694} {RNA1509_12742, RNA1509_15995, RNA1509_20075, RNA1509_433, RNA1509_53941, RNA1509_6373, RNA1509_6856, RNA1509_694, RNA815_37938} | |
| 15. | MligTC455_33230 | 33481 | 697.51 | Mlig455_022623, Mlig455_061302 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.463 Region-enriched R7: 1.263/0.01617 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_022623 {REF} {Length: 1193} {NoTransDecoderORF} {RNA1310_117584} Mlig455_061302 {REF} {Length: 655} {RNA1509_713} {RNA1310_75727} {RNA815_17246} |
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| 16. | MligTC455_37645 | 245 | 5.11 | Mlig455_009094 | Neo: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_009094 {REF} {Length: 1970} {RNA1509_21906} {RNA1310_21443.1} {RNA815_8970.1} | |
| 17. | MligTC455_22292 | 74 | 1.54 | Mlig455_067768, Mlig455_067769, Mlig455_067770 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_067768 {REF} {Length: 485} {NoTransDecoderORF} {RNA1509_42337} {RNA1310_43648} {RNA815_26632} Mlig455_067769 {REF} {Length: 1579} {NoTransDecoderORF} {RNA1509_42337} {RNA1310_42816} {RNA815_26632} Mlig455_067770 {REF} {Length: 1583} {RNA1509_42337} {RNA1310_42816} {RNA815_26632} |