TomoSeq data search

Data search

Results for MligTC455_24939

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24939	1310	27.30	Mlig455_026523, Mlig455_026622	Neo: - Age: -	PPP2R3A	Mlig455_026523 {REF} {Length: 3635} {Pfam: EF-hand domain [PF17958.3, score=117.2]; EF-hand domain pair [PF13499.8, score=73.9]; EF hand [PF13202.8, score=24.3]; EF hand [PF00036.34, score=22.3]; EF-hand domain [PF13405.8, score=19.9]} {Human: ENSG00000073711, PPP2R3A, protein phosphatase 2 regulatory subunit B''alpha, [RH, Score=479, Expect=3e-151]; ENSG00000167393, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=471, Expect=5e-155]; ENSG00000273850, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=471, Expect=6e-155]; ENSG00000276438, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=465, Expect=9e-153]} {Mouse: ENSMUSG00000043154, Ppp2r3a, protein phosphatase 2, regulatory subunit B'', alpha, [RH, Score=473, Expect=2e-149]} {Dmel: FBgn0038744, CG4733, [RH, Score=456, Expect=2e-145]} {Celegans: WBGene00018373, F43B10.1, [RH, Score=318, Expect=1e-91]} {Smed: dd_Smed_v6_14696_0_1, dd_Smed_v6_14696_0_1, [RH, Score=453, Expect=1e-147]} {RNA1509_6083} {RNA1310_2997} {RNA815_2584.1} Mlig455_026622 {REF} {Length: 5428} {Pfam: EF-hand domain [PF17958.3, score=116.8]; EF-hand domain pair [PF13499.8, score=24.3]} {Human: ENSG00000073711, PPP2R3A, protein phosphatase 2 regulatory subunit B''alpha, [Score=243, Expect=3e-67]; ENSG00000273850, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [Score=234, Expect=3e-67]; ENSG00000167393, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [Score=234, Expect=2e-67]} {Mouse: ENSMUSG00000043154, Ppp2r3a, protein phosphatase 2, regulatory subunit B'', alpha, [Score=238, Expect=1e-65]} {Dmel: FBgn0038744, CG4733, [Score=224, Expect=6e-62]} {Celegans: WBGene00018373, F43B10.1, [Score=184, Expect=7e-50]} {Smed: dd_Smed_v6_11652_0_1, dd_Smed_v6_11652_0_1, [Score=206, Expect=3e-57]} {RNA1509_6083} {RNA1310_2997} {RNA815_2584.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24939

1310

27.30

Mlig455_026523, Mlig455_026622

Neo: -

Age: -

PPP2R3A

Mlig455_026523 {REF} {Length: 3635} {Pfam: EF-hand domain [PF17958.3, score=117.2]; EF-hand domain pair [PF13499.8, score=73.9]; EF hand [PF13202.8, score=24.3]; EF hand [PF00036.34, score=22.3]; EF-hand domain [PF13405.8, score=19.9]} {Human: ENSG00000073711, PPP2R3A, protein phosphatase 2 regulatory subunit B''alpha, [RH, Score=479, Expect=3e-151]; ENSG00000167393, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=471, Expect=5e-155]; ENSG00000273850, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=471, Expect=6e-155]; ENSG00000276438, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=465, Expect=9e-153]} {Mouse: ENSMUSG00000043154, Ppp2r3a, protein phosphatase 2, regulatory subunit B'', alpha, [RH, Score=473, Expect=2e-149]} {Dmel: FBgn0038744, CG4733, [RH, Score=456, Expect=2e-145]} {Celegans: WBGene00018373, F43B10.1, [RH, Score=318, Expect=1e-91]} {Smed: dd_Smed_v6_14696_0_1, dd_Smed_v6_14696_0_1, [RH, Score=453, Expect=1e-147]} {RNA1509_6083} {RNA1310_2997} {RNA815_2584.1}

Mlig455_026622 {REF} {Length: 5428} {Pfam: EF-hand domain [PF17958.3, score=116.8]; EF-hand domain pair [PF13499.8, score=24.3]} {Human: ENSG00000073711, PPP2R3A, protein phosphatase 2 regulatory subunit B''alpha, [Score=243, Expect=3e-67]; ENSG00000273850, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [Score=234, Expect=3e-67]; ENSG00000167393, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [Score=234, Expect=2e-67]} {Mouse: ENSMUSG00000043154, Ppp2r3a, protein phosphatase 2, regulatory subunit B'', alpha, [Score=238, Expect=1e-65]} {Dmel: FBgn0038744, CG4733, [Score=224, Expect=6e-62]} {Celegans: WBGene00018373, F43B10.1, [Score=184, Expect=7e-50]} {Smed: dd_Smed_v6_11652_0_1, dd_Smed_v6_11652_0_1, [Score=206, Expect=3e-57]} {RNA1509_6083} {RNA1310_2997} {RNA815_2584.1}

Cumulative graph for MligTC455_24939

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.599	5.007	0.10492	0.67959
RegionR2	0.058	5.007	0.90824	1.00000
RegionR3	0.12	5.007	0.79927	1.00000
RegionR4	1.407	5.007	0.01383	0.07775
RegionR5	0.42	5.007	0.36675	0.71942
RegionR6	0.161	5.007	0.73865	1.00000
RegionR7	0.972	5.007	0.06468	0.48873
RegionR8	-0.54	5.007	0.52193	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.871	5.007	0.10220	0.81991
RegenerationR2	0.135	5.007	0.77221	0.98097
RegenerationR3	0.139	5.007	0.77264	0.97247
RegenerationR4	0.157	5.007	0.75826	0.97232
RegenerationR5	0.464	5.007	0.32052	0.74400
RegenerationR6	0.81	5.007	0.10730	0.40537
RegenerationBL	0.686	5.007	0.17873	0.50742
RegenerationTP	0.312	5.007	0.59860	0.96032

Genes with expression patterns similar to MligTC455_24939

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24939	1310	27.3	Mlig455_026523, Mlig455_026622	Neo: - Age: -	PPP2R3A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026523 {REF} {Length: 3635} {Pfam: EF-hand domain [PF17958.3, score=117.2]; EF-hand domain pair [PF13499.8, score=73.9]; EF hand [PF13202.8, score=24.3]; EF hand [PF00036.34, score=22.3]; EF-hand domain [PF13405.8, score=19.9]} {Human: ENSG00000073711, PPP2R3A, protein phosphatase 2 regulatory subunit B''alpha, [RH, Score=479, Expect=3e-151]; ENSG00000167393, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=471, Expect=5e-155]; ENSG00000273850, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=471, Expect=6e-155]; ENSG00000276438, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [RH, Score=465, Expect=9e-153]} {Mouse: ENSMUSG00000043154, Ppp2r3a, protein phosphatase 2, regulatory subunit B'', alpha, [RH, Score=473, Expect=2e-149]} {Dmel: FBgn0038744, CG4733, [RH, Score=456, Expect=2e-145]} {Celegans: WBGene00018373, F43B10.1, [RH, Score=318, Expect=1e-91]} {Smed: dd_Smed_v6_14696_0_1, dd_Smed_v6_14696_0_1, [RH, Score=453, Expect=1e-147]} {RNA1509_6083} {RNA1310_2997} {RNA815_2584.1} Mlig455_026622 {REF} {Length: 5428} {Pfam: EF-hand domain [PF17958.3, score=116.8]; EF-hand domain pair [PF13499.8, score=24.3]} {Human: ENSG00000073711, PPP2R3A, protein phosphatase 2 regulatory subunit B''alpha, [Score=243, Expect=3e-67]; ENSG00000273850, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [Score=234, Expect=3e-67]; ENSG00000167393, PPP2R3B, protein phosphatase 2 regulatory subunit B''beta, [Score=234, Expect=2e-67]} {Mouse: ENSMUSG00000043154, Ppp2r3a, protein phosphatase 2, regulatory subunit B'', alpha, [Score=238, Expect=1e-65]} {Dmel: FBgn0038744, CG4733, [Score=224, Expect=6e-62]} {Celegans: WBGene00018373, F43B10.1, [Score=184, Expect=7e-50]} {Smed: dd_Smed_v6_11652_0_1, dd_Smed_v6_11652_0_1, [Score=206, Expect=3e-57]} {RNA1509_6083} {RNA1310_2997} {RNA815_2584.1}
2.	MligTC455_39280	2391	49.82	Mlig455_061553	Neo: - Age: logFC(26M/2M)=-0.300	GLG1	1.836	-	-	0.883	0.953	-	-	Mlig455_061553 {REF} {Length: 5107} {Pfam: Cysteine rich repeat [PF00839.19, score=394.7]} {Human: ENSG00000090863, GLG1, golgi glycoprotein 1, [RH, Score=628, Expect=0.0]} {Mouse: ENSMUSG00000003316, Glg1, golgi apparatus protein 1, [RH, Score=627, Expect=0.0]} {Dmel: FBgn0264561, Glg1, Golgi complex-localized glycoprotein 1, [RH, Score=432, Expect=5e-132]} {Celegans: WBGene00008800, F14E5.2, Golgi apparatus protein 1 homolog, [RH, Score=469, Expect=2e-145]} {Smed: dd_Smed_v6_1197_0_1, dd_Smed_v6_1197_0_1, [RH, Score=554, Expect=2e-177]} {RNA1509_1590, RNA1509_56328} {RNA1310_1251, RNA1509_56328} {RNA1509_56328, RNA815_364}
3.	MligTC455_32240	735	15.32	Mlig455_042457	Neo: - Age: -	RMND5A	1.675	-	-	-	0.958	-	0.717	Mlig455_042457 {REF} {Length: 1935} {Pfam: CTLH/CRA C-terminal to LisH motif domain [PF10607.11, score=72.1]; RING-type zinc-finger [PF13445.8, score=19.6]} {Human: ENSG00000153561, RMND5A, required for meiotic nuclear division 5 homolog A, [RH, Score=271, Expect=2e-87]} {Mouse: ENSMUSG00000002222, Rmnd5a, required for meiotic nuclear division 5 homolog A, [RH, Score=271, Expect=2e-87]} {Dmel: FBgn0034573, CG3295, [RH, Score=233, Expect=2e-72]} {Celegans: WBGene00020301, T07D1.2, [RH, Score=95.9, Expect=1e-21]} {Smed: dd_Smed_v6_4973_0_1, dd_Smed_v6_4973_0_1, [RH, Score=124, Expect=2e-31]} {RNA1509_31357, RNA1509_6067} {RNA1310_12630, RNA1509_31357} {RNA1509_31357, RNA815_5135}
4.	MligTC455_28135	137	2.85	Mlig455_037259, Mlig455_062385	Neo: - Age: -		0.957	-	-	-	0.957	-	-	Mlig455_037259 {REF} {Length: 337} {NoTransDecoderORF} {RNA1509_26115} {RNA1310_94378} {RNA815_9283.1} Mlig455_062385 {REF} {Length: 930} {NoTransDecoderORF} {RNA1509_25657} {RNA1310_41739} {RNA815_26110}
5.	MligTC455_06472	436	9.09	Mlig455_004292, Mlig455_004367	Neo: - Age: Up-Down-Up Region-enriched R4: 1.429/0.04647		0.955	-	-	-	0.955	-	-	Mlig455_004292 {REF} {Length: 2996} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF00047.27, score=24.0]; Immunoglobulin domain [PF13927.8, score=20.4]} {RNA1509_50458} {RNA1310_23534, RNA1509_50458} {RNA1509_50458, RNA815_16035} Mlig455_004367 {REF} {Length: 3021} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF00047.27, score=24.0]; Immunoglobulin domain [PF13927.8, score=20.4]} {RNA1509_50458} {RNA1310_23534} {RNA815_16035}
6.	MligTC455_34723	441	9.2	Mlig455_051959	Neo: - Age: Up-Down-Down	NIM1K	0.953	0.953	-	-	-	-	-	Mlig455_051959 {REF} {Length: 3455} {Pfam: Protein kinase domain [PF00069.27, score=116.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=56.1]; Kinase-like [PF14531.8, score=18.5]} {Human: ENSG00000177453, NIM1K, NIM1 serine/threonine protein kinase, [Score=240, Expect=1e-76]} {Mouse: ENSMUSG00000095930, Nim1k, NIM1 serine/threonine protein kinase, [Score=241, Expect=4e-77]} {Dmel: FBgn0031299, CG4629, [Score=152, Expect=3e-42]} {Celegans: WBGene00009867, F49C5.4, [Score=182, Expect=8e-54]} {Smed: dd_Smed_v6_15794_0_1, dd_Smed_v6_15794_0_1, [Score=214, Expect=1e-66]} {RNA1509_24864, RNA1509_26319} {RNA1310_21151.1, RNA1509_24864} {RNA1509_24864, RNA815_8109.1}
7.	MligTC455_34992	310	6.45	Mlig455_015774	Neo: - Age: -	ABHD13	0.952	-	-	-	0.952	-	-	Mlig455_015774 {REF} {Length: 2250} {TRANSSPLICED} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=45.9]; alpha/beta hydrolase fold [PF00561.22, score=42.2]; Alpha/beta hydrolase family [PF12697.9, score=32.0]; Acetyl xylan esterase (AXE1) [PF05448.14, score=23.6]; alpha/beta hydrolase fold [PF07859.15, score=19.8]} {Human: ENSG00000139826, ABHD13, abhydrolase domain containing 13, [RH, Score=223, Expect=1e-68]} {Mouse: ENSMUSG00000040396, Abhd13, abhydrolase domain containing 13, [RH, Score=239, Expect=6e-75]} {Dmel: FBgn0025109, Bem46, [RH, Score=219, Expect=2e-67]} {Celegans: WBGene00045192, aho-3, [Score=100, Expect=2e-23]} {Smed: dd_Smed_v6_6717_0_1, dd_Smed_v6_6717_0_1, [RH, Score=247, Expect=3e-78]} {RNA1509_14735} {RNA1310_20836} {RNA815_14136}
8.	MligTC455_49449	811	16.91	Mlig455_002428	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_002428 {REF} {Length: 2170} {RNA1509_13050} {RNA1310_12713, RNA1509_13050} {RNA1509_13050, RNA815_4658.1}
9.	MligTC455_43276	867	18.06	Mlig455_001350	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_001350 {REF} {Length: 1429} {RNA1509_27556} {RNA1310_36036} {RNA815_15620.2}