Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_24966 | 21785 | 453.86 | Mlig455_003712 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.885 Regeneration-downregulated BL: -1.066 Regeneration-depleted BL: -1.066 |
EIF1AY | Mlig455_003712 {REF} {Length: 1962} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=83.0]} {Human: ENSG00000198692, EIF1AY, eukaryotic translation initiation factor 1A Y-linked, [RH, Score=204, Expect=2e-68]; ENSG00000173674, EIF1AX, eukaryotic translation initiation factor 1A X-linked, [RH, Score=204, Expect=2e-68]} {Mouse: ENSMUSG00000067194, Eif1ax, eukaryotic translation initiation factor 1A, X-linked, [RH, Score=204, Expect=1e-68]; ENSMUSG00000057561, Eif1a, eukaryotic translation initiation factor 1A, [RH, Score=203, Expect=7e-68]; ENSMUSG00000113201, Gm21936, predicted gene, 21936, [RH, Score=202, Expect=1e-67]; ENSMUSG00000093847, Gm5039, predicted gene 5039, [RH, Score=202, Expect=2e-67]; ENSMUSG00000113805, Gm5788, predicted pseudogene 5788, [RH, Score=202, Expect=1e-67]; ENSMUSG00000072905, Gm2016, predicted gene 2016, [RH, Score=201, Expect=4e-67]; ENSMUSG00000079029, Gm5662, predicted gene 5662, [RH, Score=200, Expect=7e-67]; ENSMUSG00000079034, Gm8300, predicted gene 8300, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095799, Gm8332, predicted pseudogene 8332, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095717, Gm2056, predicted gene 2056, [RH, Score=199, Expect=3e-66]; ENSMUSG00000096803, Gm6803, predicted gene 6803, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096049, Gm2075, predicted gene 2075, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096619, Gm2035, predicted pseudogene 2035, [RH, Score=195, Expect=1e-64]; ENSMUSG00000113971, Gm2022, predicted pseudogene 2022, [RH, Score=194, Expect=2e-64]} {Dmel: FBgn0026250, eIF1A, eukaryotic translation initiation factor 1A, [RH, Score=217, Expect=2e-73]} {Celegans: WBGene00019162, eif-1.A, Eukaryotic Initiation Factor, [RH, Score=189, Expect=7e-62]} {Smed: dd_Smed_v6_334_0_1, dd_Smed_v6_334_0_1, [RH, Score=225, Expect=2e-76]} {RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1310_31581, RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1509_15613, RNA1509_270, RNA1509_8383, RNA815_13282} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.334 | 8.856 | 0.00004 | 0.01835 | |
RegionR2 | 0.037 | 8.856 | 0.87340 | 1.00000 | |
RegionR3 | 0.167 | 8.856 | 0.41814 | 0.94259 | |
RegionR4 | 0.186 | 8.856 | 0.42969 | 0.75803 | |
RegionR5 | -0.088 | 8.856 | 0.67031 | 1.00000 | |
RegionR6 | 0.405 | 8.856 | 0.04721 | 0.40667 | |
RegionR7 | 0.464 | 8.856 | 0.02142 | 0.27274 | |
RegionR8 | 0.163 | 8.856 | 0.45999 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.368 | 8.856 | 0.34053 | 1.00000 | |
RegenerationR2 | -0.211 | 8.856 | 0.43119 | 0.83459 | |
RegenerationR3 | -0.553 | 8.856 | 0.04271 | 0.36170 | |
RegenerationR4 | -0.175 | 8.856 | 0.53067 | 0.88417 | |
RegenerationR5 | -0.314 | 8.856 | 0.24511 | 0.67815 | |
RegenerationR6 | -0.625 | 8.856 | 0.02123 | 0.18066 | |
RegenerationBL | -1.066 | 8.856 | 0.00002 | 0.00117 | Specific for BL: -1.066 |
RegenerationTP | 0.15 | 8.856 | 0.54485 | 0.92987 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_24966 | 21785 | 453.86 | Mlig455_003712 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.885 Regeneration-downregulated BL: -1.066 Regeneration-depleted BL: -1.066 |
EIF1AY | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003712 {REF} {Length: 1962} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=83.0]} {Human: ENSG00000198692, EIF1AY, eukaryotic translation initiation factor 1A Y-linked, [RH, Score=204, Expect=2e-68]; ENSG00000173674, EIF1AX, eukaryotic translation initiation factor 1A X-linked, [RH, Score=204, Expect=2e-68]} {Mouse: ENSMUSG00000067194, Eif1ax, eukaryotic translation initiation factor 1A, X-linked, [RH, Score=204, Expect=1e-68]; ENSMUSG00000057561, Eif1a, eukaryotic translation initiation factor 1A, [RH, Score=203, Expect=7e-68]; ENSMUSG00000113201, Gm21936, predicted gene, 21936, [RH, Score=202, Expect=1e-67]; ENSMUSG00000093847, Gm5039, predicted gene 5039, [RH, Score=202, Expect=2e-67]; ENSMUSG00000113805, Gm5788, predicted pseudogene 5788, [RH, Score=202, Expect=1e-67]; ENSMUSG00000072905, Gm2016, predicted gene 2016, [RH, Score=201, Expect=4e-67]; ENSMUSG00000079029, Gm5662, predicted gene 5662, [RH, Score=200, Expect=7e-67]; ENSMUSG00000079034, Gm8300, predicted gene 8300, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095799, Gm8332, predicted pseudogene 8332, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095717, Gm2056, predicted gene 2056, [RH, Score=199, Expect=3e-66]; ENSMUSG00000096803, Gm6803, predicted gene 6803, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096049, Gm2075, predicted gene 2075, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096619, Gm2035, predicted pseudogene 2035, [RH, Score=195, Expect=1e-64]; ENSMUSG00000113971, Gm2022, predicted pseudogene 2022, [RH, Score=194, Expect=2e-64]} {Dmel: FBgn0026250, eIF1A, eukaryotic translation initiation factor 1A, [RH, Score=217, Expect=2e-73]} {Celegans: WBGene00019162, eif-1.A, Eukaryotic Initiation Factor, [RH, Score=189, Expect=7e-62]} {Smed: dd_Smed_v6_334_0_1, dd_Smed_v6_334_0_1, [RH, Score=225, Expect=2e-76]} {RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1310_31581, RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1509_15613, RNA1509_270, RNA1509_8383, RNA815_13282} |
2. | MligTC455_38594 | 1170 | 24.37 | Mlig455_010842 | Neo: - Age: Down-Up-Down |
1.719 | - | - | 0.763 | - | - | 0.956 | Mlig455_010842 {REF} {Length: 1254} {RNA1509_50765} {RNA1310_33848} {RNA815_31160} | |
3. | MligTC455_20622 | 1920 | 39.99 | Mlig455_005399 | Neo: - Age: - Regeneration-upregulated TP: 2.098 Regeneration-enriched TP: 2.098 |
1.674 | 0.702 | - | - | - | 0.972 | - | Mlig455_005399 {REF} {Length: 1131} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_12443, RNA1509_3} {RNA1310_14828.1, RNA1509_12443, RNA1509_3} {RNA1509_12443, RNA1509_3, RNA815_44673} | |
4. | MligTC455_33166 | 57 | 1.2 | Mlig455_059521 | Neo: - Age: Down-Up-Down |
0.972 | - | - | - | - | 0.972 | - | Mlig455_059521 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_31268} {RNA1310_8042.1} {RNA815_21467} | |
5. | MligTC455_55577 | 29 | 0.6 | Mlig455_023740 | Neo: - Age: - |
0.972 | - | - | - | - | 0.972 | - | Mlig455_023740 {REF} {Length: 55} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_43082} | |
6. | MligTC455_54055 | 4842 | 100.87 | Mlig455_036551, Mlig455_057816 | Neo: - Age: Down-Down-Up Region-enriched R7: 1.124/0.01609 Regeneration-downregulated BL: -2.493 Regeneration-depleted BL: -2.493 |
0.966 | - | - | - | - | 0.966 | - | Mlig455_036551 {REF} {Length: 741} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457} Mlig455_057816 {REF} {Length: 624} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457} |
|
7. | MligTC455_15672 | 59 | 1.23 | Mlig455_049330 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_049330 {REF} {Length: 766} {RNA1509_2125} {RNA1310_5057.1} {RNA815_436} | |
8. | MligTC455_07421 | 19136 | 398.66 | Mlig455_029662 | Neo: - Age: Down-Up-Up Region-specific R8: 3.646 Region-enriched R8: 3.196/0.00000 |
SLC25A24 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_029662 {REF} {Length: 528} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=52.9]; EF hand [PF13202.8, score=51.2]; EF-hand domain pair [PF13499.8, score=51.0]; EF-hand domain [PF13405.8, score=41.8]; EF-hand domain pair [PF13833.8, score=41.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.1]; Family of unknown function (DUF5766) [PF19070.2, score=19.0]} {Human: ENSG00000085491, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000284468, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000114854, TNNC1, troponin C1, slow skeletal and cardiac type, [Score=48.1, Expect=6e-08]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=48.5, Expect=3e-08]; ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [Score=46.2, Expect=4e-07]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [Score=47.0, Expect=1e-07]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=45.4, Expect=3e-07]} {RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1310_66965, RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1509_10992, RNA1509_2519, RNA1509_679, RNA815_31569.1} |
9. | MligTC455_27348 | 14734 | 306.95 | Mlig455_034670, Mlig455_034672 | Neo: - Age: Up-Down-Down Region-enriched R8: 2.406/0.03361 |
ANK1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_034670 {REF} {Length: 12517} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=273.4]; Ankyrin repeat [PF00023.32, score=216.6]; Ankyrin repeats (many copies) [PF13637.8, score=210.5]; Ankyrin repeat [PF13606.8, score=179.8]; Ankyrin repeats (many copies) [PF13857.8, score=150.1]; Mab-21 protein [PF03281.16, score=22.4]; PEGA domain [PF08308.13, score=18.6]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=252, Expect=2e-68]; ENSG00000151150, ANK3, ankyrin 3, [Score=245, Expect=3e-66]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=246, Expect=1e-66]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=243, Expect=1e-65]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=234, Expect=4e-63]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=248, Expect=3e-67]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=229, Expect=2e-61]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=243, Expect=2e-67]} {RNA1509_25730} {RNA1310_2249.2} {RNA815_11470.1} Mlig455_034672 {REF} {Length: 829} {RNA1509_40299, RNA1509_5063} {RNA1310_76724, RNA1509_40299} {RNA1509_40299, RNA815_2813.2} |
10. | MligTC455_35617 | 108 | 2.24 | Mlig455_048363 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_048363 {REF} {Length: 5379} {RNA1310_66856} | |
11. | MligTC455_53752 | 13 | 0.28 | Mlig455_012021 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_012021 {REF} {Length: 532} {NoTransDecoderORF} | |
12. | MligTC455_30279 | 171 | 3.57 | Mlig455_003682, Mlig455_026254, Mlig455_034156, Mlig455_071093 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_003682 {REF} {Length: 1016} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.5]} {Celegans: WBGene00016348, C33E10.6, [Score=126, Expect=6e-32]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=117, Expect=4e-29]} {RNA1509_43415} {RNA1310_554.1} {RNA815_1342.1} Mlig455_026254 {REF} {Length: 1016} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.5]} {Celegans: WBGene00016348, C33E10.6, [Score=124, Expect=2e-31]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=117, Expect=4e-29]} {RNA1509_43415} {RNA1310_554.1} {RNA815_1342.1} Mlig455_034156 {REF} {Length: 1012} {Pfam: Recombination endonuclease VII [PF02945.17, score=33.1]; DNA polymerase type B, organellar and viral [PF03175.15, score=26.5]} {Celegans: WBGene00016348, C33E10.6, [Score=119, Expect=2e-30]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=107, Expect=1e-26]} {RNA1509_43415} {RNA1310_554.1, RNA1509_43415} {RNA1509_43415, RNA815_1342.1} Mlig455_071093 {REF} {Length: 1019} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.0]} {Celegans: WBGene00016348, C33E10.6, [Score=66.2, Expect=3e-13]} {Smed: dd_Smed_v6_3574_2_45, dd_Smed_v6_3574_2_45, [Score=77.0, Expect=4e-19]} {RNA1509_43415} {RNA1310_554.1} {RNA815_1342.1} |
|
13. | MligTC455_07907 | 22 | 0.47 | Mlig455_049930 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_049930 {REF} {Length: 526} {NoTransDecoderORF} | |
14. | MligTC455_54301 | 10407 | 216.81 | Mlig455_061141 | Neo: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_061141 {REF} {Length: 896} {RNA1509_4003} {RNA1310_87474} {RNA815_2608.1} | |
15. | MligTC455_11734 | 31 | 0.65 | Mlig455_000696 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_000696 {REF} {Length: 217} {NoTransDecoderORF} {RNA1509_37388} {RNA1310_340.1} {RNA815_14498.2} | |
16. | MligTC455_28999 | 610 | 12.71 | Mlig455_007005 | Neo: - Age: - Region-enriched R2: 3.115/0.00304 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_007005 {REF} {Length: 4082} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=23.6]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=21.0]} {RNA1509_29353} {RNA1310_22648} {RNA815_21225} | |
17. | MligTC455_39272 | 13 | 0.27 | Mlig455_024681, Mlig455_044063 | Neo: - |
PKD2L1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_024681 {REF} {Length: 2918} {Pfam: Polycystin cation channel [PF08016.14, score=213.0]; Ion transport protein [PF00520.33, score=33.2]} {Human: ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=128, Expect=5e-30]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=136, Expect=3e-32]; ENSMUSG00000037578, Pkd2l1, polycystic kidney disease 2-like 1, [Score=130, Expect=1e-30]} {Dmel: FBgn0036712, brv2, brivido-2, [Score=58.9, Expect=1e-08]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=111, Expect=9e-25]} {Smed: dd_Smed_v6_12955_0_1, dd_Smed_v6_12955_0_1, [Score=150, Expect=2e-37]} {RNA1509_14205} {RNA1310_796} {RNA815_8353} Mlig455_044063 {REF} {Length: 13126} {Pfam: Polycystin cation channel [PF08016.14, score=215.1]; REJ domain [PF02010.17, score=149.1]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=56.4]; PLAT/LH2 domain [PF01477.25, score=52.3]; Ion transport protein [PF00520.33, score=30.4]} {Human: ENSG00000107593, PKD2L1, polycystin 2 like 1, transient receptor potential cation channel, [Score=132, Expect=5e-30]; ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [Score=130, Expect=5e-29]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=144, Expect=2e-33]} {Dmel: FBgn0087011, CG41520, [Score=63.5, Expect=3e-09]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=120, Expect=2e-26]} {Smed: dd_Smed_v6_12955_0_1, dd_Smed_v6_12955_0_1, [Score=154, Expect=9e-38]} {RNA1509_14205} {RNA1310_796} {RNA815_8353} |
18. | MligTC455_02029 | 225 | 4.69 | Mlig455_009955 | Neo: - Age: logFC(26M/2M)=-0.627 Region-enriched R7: 6.602/0.00000 Regeneration-depleted BL: -8.104 |
TNN | 0.952 | - | - | - | - | 0.952 | - | Mlig455_009955 {REF} {Length: 3815} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=101.0]} {Human: ENSG00000120332, TNN, tenascin N, [Score=92.0, Expect=6e-21]; ENSG00000168477, TNXB, tenascin XB, [Score=92.0, Expect=7e-21]; ENSG00000229353, TNXB, tenascin XB, [Score=92.0, Expect=7e-21]; ENSG00000231608, TNXB, tenascin XB, [Score=90.9, Expect=2e-20]; ENSG00000233323, TNXB, tenascin XB, [Score=90.9, Expect=2e-20]; ENSG00000236236, TNXB, tenascin XB, [Score=88.2, Expect=1e-19]; ENSG00000206258, TNXB, tenascin XB, [Score=87.4, Expect=3e-19]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.4, Expect=3e-21]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=89.7, Expect=3e-20]} {Dmel: FBgn0051832, CG31832, [Score=95.9, Expect=4e-24]} {Celegans: WBGene00020516, T15B7.1, [Score=62.4, Expect=2e-11]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=72.8, Expect=6e-15]} {RNA1509_2515} {RNA1310_28603.1} {RNA815_21059} |
19. | MligTC455_30250 | 292 | 6.09 | Mlig455_066355 | Neo: - Age: Up-Down-Down |
0.952 | - | - | - | - | 0.952 | - | Mlig455_066355 {REF} {Length: 1695} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_614.1} {RNA815_33502.1} | |
20. | MligTC455_37837 | 39 | 0.81 | Mlig455_060764 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_060764 {REF} {Length: 489} {NoTransDecoderORF} {RNA1310_49408} {RNA815_26583} | |
21. | MligTC455_52401 | 60 | 1.24 | Mlig455_048612 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_048612 {REF} {Length: 856} {RNA1310_39954.1} {RNA815_19596} | |
22. | MligTC455_27349 | 21427 | 446.4 | Mlig455_034721 | Neo: - Age: logFC(26M/2M)=-0.561 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_034721 {REF} {Length: 925} {RNA1509_5063} {RNA1310_76724, RNA1509_5063} {RNA1509_5063, RNA815_2813.2} | |
23. | MligTC455_34835 | 16 | 0.33 | Mlig455_032470 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_032470 {REF} {Length: 2217} {RNA1509_9737} {RNA1310_23039} {RNA815_9284} |