Data search
Results for MligTC455_30250
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30250 | 292 | 6.09 | Mlig455_066355 | Neo: - Age: Up-Down-Down |
Mlig455_066355 {REF} {Length: 1695} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_614.1} {RNA815_33502.1} |
Cumulative graph for MligTC455_30250
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.429 | 2.649 | 0.23053 | 0.87424 | |
| RegionR2 | -0.627 | 2.649 | 0.97121 | 1.00000 | |
| RegionR3 | 0.108 | 2.649 | 0.83803 | 1.00000 | |
| RegionR4 | 1.522 | 2.649 | 0.22576 | 0.51752 | |
| RegionR5 | 1.134 | 2.649 | 0.29102 | 0.62254 | |
| RegionR6 | 0.74 | 2.649 | 0.52431 | 1.00000 | |
| RegionR7 | 0.781 | 2.649 | 0.56179 | 1.00000 | |
| RegionR8 | 1.772 | 2.649 | 0.24491 | 0.86192 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.648 | 2.649 | 0.12534 | 0.85592 | |
| RegenerationR2 | 1.022 | 2.649 | 0.21264 | 0.65967 | |
| RegenerationR3 | 1.021 | 2.649 | 0.26094 | 0.69578 | |
| RegenerationR4 | 0.869 | 2.649 | 0.33233 | 0.76607 | |
| RegenerationR5 | 1.314 | 2.649 | 0.12750 | 0.53166 | |
| RegenerationR6 | 0.487 | 2.649 | 0.62410 | 0.88346 | |
| RegenerationBL | 1.2 | 2.649 | 0.17990 | 0.50897 | |
| RegenerationTP | 1.415 | 2.649 | 0.15040 | 0.57464 |
Genes with expression patterns similar to MligTC455_30250
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30250 | 292 | 6.09 | Mlig455_066355 | Neo: - Age: Up-Down-Down |
5 | 1.000 | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066355 {REF} {Length: 1695} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_614.1} {RNA815_33502.1} | |
| 2. | MligTC455_30248 | 265 | 5.52 | Mlig455_041172, Mlig455_066354 | Neo: - Age: Down-Down-Down |
2.572 | - | - | - | 0.822 | 0.800 | 0.950 | Mlig455_041172 {REF} {Length: 785} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_32948} {RNA815_33502.1} Mlig455_066354 {REF} {Length: 594} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_32948} {RNA815_33502.1} |
|
| 3. | MligTC455_27599 | 231525 | 4823.42 | Mlig455_063228, Mlig455_067361 | Neo: - Age: Down-Down-Up Region-enriched R8: 1.552/0.00626 |
1.727 | - | - | - | 0.776 | 0.951 | - | Mlig455_063228 {REF} {Length: 829} {RNA1509_24892, RNA1509_26984, RNA1509_42125, RNA1509_57} {RNA1310_63405, RNA1509_24892, RNA1509_26984, RNA1509_42125, RNA1509_57} {RNA1509_24892, RNA1509_26984, RNA1509_42125, RNA1509_57, RNA815_23391} Mlig455_067361 {REF} {Length: 827} {RNA1509_24892, RNA1509_33982, RNA1509_50} {RNA1310_63405, RNA1509_33982, RNA1509_50} {RNA1509_33982, RNA1509_50, RNA815_23391} |
|
| 4. | MligTC455_27349 | 21427 | 446.4 | Mlig455_034721 | Neo: - Age: logFC(26M/2M)=-0.561 |
0.969 | - | - | - | - | 0.969 | - | Mlig455_034721 {REF} {Length: 925} {RNA1509_5063} {RNA1310_76724, RNA1509_5063} {RNA1509_5063, RNA815_2813.2} | |
| 5. | MligTC455_33166 | 57 | 1.2 | Mlig455_059521 | Neo: - Age: Down-Up-Down |
0.965 | - | - | - | - | 0.965 | - | Mlig455_059521 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_31268} {RNA1310_8042.1} {RNA815_21467} | |
| 6. | MligTC455_54055 | 4842 | 100.87 | Mlig455_036551, Mlig455_057816 | Neo: - Age: Down-Down-Up Region-enriched R7: 1.124/0.01609 Regeneration-downregulated BL: -2.493 Regeneration-depleted BL: -2.493 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_036551 {REF} {Length: 741} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457} Mlig455_057816 {REF} {Length: 624} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457} |
|
| 7. | MligTC455_07421 | 19136 | 398.66 | Mlig455_029662 | Neo: - Age: Down-Up-Up Region-specific R8: 3.646 Region-enriched R8: 3.196/0.00000 |
SLC25A24 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_029662 {REF} {Length: 528} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=52.9]; EF hand [PF13202.8, score=51.2]; EF-hand domain pair [PF13499.8, score=51.0]; EF-hand domain [PF13405.8, score=41.8]; EF-hand domain pair [PF13833.8, score=41.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.1]; Family of unknown function (DUF5766) [PF19070.2, score=19.0]} {Human: ENSG00000085491, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000284468, SLC25A24, solute carrier family 25 member 24, [Score=48.9, Expect=5e-08]; ENSG00000114854, TNNC1, troponin C1, slow skeletal and cardiac type, [Score=48.1, Expect=6e-08]} {Mouse: ENSMUSG00000091898, Tnnc1, troponin C, cardiac/slow skeletal, [Score=48.5, Expect=3e-08]; ENSMUSG00000057738, Sptan1, spectrin alpha, non-erythrocytic 1, [Score=46.2, Expect=4e-07]} {Dmel: FBgn0250789, alpha-Spec, alpha Spectrin, [Score=47.0, Expect=1e-07]} {Smed: dd_Smed_v6_11874_0_1, dd_Smed_v6_11874_0_1, [Score=45.4, Expect=3e-07]} {RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1310_66965, RNA1509_10992, RNA1509_2519, RNA1509_679} {RNA1509_10992, RNA1509_2519, RNA1509_679, RNA815_31569.1} |
| 8. | Mlig999023.1 | 0.957 | - | - | - | - | 0.957 | - | ||||||
| 9. | MligTC455_52401 | 60 | 1.24 | Mlig455_048612 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_048612 {REF} {Length: 856} {RNA1310_39954.1} {RNA815_19596} | |
| 10. | MligTC455_39207 | 161 | 3.36 | Mlig455_043588 | Neo: - Age: logFC(26M/2M)=-0.502 |
DCHS1 | 0.955 | 0.955 | - | - | - | - | - | Mlig455_043588 {REF} {Length: 8241} {Pfam: Cadherin domain [PF00028.19, score=487.6]; Cadherin-like [PF08266.14, score=41.6]; Cadherin-like [PF16184.7, score=29.4]; RET Cadherin like domain 1 [PF17756.3, score=27.8]} {Human: ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=391, Expect=4e-110]; ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=375, Expect=5e-105]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=380, Expect=1e-106]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=378, Expect=3e-106]} {Dmel: FBgn0284247, ds, dachsous, [Score=418, Expect=3e-119]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=201, Expect=1e-51]} {Smed: dd_Smed_v6_11744_0_1, dd_Smed_v6_11744_0_1, [Score=179, Expect=5e-45]} {RNA1509_5448} {RNA1310_281} {RNA815_2365} |
| 11. | MligTC455_13972 | 42 | 0.87 | Mlig455_058440 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_058440 {REF} {Length: 189} {NoTransDecoderORF} | |
| 12. | MligTC455_24966 | 21785 | 453.86 | Mlig455_003712 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.885 Regeneration-downregulated BL: -1.066 Regeneration-depleted BL: -1.066 |
EIF1AY | 0.952 | - | - | - | - | 0.952 | - | Mlig455_003712 {REF} {Length: 1962} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=83.0]} {Human: ENSG00000198692, EIF1AY, eukaryotic translation initiation factor 1A Y-linked, [RH, Score=204, Expect=2e-68]; ENSG00000173674, EIF1AX, eukaryotic translation initiation factor 1A X-linked, [RH, Score=204, Expect=2e-68]} {Mouse: ENSMUSG00000067194, Eif1ax, eukaryotic translation initiation factor 1A, X-linked, [RH, Score=204, Expect=1e-68]; ENSMUSG00000057561, Eif1a, eukaryotic translation initiation factor 1A, [RH, Score=203, Expect=7e-68]; ENSMUSG00000113201, Gm21936, predicted gene, 21936, [RH, Score=202, Expect=1e-67]; ENSMUSG00000093847, Gm5039, predicted gene 5039, [RH, Score=202, Expect=2e-67]; ENSMUSG00000113805, Gm5788, predicted pseudogene 5788, [RH, Score=202, Expect=1e-67]; ENSMUSG00000072905, Gm2016, predicted gene 2016, [RH, Score=201, Expect=4e-67]; ENSMUSG00000079029, Gm5662, predicted gene 5662, [RH, Score=200, Expect=7e-67]; ENSMUSG00000079034, Gm8300, predicted gene 8300, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095799, Gm8332, predicted pseudogene 8332, [RH, Score=200, Expect=9e-67]; ENSMUSG00000095717, Gm2056, predicted gene 2056, [RH, Score=199, Expect=3e-66]; ENSMUSG00000096803, Gm6803, predicted gene 6803, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096049, Gm2075, predicted gene 2075, [RH, Score=196, Expect=5e-65]; ENSMUSG00000096619, Gm2035, predicted pseudogene 2035, [RH, Score=195, Expect=1e-64]; ENSMUSG00000113971, Gm2022, predicted pseudogene 2022, [RH, Score=194, Expect=2e-64]} {Dmel: FBgn0026250, eIF1A, eukaryotic translation initiation factor 1A, [RH, Score=217, Expect=2e-73]} {Celegans: WBGene00019162, eif-1.A, Eukaryotic Initiation Factor, [RH, Score=189, Expect=7e-62]} {Smed: dd_Smed_v6_334_0_1, dd_Smed_v6_334_0_1, [RH, Score=225, Expect=2e-76]} {RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1310_31581, RNA1509_15613, RNA1509_270, RNA1509_8383} {RNA1509_15613, RNA1509_270, RNA1509_8383, RNA815_13282} |
| 13. | MligTC455_48402 | 634 | 13.21 | Mlig455_030570 | Neo: - Age: - |
GNG7 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_030570 {REF} {Length: 3661} {Pfam: GGL domain [PF00631.24, score=54.6]} {Human: ENSG00000176533, GNG7, G protein subunit gamma 7, [RH, Score=61.6, Expect=4e-14]} {Mouse: ENSMUSG00000048240, Gng7, guanine nucleotide binding protein (G protein), gamma 7, [RH, Score=59.7, Expect=2e-13]; ENSMUSG00000036402, Gng12, guanine nucleotide binding protein (G protein), gamma 12, [RH, Score=58.5, Expect=4e-13]} {Dmel: FBgn0004921, Ggamma1, G protein gamma 1, [RH, Score=68.2, Expect=5e-17]} {Celegans: WBGene00001681, gpc-1, Guanine nucleotide-binding protein subunit gamma, [Score=50.8, Expect=2e-10]} {Smed: dd_Smed_v6_1237_0_1, dd_Smed_v6_1237_0_1, [Score=68.6, Expect=2e-17]} {RNA1509_51198, RNA1509_55683} {RNA1310_34893, RNA1509_51198, RNA1509_55683} {RNA1509_51198, RNA1509_55683, RNA815_16453.1} |
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