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Results for MligTC455_25029

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25029 26 0.54 Mlig455_061269

Neo: -

Age: -

 RFC3 Mlig455_061269 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; AAA ATPase domain [PF13191.8, score=26.1]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=7e-176]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=499, Expect=4e-178]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=481, Expect=3e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=5e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=447, Expect=4e-158]} {RNA1509_12650} {RNA1310_19461.1} {RNA815_9346}

Cumulative graph for MligTC455_25029

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.674 0.987 0.99997 1.00000
RegionR2 -0.792 0.987 0.99993 1.00000
RegionR3 -0.501 0.987 0.99996 1.00000
RegionR4 0.85 0.987 1.00000 1.00000
RegionR5 -0.286 0.987 0.99995 1.00000
RegionR6 -0.472 0.987 0.99998 1.00000
RegionR7 -0.234 0.987 1.00000 1.00000
RegionR8 -0.238 0.987 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.69 0.987 0.99999 1.00000
RegenerationR2 2.085 0.987 0.16232 0.59953
RegenerationR3 4.17 0.987 0.03073 0.31385
RegenerationR4 3.404 0.987 0.04672 0.34923
RegenerationR5 4.457 0.987 0.00455 0.12210
RegenerationR6 4.181 0.987 0.03583 0.23706
RegenerationBL 0.275 0.987 0.99999 1.00000
RegenerationTP 3.424 0.987 0.23428 0.68015


Genes with expression patterns similar to MligTC455_25029

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25029 26 0.54 Mlig455_061269

Neo: -

Age: -

 RFC3 3 - - - 1.000 1.000 1.000 Mlig455_061269 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; AAA ATPase domain [PF13191.8, score=26.1]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=7e-176]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=499, Expect=4e-178]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=481, Expect=3e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=5e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=447, Expect=4e-158]} {RNA1509_12650} {RNA1310_19461.1} {RNA815_9346}
2. MligTC455_15365 15 0.3 Mlig455_060332

Neo: -

Age: -

 1.837 - - - 0.973 0.864 - Mlig455_060332 {REF} {Length: 978} {RNA1310_84789}
3. MligTC455_51087 29 0.6 Mlig455_057838

Neo: -

Age: -

 0.989 - - - 0.989 - - Mlig455_057838 {REF} {Length: 1771} {Pfam: Transcriptional regulator [PF01709.22, score=117.4]} {Celegans: WBGene00021757, taco-1, Translational Activator of Cytochrome c Oxidase, [RH, Score=78.2, Expect=1e-16]} {Smed: dd_Smed_v6_2722_0_1, dd_Smed_v6_2722_0_1, [RH, Score=118, Expect=2e-31]} {RNA1509_54641} {RNA1310_11469} {RNA815_7775}
4. MligTC455_38225 21 0.44 Mlig455_048908

Neo: Int S/G2/M

Age: Up-Down-Down

 0.988 - - - - 0.988 - Mlig455_048908 {REF} {Length: 4899} {Pfam: Receptor family ligand binding region [PF01094.30, score=18.5]} {RNA1509_5478} {RNA1310_1978} {RNA815_545}
5. MligTC455_09017 12 0.24 Mlig455_014487, Mlig455_014508

Neo: -

Age: -

 FYN 0.974 - - - - 0.974 -

Mlig455_014487 {REF} {Length: 2444} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.6]; Protein kinase domain [PF00069.27, score=148.1]; SH2 domain [PF00017.26, score=77.9]; Variant SH3 domain [PF14604.8, score=40.1]; SH3 domain [PF00018.30, score=37.3]; Variant SH3 domain [PF07653.19, score=28.1]; Haspin like kinase domain [PF12330.10, score=24.7]; ABC1 atypical kinase-like domain [PF03109.18, score=20.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.9]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=525, Expect=5e-180]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [RH, Score=499, Expect=8e-170]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=526, Expect=1e-180]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=488, Expect=3e-166]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=482, Expect=1e-163]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=532, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_32391}

Mlig455_014508 {REF} {Length: 2263} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.9]; Protein kinase domain [PF00069.27, score=148.2]; SH2 domain [PF00017.26, score=76.1]; Variant SH3 domain [PF14604.8, score=40.2]; SH3 domain [PF00018.30, score=37.5]; Variant SH3 domain [PF07653.19, score=28.4]; Haspin like kinase domain [PF12330.10, score=22.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.6]; ABC1 atypical kinase-like domain [PF03109.18, score=21.2]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=523, Expect=0.0]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=524, Expect=0.0]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=490, Expect=8e-169]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=479, Expect=1e-164]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_46373}
6. MligTC455_11042 103 2.15 Mlig455_050306

Neo: Int S/G2/M

Age: -

 0.973 - - - - 0.973 - Mlig455_050306 {REF} {Length: 849} {NoTransDecoderORF} {RNA1310_65300} {RNA815_27023}
7. MligTC455_12268 21 0.44 Mlig455_020458

Neo: -

Age: -

 0.973 - - - 0.973 - - Mlig455_020458 {REF} {Length: 1693} {Pfam: TATA element modulatory factor 1 DNA binding [PF12329.10, score=20.4]} {RNA1509_10012, RNA1509_37655} {RNA1310_23404.1, RNA1509_10012, RNA1509_37655} {RNA1509_10012, RNA1509_37655, RNA815_8343.1}
8. MligTC455_10200 114 2.38 Mlig455_060035

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_060035 {REF} {Length: 4892} {RNA1509_29378, RNA1509_41981} {RNA1310_4852.2, RNA1509_41981} {RNA1509_41981, RNA815_14079}
9. MligTC455_39814 17 0.35 Mlig455_051814

Neo: -

Age: -

 0.97 - - - 0.970 - - Mlig455_051814 {REF} {Length: 1986} {NoTransDecoderORF} {RNA1310_67241} {RNA815_26250.1}
10. MligTC455_31381 87 1.81 Mlig455_034975, Mlig455_053710

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=4.497

 HSP90AA1 0.967 - - - - 0.967 -

Mlig455_034975 {REF} {Length: 2826} {Pfam: Hsp90 protein [PF00183.20, score=753.4]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=52.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.0]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90 alpha family class A member 1, [RH, Score=1065, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90 alpha family class B member 1, [RH, Score=1040, Expect=0.0]} {Mouse: ENSMUSG00000021270, Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1, [RH, Score=1079, Expect=0.0]; ENSMUSG00000023944, Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1, [RH, Score=1043, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=1093, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Heat shock protein 90, [RH, Score=1017, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, dd_Smed_v6_56_0_2, [RH, Score=1125, Expect=0.0]} {RNA1509_125} {RNA1310_6914.1} {RNA815_2025.1}

Mlig455_053710 {REF} {Length: 2826} {Pfam: Hsp90 protein [PF00183.20, score=753.4]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=52.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=39.0]} {Human: ENSG00000080824, HSP90AA1, heat shock protein 90 alpha family class A member 1, [RH, Score=1065, Expect=0.0]; ENSG00000096384, HSP90AB1, heat shock protein 90 alpha family class B member 1, [RH, Score=1040, Expect=0.0]} {Mouse: ENSMUSG00000021270, Hsp90aa1, heat shock protein 90, alpha (cytosolic), class A member 1, [RH, Score=1079, Expect=0.0]; ENSMUSG00000023944, Hsp90ab1, heat shock protein 90 alpha (cytosolic), class B member 1, [RH, Score=1043, Expect=0.0]} {Dmel: FBgn0001233, Hsp83, Heat shock protein 83, [RH, Score=1093, Expect=0.0]} {Celegans: WBGene00000915, daf-21, Heat shock protein 90, [RH, Score=1017, Expect=0.0]} {Smed: dd_Smed_v6_56_0_2, dd_Smed_v6_56_0_2, [RH, Score=1125, Expect=0.0]} {RNA1509_125} {RNA1310_6914.1} {RNA815_2025.1}
11. MligTC455_36359 15 0.32 Mlig455_051571

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_051571 {REF} {Length: 1748} {RNA1509_52167} {RNA1310_8256.2} {RNA815_11050}
12. MligTC455_15304 8 0.16 Mlig455_030726

Neo: -

Age: -

 ADAT3 0.964 - - - - 0.964 - Mlig455_030726 {REF} {Length: 2560} {TRANSSPLICED} {Pfam: Cytidine and deoxycytidylate deaminase zinc-binding region [PF00383.25, score=28.8]; MafB19-like deaminase [PF14437.8, score=20.2]} {Human: ENSG00000213638, ADAT3, adenosine deaminase, tRNA specific 3, [Score=53.5, Expect=8e-07]} {Mouse: ENSMUSG00000113640, Adat3, adenosine deaminase, tRNA-specific 3, [Score=51.6, Expect=2e-06]; ENSMUSG00000035370, Gm49322, predicted gene, 49322, [Score=51.6, Expect=2e-06]} {Dmel: FBgn0034360, CG10927, [Score=52.0, Expect=1e-06]} {Celegans: WBGene00012927, Y47D3A.14, [Score=48.9, Expect=7e-06]} {Smed: dd_Smed_v6_9268_0_1, dd_Smed_v6_9268_0_1, [Score=115, Expect=3e-28]} {RNA1509_59331} {RNA1310_28342} {RNA815_12542}
13. MligTC455_15560 26 0.53 Mlig455_067953

Neo: Irradiation

Age: logFC(26M/2M)=0.383

 0.964 - - - - 0.964 - Mlig455_067953 {REF} {Length: 2539} {RNA1509_37382} {RNA1310_14412.2} {RNA815_19215}
14. MligTC455_41766 211 4.4 Mlig455_030429, Mlig455_030463, Mlig455_030466

Neo: -

Age: -

 ZNF768 0.964 - - - - 0.964 -

Mlig455_030429 {REF} {Length: 2939} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=66.3]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=50.4]; Zinc finger, C2H2 type [PF00096.28, score=47.2]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.3]; Zinc-finger double domain [PF13465.8, score=20.3]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=80.9, Expect=1e-15]} {Mouse: ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=85.1, Expect=3e-17]} {Dmel: FBgn0020309, crol, crooked legs, [Score=71.2, Expect=8e-13]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=47.8, Expect=5e-06]} {RNA1509_25496} {RNA1310_18575} {RNA815_53687}

Mlig455_030463 {REF} {Length: 2773} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=32.7]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=32.5]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=51.6, Expect=1e-06]; ENSG00000154957, ZNF18, zinc finger protein 18, [Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000018347, Zkscan6, zinc finger with KRAB and SCAN domains 6, [Score=53.5, Expect=3e-07]; ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=52.0, Expect=8e-07]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=49.3, Expect=1e-06]} {RNA1509_25496, RNA1509_31651} {RNA1310_18575, RNA1509_31651} {RNA1509_31651, RNA815_53687}

Mlig455_030466 {REF} {Length: 2741} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=66.0]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=50.9]; Zinc finger, C2H2 type [PF00096.28, score=47.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; Zinc-finger double domain [PF13465.8, score=20.3]} {Human: ENSG00000169957, ZNF768, zinc finger protein 768, [Score=81.3, Expect=8e-16]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=77.8, Expect=1e-14]} {Mouse: ENSMUSG00000047371, Zfp768, zinc finger protein 768, [Score=85.5, Expect=3e-17]} {Dmel: FBgn0020309, crol, crooked legs, [Score=70.9, Expect=1e-12]} {Smed: dd_Smed_v6_48354_0_1, dd_Smed_v6_48354_0_1, [Score=48.9, Expect=2e-06]} {RNA1509_25496} {RNA1310_18575, RNA1509_25496} {RNA1509_25496, RNA815_53687}
15. MligTC455_20392 28 0.59 Mlig455_020400

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_020400 {REF} {Length: 1475} {Pfam: Homeodomain-like domain [PF13384.8, score=25.9]; Helix-turn-helix domain [PF13518.8, score=24.2]} {RNA1509_28798} {RNA1310_89189} {RNA815_14917.2}
16. MligTC455_38723 909 18.93 Mlig455_045064

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.453

 PANK4 0.957 - - - 0.957 - - Mlig455_045064 {REF} {Length: 1568} {Pfam: Fumble [PF03630.16, score=135.4]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=106, Expect=3e-24]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=106, Expect=3e-24]} {Mouse: ENSMUSG00000018846, Pank3, pantothenate kinase 3, [Score=79.0, Expect=7e-16]; ENSMUSG00000033610, Pank1, pantothenate kinase 1, [Score=77.8, Expect=2e-15]} {Dmel: FBgn0011205, fbl, fumble, [Score=90.5, Expect=4e-20]} {Smed: dd_Smed_v6_2075_0_1, dd_Smed_v6_2075_0_1, [RH, Score=230, Expect=1e-72]} {RNA1509_29195, RNA1509_51737} {RNA1310_44453, RNA1509_29195, RNA1509_51737} {RNA1509_29195, RNA1509_51737, RNA815_9614}
17. MligTC455_34822 27 0.56 Mlig455_041526

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_041526 {REF} {Length: 3806} {NoTransDecoderORF} {RNA1509_49844} {RNA1310_100437} {RNA815_25765}
18. MligTC455_25772 151 3.15 Mlig455_067364

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_067364 {REF} {Length: 3815} {RNA1509_5822} {RNA1310_3594} {RNA815_4411}
19. MligTC455_49839 49 1.01 Mlig455_040045

Neo: -

Age: -

Region-enriched R4: 5.177/0.02439

 PICALM 0.95 - - - - 0.950 - Mlig455_040045 {REF} {Length: 4051} {Pfam: ANTH domain [PF07651.18, score=189.5]; ENTH domain [PF01417.22, score=30.7]} {Human: ENSG00000073921, PICALM, phosphatidylinositol binding clathrin assembly protein, [RH, Score=339, Expect=2e-109]} {Mouse: ENSMUSG00000039361, Picalm, phosphatidylinositol binding clathrin assembly protein, [Score=345, Expect=3e-111]} {Dmel: FBgn0086372, lap, like-AP180, [Score=333, Expect=6e-106]} {Celegans: WBGene00006751, unc-11, Phosphatidylinositol-binding clathrin assembly protein unc-11, [Score=298, Expect=1e-93]} {Smed: dd_Smed_v6_1463_0_1, dd_Smed_v6_1463_0_1, [Score=333, Expect=2e-106]} {RNA1509_12591, RNA1509_43204} {RNA1310_7958.1, RNA1509_43204} {RNA1509_43204, RNA815_3420.1}

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