M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_25030

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25030 401 8.35 Mlig455_014751

Neo: -

Age: Down-Up-Down

 Mlig455_014751 {REF} {Length: 2349} {RNA1509_19923} {RNA1310_20222} {RNA815_2554}

Cumulative graph for MligTC455_25030

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.149 3.421 0.45055 1.00000
RegionR2 1.237 3.421 0.07225 0.32800
RegionR3 0.101 3.421 0.86479 1.00000
RegionR4 -0.626 3.421 0.38435 0.70903
RegionR5 -0.933 3.421 0.13197 0.36973
RegionR6 0.441 3.421 0.45182 1.00000
RegionR7 0.903 3.421 0.16267 0.74472
RegionR8 0.027 3.421 0.97516 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.278 3.421 0.89653 1.00000
RegenerationR2 0.091 3.421 0.88207 1.00000
RegenerationR3 0.762 3.421 0.26098 0.69579
RegenerationR4 0.558 3.421 0.44390 0.83899
RegenerationR5 0.575 3.421 0.40477 0.80188
RegenerationR6 -0.458 3.421 0.51797 0.81892
RegenerationBL -0.454 3.421 0.55386 0.91035
RegenerationTP -0.79 3.421 0.35414 0.79560


Genes with expression patterns similar to MligTC455_25030

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25030 401 8.35 Mlig455_014751

Neo: -

Age: Down-Up-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014751 {REF} {Length: 2349} {RNA1509_19923} {RNA1310_20222} {RNA815_2554}
2. MligTC455_48348 938 19.55 Mlig455_027793, Mlig455_063494

Neo: -

Age: logFC(26M/2M)=-0.661

Region-enriched R8: 1.890/0.04247

 SCN5A 3.319 - - 0.950 0.769 0.762 0.838

Mlig455_027793 {REF} {Length: 6955} {Pfam: Ion transport protein [PF00520.33, score=754.1]; Polycystin cation channel [PF08016.14, score=55.1]; ZIP Zinc transporter [PF02535.24, score=22.9]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=22.8]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=1273, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=1260, Expect=0.0]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=1253, Expect=0.0]} {Dmel: FBgn0285944, para, paralytic, [Score=914, Expect=0.0]} {Celegans: WBGene00000367, cca-1, Voltage-dependent T-type calcium channel subunit alpha, [Score=452, Expect=2e-130]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [RH, Score=1245, Expect=0.0]} {RNA1509_2331} {RNA1310_490.1} {RNA815_185.1}

Mlig455_063494 {REF} {Length: 7000} {Pfam: Ion transport protein [PF00520.33, score=755.0]; Polycystin cation channel [PF08016.14, score=55.6]; ZIP Zinc transporter [PF02535.24, score=23.8]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=22.8]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=1273, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [Score=1261, Expect=0.0]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [Score=1240, Expect=0.0]} {Dmel: FBgn0285944, para, paralytic, [Score=914, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=310, Expect=8e-85]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [RH, Score=1244, Expect=0.0]} {RNA1509_2331} {RNA1310_490.1, RNA1509_2331} {RNA1509_2331, RNA815_185.1}
3. MligTC455_33343 459 9.56 Mlig455_063303

Neo: -

Age: -

Region-enriched R2: 1.600/0.01675

 ITPR1 3.247 - 0.735 - 0.831 0.731 0.950 Mlig455_063303 {REF} {Length: 3962} {Pfam: RyR and IP3R Homology associated [PF08454.13, score=68.3]; Ion transport protein [PF00520.33, score=28.7]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=166, Expect=6e-41]} {Mouse: ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=182, Expect=7e-46]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=179, Expect=4e-45]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=155, Expect=5e-38]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=1044, Expect=0.0]} {RNA1509_30811} {RNA1310_939} {RNA815_220}
4. MligTC455_46168 633 13.18 Mlig455_016182

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.686

 RIPK4 2.51 0.739 - - 0.956 0.815 - Mlig455_016182 {REF} {Length: 2089} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.7]; Ankyrin repeats (many copies) [PF13637.8, score=64.8]; Ankyrin repeat [PF13606.8, score=56.9]; Ankyrin repeats (many copies) [PF13857.8, score=51.0]; Ankyrin repeat [PF00023.32, score=50.6]} {Human: ENSG00000183421, RIPK4, receptor interacting serine/threonine kinase 4, [Score=69.7, Expect=9e-12]} {Mouse: ENSMUSG00000005251, Ripk4, receptor-interacting serine-threonine kinase 4, [Score=65.9, Expect=8e-11]; ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0039590, CG10011, [Score=57.8, Expect=3e-08]} {Smed: dd_Smed_v6_14278_0_1, dd_Smed_v6_14278_0_1, [RH, Score=97.4, Expect=7e-22]} {RNA1509_22389, RNA1509_49493} {RNA1310_14320.1, RNA1509_22389, RNA1509_49493} {RNA1509_22389, RNA1509_49493, RNA815_8642}
5. MligTC455_34892 372 7.75 Mlig455_064967

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.604

Region-enriched R8: 3.123/0.00904

 CYP2J2 2.497 - - 0.961 0.745 0.791 - Mlig455_064967 {REF} {Length: 3245} {Pfam: Cytochrome P450 [PF00067.24, score=299.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=261, Expect=7e-81]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [RH, Score=276, Expect=9e-87]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [RH, Score=268, Expect=2e-83]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [RH, Score=267, Expect=2e-83]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=186, Expect=2e-52]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=226, Expect=4e-68]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=263, Expect=3e-82]} {RNA1509_38384, RNA1509_39728, RNA1509_51765} {RNA1310_10949.2, RNA1509_38384, RNA1509_39728, RNA1509_51765} {RNA1509_38384, RNA1509_39728, RNA1509_51765, RNA815_7159}
6. MligTC455_22713 787 16.4 Mlig455_023280

Neo: -

Age: -

 2.487 - - 0.962 0.772 0.753 - Mlig455_023280 {REF} {Length: 2898} {RNA1509_17376} {RNA1310_6954} {RNA815_8376.1}
7. MligTC455_43667 251 5.24 Mlig455_070631

Neo: -

Age: Down-Down-Up

 KY 2.439 - - 0.777 - 0.704 0.958 Mlig455_070631 {REF} {Length: 5010} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=114, Expect=3e-25]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=114, Expect=3e-25]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=151, Expect=4e-37]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=139, Expect=2e-34]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=136, Expect=4e-32]} {RNA1509_26818, RNA1509_52206, RNA1509_7582} {RNA1310_2203, RNA1509_26818, RNA1509_52206, RNA1509_7582} {RNA1509_26818, RNA1509_52206, RNA1509_7582, RNA815_6135}
8. MligTC455_33841 898 18.71 Mlig455_004818, Mlig455_004886

Neo: -

Age: logFC(26M/2M)=-0.301

Region-enriched R2: 1.729/0.00165

 CDKL1 1.839 0.961 - - - - 0.878

Mlig455_004818 {REF} {Length: 2858} {Pfam: Protein kinase domain [PF00069.27, score=245.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=115.2]; RIO1 family [PF01163.24, score=22.4]; Haspin like kinase domain [PF12330.10, score=17.8]} {Human: ENSG00000100490, CDKL1, cyclin dependent kinase like 1, [RH, Score=427, Expect=2e-147]; ENSG00000205111, CDKL4, cyclin dependent kinase like 4, [RH, Score=422, Expect=4e-145]} {Mouse: ENSMUSG00000020990, Cdkl1, cyclin-dependent kinase-like 1 (CDC2-related kinase), [RH, Score=430, Expect=6e-149]; ENSMUSG00000033966, Cdkl4, cyclin-dependent kinase-like 4, [RH, Score=421, Expect=1e-145]} {Dmel: FBgn0031730, CG7236, [RH, Score=379, Expect=7e-128]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [RH, Score=395, Expect=1e-133]} {Smed: dd_Smed_v6_9353_0_1, dd_Smed_v6_9353_0_1, [RH, Score=478, Expect=1e-167]} {RNA1509_19679} {RNA1310_6686.2} {RNA815_5397}

Mlig455_004886 {REF} {Length: 2943} {Pfam: Protein kinase domain [PF00069.27, score=245.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=115.0]; RIO1 family [PF01163.24, score=22.4]; Haspin like kinase domain [PF12330.10, score=17.8]; ABC1 atypical kinase-like domain [PF03109.18, score=17.7]} {Human: ENSG00000100490, CDKL1, cyclin dependent kinase like 1, [RH, Score=428, Expect=6e-148]; ENSG00000205111, CDKL4, cyclin dependent kinase like 4, [RH, Score=422, Expect=4e-146]} {Mouse: ENSMUSG00000020990, Cdkl1, cyclin-dependent kinase-like 1 (CDC2-related kinase), [RH, Score=431, Expect=2e-149]; ENSMUSG00000033966, Cdkl4, cyclin-dependent kinase-like 4, [RH, Score=422, Expect=6e-146]} {Dmel: FBgn0031730, CG7236, [RH, Score=380, Expect=3e-128]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [RH, Score=392, Expect=2e-132]} {Smed: dd_Smed_v6_9353_0_1, dd_Smed_v6_9353_0_1, [RH, Score=479, Expect=5e-168]} {RNA1509_19679} {RNA1310_6686.2} {RNA815_5397}
9. MligTC455_15671 88 1.84 Mlig455_059458

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.370

Region-enriched R4: 4.705/0.00509

 KIAA0895L 1.833 - - 0.859 - - 0.974 Mlig455_059458 {REF} {Length: 3483} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1704) [PF08014.13, score=37.3]} {Human: ENSG00000196123, KIAA0895L, KIAA0895 like, [RH, Score=151, Expect=4e-40]; ENSG00000164542, KIAA0895, KIAA0895, [RH, Score=150, Expect=1e-39]} {Mouse: ENSMUSG00000014837, 4931428F04Rik, RIKEN cDNA 4931428F04 gene, [RH, Score=156, Expect=4e-42]} {Smed: dd_Smed_v6_103892_0_1, dd_Smed_v6_103892_0_1, [RH, Score=98.6, Expect=3e-25]} {RNA1509_47713, RNA1509_49841} {RNA1310_17536.1, RNA1509_47713, RNA1509_49841} {RNA1509_47713, RNA1509_49841, RNA815_7463.1}
10. MligTC455_03314 1048 21.84 Mlig455_065746

Neo: -

Age: -

 1.83 - - - 0.875 0.955 - Mlig455_065746 {REF} {Length: 1336} {Pfam: Sperm-tail PG-rich repeat [PF07004.14, score=23.9]} {RNA1509_5447} {RNA1310_26690.1} {RNA815_11584}
11. MligTC455_27709 127 2.64 Mlig455_002862

Neo: -

Age: -

 1.787 0.960 - - - 0.827 - Mlig455_002862 {REF} {Length: 3278} {TRANSSPLICED} {RNA1509_44695} {RNA1310_12605, RNA1509_44695} {RNA1509_44695, RNA815_5670}
12. MligTC455_34072 454 9.46 Mlig455_029674

Neo: -

Age: logFC(26M/2M)=-0.376

Region-enriched R2: 2.315/0.04888

 1.778 - 0.962 0.816 - - - Mlig455_029674 {REF} {Length: 3896} {Pfam: SH3 domain [PF17902.3, score=34.0]; Plectin repeat [PF00681.22, score=33.8]} {Smed: dd_Smed_v6_16329_0_1, dd_Smed_v6_16329_0_1, [RH, Score=79.3, Expect=4e-15]} {RNA1509_4651} {RNA1310_7377.1, RNA1509_4651} {RNA1509_4651, RNA815_2196}
13. MligTC455_54076 715 14.9 Mlig455_015419

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.789

 CUBN 1.773 - - 0.963 0.810 - - Mlig455_015419 {REF} {Length: 1794} {Pfam: CUB domain [PF00431.22, score=65.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=63.2, Expect=4e-10]; ENSG00000095587, TLL2, tolloid like 2, [Score=61.6, Expect=1e-09]; ENSG00000187908, DMBT1, deleted in malignant brain tumors 1, [Score=60.8, Expect=2e-09]; ENSG00000038295, TLL1, tolloid like 1, [Score=60.1, Expect=4e-09]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=72.0, Expect=4e-13]} {Dmel: FBgn0004885, tok, tolkin, [Score=58.9, Expect=4e-09]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=64.7, Expect=4e-11]} {RNA1509_9300} {RNA1310_18452, RNA1509_9300} {RNA1509_9300, RNA815_8451}
14. MligTC455_41180 128 2.66 Mlig455_048529

Neo: -

Age: -

Region-enriched R2: 3.286/0.00629

 1.727 0.950 0.777 - - - - Mlig455_048529 {REF} {Length: 672} {NoTransDecoderORF} {RNA1310_69878} {RNA815_35715}
15. MligTC455_44071 453 9.45 Mlig455_013709

Neo: -

Age: Up-Up-Down

 1.711 - - 0.962 - - 0.749 Mlig455_013709 {REF} {Length: 3442} {RNA1509_15754} {RNA1310_29321.1} {RNA815_17623.2}
16. MligTC455_27220 3965 82.6 Mlig455_007059

Neo: -

Age: logFC(26M/2M)=-0.158

 TEKT2 1.71 - - - - 0.957 0.753 Mlig455_007059 {REF} {Length: 2591} {TRANSSPLICED} {Pfam: Tektin family [PF03148.16, score=425.6]} {Human: ENSG00000092850, TEKT2, tektin 2, [RH, Score=421, Expect=5e-145]} {Mouse: ENSMUSG00000028845, Tekt2, tektin 2, [RH, Score=387, Expect=4e-132]} {Dmel: FBgn0034816, CG3085, [RH, Score=213, Expect=2e-64]} {Celegans: WBGene00019828, R02E12.4, [Score=78.2, Expect=2e-15]} {Smed: dd_Smed_v6_2339_0_1, dd_Smed_v6_2339_0_1, [RH, Score=543, Expect=0.0]} {RNA1509_1922, RNA1509_21664, RNA1509_27270, RNA1509_30387, RNA1509_30865, RNA1509_3752, RNA1509_44905, RNA1509_58859} {RNA1310_13089.2, RNA1509_1922, RNA1509_21664, RNA1509_27270, RNA1509_30387, RNA1509_30865, RNA1509_3752, RNA1509_44905, RNA1509_58859} {RNA1509_1922, RNA1509_21664, RNA1509_27270, RNA1509_30387, RNA1509_30865, RNA1509_3752, RNA1509_44905, RNA1509_58859, RNA815_4479}
17. MligTC455_52030 1769 36.86 Mlig455_056492

Neo: -

Age: Down-Down-Up

 DLL1 1.68 - - 0.954 - 0.726 - Mlig455_056492 {REF} {Length: 2332} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=71.2]; Delta serrate ligand [PF01414.21, score=49.1]; Human growth factor-like EGF [PF12661.9, score=42.6]; Calcium-binding EGF domain [PF07645.17, score=28.2]; EGF domain [PF12947.9, score=23.9]} {Human: ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [Score=164, Expect=1e-42]; ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [Score=164, Expect=1e-42]; ENSG00000128917, DLL4, delta like canonical Notch ligand 4, [Score=157, Expect=2e-40]} {Mouse: ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=166, Expect=2e-43]} {Dmel: FBgn0004647, N, Notch, [Score=152, Expect=2e-38]} {Celegans: WBGene00000792, crb-1, Drosophila CRumBs homolog, [Score=126, Expect=4e-30]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=135, Expect=3e-33]} {RNA1509_9673} {RNA1310_6973.1} {RNA815_2635.2}
18. MligTC455_52029 1723 35.89 Mlig455_000356

Neo: -

Age: Down-Up-Up

 DLL1 1.678 - - 0.955 - 0.723 - Mlig455_000356 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=87.1]; Human growth factor-like EGF [PF12661.9, score=49.5]; Delta serrate ligand [PF01414.21, score=48.8]; Calcium-binding EGF domain [PF07645.17, score=26.3]; EGF domain [PF12947.9, score=19.4]} {Human: ENSG00000275555, DLL1, delta like canonical Notch ligand 1, [Score=171, Expect=8e-45]; ENSG00000198719, DLL1, delta like canonical Notch ligand 1, [Score=171, Expect=8e-45]; ENSG00000128917, DLL4, delta like canonical Notch ligand 4, [Score=169, Expect=2e-44]; ENSG00000134376, CRB1, crumbs 1, cell polarity complex component, [Score=167, Expect=6e-43]} {Mouse: ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=172, Expect=2e-45]; ENSMUSG00000027276, Jag1, jagged 1, [Score=167, Expect=5e-43]; ENSMUSG00000027878, Notch2, notch 2, [Score=165, Expect=3e-42]; ENSMUSG00000027314, Dll4, delta like canonical Notch ligand 4, [Score=164, Expect=1e-42]; ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=164, Expect=4e-42]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=164, Expect=4e-42]} {Dmel: FBgn0004647, N, Notch, [Score=174, Expect=1e-45]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=137, Expect=2e-33]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=148, Expect=4e-37]} {RNA1509_42642, RNA1509_9673} {RNA1310_6973.1, RNA1509_42642, RNA1509_9673} {RNA1509_42642, RNA1509_9673, RNA815_2635.1}
19. MligTC455_32560 474 9.88 Mlig455_005052

Neo: -

Age: -

 1.656 - - - - 0.953 0.703 Mlig455_005052 {REF} {Length: 3173} {Smed: dd_Smed_v6_9637_0_1, dd_Smed_v6_9637_0_1, [Score=71.6, Expect=1e-12]} {RNA1509_2854} {RNA1310_3474} {RNA815_179}
20. MligTC455_23716 142 2.96 Mlig455_046798

Neo: -

Age: Down-Down-Down

 0.958 0.958 - - - - - Mlig455_046798 {REF} {Length: 1088} {RNA1509_35160} {RNA1310_48019} {RNA815_16808}
21. MligTC455_23718 156 3.25 Mlig455_069946

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.465

 0.957 0.957 - - - - - Mlig455_069946 {REF} {Length: 894} {RNA1509_35160} {RNA1310_48019} {RNA815_16808}
22. MligTC455_20742 748 15.59 Mlig455_056524

Neo: -

Age: logFC(26M/2M)=0.319

 RPS24 0.956 - - - 0.956 - - Mlig455_056524 {REF} {Length: 2157} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=71.0]; Ribosomal protein S24e [PF01282.21, score=67.4]; Ankyrin repeats (many copies) [PF13637.8, score=55.2]; Ankyrin repeat [PF00023.32, score=46.3]; Ankyrin repeat [PF13606.8, score=41.7]; Ankyrin repeats (many copies) [PF13857.8, score=33.3]} {Human: ENSG00000138326, RPS24, ribosomal protein S24, [RH, Score=90.9, Expect=2e-19]} {Mouse: ENSMUSG00000025290, Rps24, ribosomal protein S24, [RH, Score=88.6, Expect=2e-20]} {Dmel: FBgn0261596, RpS24, Ribosomal protein S24, [RH, Score=98.6, Expect=4e-24]} {Celegans: WBGene00004493, rps-24, Ribosomal Protein, Small subunit, [RH, Score=112, Expect=3e-29]} {Smed: dd_Smed_v6_164_0_1, dd_Smed_v6_164_0_1, [RH, Score=100, Expect=4e-25]} {RNA1509_18314} {RNA1310_15458, RNA1509_18314} {RNA1509_18314, RNA815_6508}
23. MligTC455_49110 155 3.23 Mlig455_006529, Mlig455_006645

Neo: -

Age: -

Region-enriched R4: 3.272/0.04020

 0.956 - - - 0.956 - -

Mlig455_006529 {REF} {Length: 4092} {TRANSSPLICED} {RNA1509_48868} {RNA1310_23809.1, RNA1509_48868} {RNA1509_48868, RNA815_16307}

Mlig455_006645 {REF} {Length: 4921} {Pfam: Transmembrane family 220, helix [PF15071.8, score=60.7]} {Mouse: ENSMUSG00000050270, Tmem220, transmembrane protein 220, [RH, Score=65.9, Expect=4e-12]} {RNA1509_48868} {RNA1310_23809.1} {RNA815_16307}
24. MligTC455_02244 25 0.53 Mlig455_026007, Mlig455_070432

Neo: -

Age: -

 0.954 0.954 - - - - -

Mlig455_026007 {REF} {Length: 604} {Smed: dd_Smed_v6_3944_0_1, dd_Smed_v6_3944_0_1, [Score=91.3, Expect=3e-24]} {RNA1310_143494}

Mlig455_070432 {REF} {Length: 1561} {Dmel: FBgn0050419, CG30419, [RH, Score=61.6, Expect=1e-11]} {Smed: dd_Smed_v6_3944_0_1, dd_Smed_v6_3944_0_1, [RH, Score=112, Expect=2e-32]} {RNA1310_143494}
25. MligTC455_11437 177 3.68 Mlig455_017503

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.932

 0.953 - - 0.953 - - - Mlig455_017503 {REF} {Length: 2480} {Pfam: Acetyltransferase (GNAT) domain [PF13508.9, score=25.3]; Acetyltransferase (GNAT) family [PF00583.27, score=24.1]; FR47-like protein [PF08445.12, score=21.2]} {RNA1509_54643} {RNA1310_17365} {RNA815_7880}
26. MligTC455_29850 34 0.72 Mlig455_056420

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_056420 {REF} {Length: 636} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=38.1]} {Smed: dd_Smed_v6_3242_0_1, dd_Smed_v6_3242_0_1, [Score=42.4, Expect=9e-06]} {RNA1509_13774} {RNA1310_41660} {RNA815_55778}
27. MligTC455_25217 983 20.49 Mlig455_014480

Neo: -

Age: logFC(26M/2M)=-0.277

 FHAD1 0.95 - - - - 0.950 - Mlig455_014480 {REF} {Length: 4999} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=39.7]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=24.9]} {Human: ENSG00000142621, FHAD1, forkhead associated phosphopeptide binding domain 1, [RH, Score=215, Expect=9e-56]} {Mouse: ENSMUSG00000051435, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [RH, Score=182, Expect=1e-45]; ENSMUSG00000116181, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [RH, Score=182, Expect=1e-45]} {Smed: dd_Smed_v6_14350_0_1, dd_Smed_v6_14350_0_1, [Score=346, Expect=1e-98]} {RNA1509_3924} {RNA1310_1575.2} {RNA815_2279}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA