M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_25143

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25143 837 17.43 Mlig455_006007, Mlig455_066588

Neo: -

Age: -

Region-enriched R5: 1.312/0.00214

Mlig455_006007 {REF} {Length: 7605} {Pfam: Galactoside-binding lectin [PF00337.24, score=75.9]} {Smed: dd_Smed_v6_10749_0_1, dd_Smed_v6_10749_0_1, [Score=66.6, Expect=8e-11]} {RNA1509_57716} {RNA1310_920.1, RNA1509_57716} {RNA1509_57716, RNA815_1560}

Mlig455_066588 {REF} {Length: 7433} {Pfam: Galactoside-binding lectin [PF00337.24, score=77.0]} {Smed: dd_Smed_v6_10749_0_1, dd_Smed_v6_10749_0_1, [Score=67.0, Expect=6e-11]} {RNA1509_57716} {RNA1310_3547.1} {RNA815_1339}

Cumulative graph for MligTC455_25143

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.004 4.455 0.99636 1.00000
RegionR2 -0.491 4.455 0.34169 0.73396
RegionR3 -0.884 4.455 0.04608 0.37582
RegionR4 -0.328 4.455 0.52009 0.84513
RegionR5 1.312 4.455 0.00014 0.00214
RegionR6 0.336 4.455 0.40050 0.97166
RegionR7 0.597 4.455 0.20933 0.82285
RegionR8 -0.545 4.455 0.47601 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.76 4.455 0.05253 0.70520
RegenerationR2 0.581 4.455 0.16438 0.60212
RegenerationR3 0.677 4.455 0.15239 0.58197
RegenerationR4 0.361 4.455 0.44845 0.84087
RegenerationR5 -0.452 4.455 0.25621 0.68880
RegenerationR6 -0.236 4.455 0.59372 0.86567
RegenerationBL -0.218 4.455 0.68548 1.00000
RegenerationTP -0.932 4.455 0.16188 0.59091


Genes with expression patterns similar to MligTC455_25143

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25143 837 17.43 Mlig455_006007, Mlig455_066588

Neo: -

Age: -

Region-enriched R5: 1.312/0.00214

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_006007 {REF} {Length: 7605} {Pfam: Galactoside-binding lectin [PF00337.24, score=75.9]} {Smed: dd_Smed_v6_10749_0_1, dd_Smed_v6_10749_0_1, [Score=66.6, Expect=8e-11]} {RNA1509_57716} {RNA1310_920.1, RNA1509_57716} {RNA1509_57716, RNA815_1560}

Mlig455_066588 {REF} {Length: 7433} {Pfam: Galactoside-binding lectin [PF00337.24, score=77.0]} {Smed: dd_Smed_v6_10749_0_1, dd_Smed_v6_10749_0_1, [Score=67.0, Expect=6e-11]} {RNA1509_57716} {RNA1310_3547.1} {RNA815_1339}
2. MligTC455_47215 1067 22.24 Mlig455_020254

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.186

 PSKH1 2.699 - - - 0.955 0.836 0.908 Mlig455_020254 {REF} {Length: 2236} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=124.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=54.5]} {Human: ENSG00000159792, PSKH1, protein serine kinase H1, [Score=139, Expect=2e-36]} {Mouse: ENSMUSG00000048310, Pskh1, protein serine kinase H1, [Score=139, Expect=1e-36]} {Dmel: FBgn0264607, CaMKII, Calcium/calmodulin-dependent protein kinase II, [Score=93.2, Expect=3e-20]} {Celegans: WBGene00019911, R06A10.4, [Score=120, Expect=3e-30]} {Smed: dd_Smed_v6_11695_0_1, dd_Smed_v6_11695_0_1, [Score=101, Expect=4e-24]} {RNA1509_14037, RNA1509_37045, RNA1509_45755, RNA1509_49443, RNA1509_56608} {RNA1310_15171.1, RNA1509_14037, RNA1509_37045, RNA1509_45755, RNA1509_49443, RNA1509_56608} {RNA1509_14037, RNA1509_37045, RNA1509_45755, RNA1509_49443, RNA1509_56608, RNA815_22152}
3. MligTC455_46196 2159 44.98 Mlig455_047133, Mlig455_047135, Mlig455_068480

Neo: -

Age: -

 2.379 - 0.708 - - 0.713 0.958

Mlig455_047133 {REF} {Length: 2777} {Pfam: WSC domain [PF01822.21, score=48.2]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=52.4, Expect=8e-07]} {RNA1509_33020} {RNA1310_2214} {RNA815_4028.1}

Mlig455_047135 {REF} {Length: 2240} {RNA1509_33020} {RNA1310_2349, RNA1509_33020} {RNA1509_33020, RNA815_4028.1}

Mlig455_068480 {REF} {Length: 5647} {Dmel: FBgn0264693, ens, ensconsin, [Score=65.1, Expect=2e-10]} {Smed: dd_Smed_v6_5361_0_1, dd_Smed_v6_5361_0_1, [Score=59.3, Expect=1e-08]} {RNA1509_30837} {RNA1310_2110.2} {RNA815_4028.1}
4. MligTC455_21092 581 12.11 Mlig455_014955

Neo: -

Age: -

 LRP3 1.755 - - - 0.800 - 0.955 Mlig455_014955 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=53.2]} {Human: ENSG00000130881, LRP3, LDL receptor related protein 3, [Score=115, Expect=1e-27]} {Mouse: ENSMUSG00000001802, Lrp3, low density lipoprotein receptor-related protein 3, [RH, Score=114, Expect=1e-27]} {Dmel: FBgn0053087, LRP1, LDL receptor protein 1, [Score=71.6, Expect=3e-13]} {Celegans: WBGene00003072, lrp-2, Low-density lipoprotein RecePtor related, [Score=73.6, Expect=6e-14]} {Smed: dd_Smed_v6_6784_0_1, dd_Smed_v6_6784_0_1, [RH, Score=155, Expect=2e-43]} {RNA1509_31076} {RNA1310_16875.1} {RNA815_33006}
5. MligTC455_49233 685 14.27 Mlig455_069309

Neo: Irradiation

Age: Up-Up-Down

 PRKAG1 1.729 - - - 0.776 - 0.953 Mlig455_069309 {REF} {Length: 4161} {Pfam: CBS domain [PF00571.30, score=40.6]} {Human: ENSG00000181929, PRKAG1, protein kinase AMP-activated non-catalytic subunit gamma 1, [Score=251, Expect=1e-76]; ENSG00000106617, PRKAG2, protein kinase AMP-activated non-catalytic subunit gamma 2, [Score=248, Expect=8e-73]} {Mouse: ENSMUSG00000067713, Prkag1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit, [Score=251, Expect=1e-76]; ENSMUSG00000028944, Prkag2, protein kinase, AMP-activated, gamma 2 non-catalytic subunit, [Score=247, Expect=2e-72]} {Dmel: FBgn0264357, SNF4Agamma, SNF4/AMP-activated protein kinase gamma subunit, [Score=276, Expect=7e-83]} {Celegans: WBGene00013732, aakg-1, AMP-Activated protein Kinase Gamma subunit, [Score=220, Expect=1e-63]} {Smed: dd_Smed_v6_4877_0_1, dd_Smed_v6_4877_0_1, [Score=205, Expect=2e-59]} {RNA1509_13211} {RNA1310_6732.1, RNA1509_13211} {RNA1509_13211, RNA815_8244.1}
6. MligTC455_29431 797 16.59 Mlig455_025887

Neo: -

Age: -

Region-enriched R5: 1.079/0.00034

 RPS6KB1 1.714 0.752 - - - - 0.962 Mlig455_025887 {REF} {Length: 4756} {Pfam: Protein kinase domain [PF00069.27, score=231.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=120.8]; Integrase zinc binding domain [PF17921.3, score=47.6]; Protein kinase C terminal domain [PF00433.26, score=40.8]; Kinase-like [PF14531.8, score=27.5]; ABC1 atypical kinase-like domain [PF03109.18, score=18.1]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [RH, Score=489, Expect=6e-168]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [RH, Score=489, Expect=3e-167]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [RH, Score=467, Expect=4e-159]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [RH, Score=457, Expect=1e-154]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [RH, Score=466, Expect=3e-159]} {RNA1509_12463} {RNA1310_6456} {RNA815_17601}
7. MligTC455_24343 499 10.39 Mlig455_009796

Neo: -

Age: -

 1.709 - - 0.755 - - 0.954 Mlig455_009796 {REF} {Length: 1301} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8336} {RNA1310_6765} {RNA815_10771}
8. MligTC455_44569 311 6.48 Mlig455_050289

Neo: -

Age: Down-Up-Down

 PARL 1.694 - 0.726 - - - 0.968 Mlig455_050289 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=30.8]} {Human: ENSG00000175193, PARL, presenilin associated rhomboid like, [Score=48.9, Expect=8e-06]} {Mouse: ENSMUSG00000033918, Parl, presenilin associated, rhomboid-like, [Score=49.7, Expect=4e-06]} {RNA1509_23398, RNA1509_32773, RNA1509_55819} {RNA1310_18994.1, RNA1509_23398, RNA1509_55819} {RNA1509_23398, RNA1509_55819, RNA815_19436}
9. MligTC455_45105 609 12.68 Mlig455_042122

Neo: -

Age: -

 QRICH2 1.692 - - - - 0.729 0.963 Mlig455_042122 {REF} {Length: 1526} {TRANSSPLICED} {Pfam: Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=46.3]} {Human: ENSG00000129646, QRICH2, glutamine rich 2, [Score=59.7, Expect=9e-10]} {Mouse: ENSMUSG00000045350, Fam186a, family with sequence similarity 186, member A, [RH, Score=70.1, Expect=2e-13]} {RNA1310_22924.1} {RNA815_30357.2}
10. MligTC455_27841 1118 23.3 Mlig455_021442, Mlig455_037900

Neo: -

Age: -

Regeneration-upregulated BL: 4.099

Regeneration-enriched BL: 4.099

 0.973 - - - 0.973 - -

Mlig455_021442 {REF} {Length: 2929} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}

Mlig455_037900 {REF} {Length: 3423} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}
11. MligTC455_48887 342 7.12 Mlig455_068740

Neo: -

Age: -

Region-enriched R5: 2.022/0.00015

 0.965 - - - - - 0.965 Mlig455_068740 {REF} {Length: 2197} {TRANSSPLICED} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=51.4]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=29.7]} {RNA1509_15686} {RNA1310_3343.1} {RNA815_561.1}
12. MligTC455_47150 1035 21.57 Mlig455_015744, Mlig455_049450

Neo: -

Age: -

Region-enriched R5: 1.513/0.00315

 MFSD9 0.963 - - - - - 0.963

Mlig455_015744 {REF} {Length: 1507} {Pfam: Major Facilitator Superfamily [PF07690.18, score=41.2]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [Score=73.2, Expect=2e-13]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [Score=90.1, Expect=3e-19]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [Score=145, Expect=2e-39]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582}

Mlig455_049450 {REF} {Length: 2590} {Pfam: Major Facilitator Superfamily [PF07690.18, score=50.6]} {Human: ENSG00000135953, MFSD9, major facilitator superfamily domain containing 9, [RH, Score=109, Expect=4e-25]} {Mouse: ENSMUSG00000041945, Mfsd9, major facilitator superfamily domain containing 9, [RH, Score=121, Expect=2e-29]} {Smed: dd_Smed_v6_9599_0_1, dd_Smed_v6_9599_0_1, [RH, Score=183, Expect=1e-52]} {RNA1509_53696} {RNA1310_20924} {RNA815_32582}
13. MligTC455_27847 510 10.62 Mlig455_013053, Mlig455_021443

Neo: -

Age: Down-Up-Down

Regeneration-upregulated BL: 3.564

Regeneration-enriched BL: 3.564

 0.962 - - - 0.962 - -

Mlig455_013053 {REF} {Length: 8840} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=77.1]; Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=47.8]; Aspartyl protease [PF13650.8, score=39.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Retroviral aspartyl protease [PF00077.22, score=28.2]; Aspartyl protease [PF09668.12, score=23.8]; Putative peptidase (DUF1758) [PF05585.14, score=22.0]; Retroviral aspartyl protease [PF08284.13, score=19.2]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=340, Expect=7e-102]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}

Mlig455_021443 {REF} {Length: 1198} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=128.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=77.1]; Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=47.8]; Aspartyl protease [PF13650.8, score=39.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Retroviral aspartyl protease [PF00077.22, score=28.2]; Aspartyl protease [PF09668.12, score=23.8]; Putative peptidase (DUF1758) [PF05585.14, score=22.0]; Retroviral aspartyl protease [PF08284.13, score=19.2]; DDE superfamily endonuclease [PF13358.8, score=18.8]} {Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [Score=340, Expect=7e-102]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1}
14. MligTC455_32794 550 11.46 Mlig455_022149

Neo: -

Age: Up-Down-Down

 RBM4B 0.961 - - - - - 0.961 Mlig455_022149 {REF} {Length: 6473} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=37.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.9]} {Human: ENSG00000173914, RBM4B, RNA binding motif protein 4B, [RH, Score=71.6, Expect=1e-14]; ENSG00000173933, RBM4, RNA binding motif protein 4, [RH, Score=71.6, Expect=2e-14]; ENSG00000239306, RBM14, RNA binding motif protein 14, [RH, Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000094936, Rbm4, RNA binding motif protein 4, [RH, Score=71.6, Expect=9e-15]; ENSMUSG00000033760, Rbm4b, RNA binding motif protein 4B, [RH, Score=71.6, Expect=9e-15]; ENSMUSG00000006456, Rbm14, RNA binding motif protein 14, [RH, Score=70.9, Expect=5e-13]} {Celegans: WBGene00004384, rnp-1, RNA-binding protein rnp-1, [Score=50.8, Expect=5e-07]} {Smed: dd_Smed_v6_14010_0_1, dd_Smed_v6_14010_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_22494, RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650} {RNA1310_8274.1, RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650} {RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650, RNA815_8688.1}
15. MligTC455_44139 509 10.6 Mlig455_040315, Mlig455_066517

Neo: -

Age: -

 RASSF1 0.958 - - - - - 0.958

Mlig455_040315 {REF} {Length: 3557} {TRANSSPLICED} {tRNA: Ser(TGA),pseudo, score=25.9} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=37.1]; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain [PF16517.7, score=34.3]} {Human: ENSG00000068028, RASSF1, Ras association domain family member 1, [RH, Score=88.6, Expect=7e-19]; ENSG00000266094, RASSF5, Ras association domain family member 5, [RH, Score=87.8, Expect=1e-18]} {Mouse: ENSMUSG00000010067, Rassf1, Ras association (RalGDS/AF-6) domain family member 1, [Score=88.6, Expect=5e-19]} {Celegans: WBGene00011995, rsf-1, RASSF (Ras-association domain family) homolog, [RH, Score=91.7, Expect=4e-19]} {Smed: dd_Smed_v6_3858_0_2, dd_Smed_v6_3858_0_2, [Score=134, Expect=4e-33]} {RNA1509_39106} {RNA1310_10492, RNA1509_39106} {RNA1509_39106, RNA815_5448.1}

Mlig455_066517 {REF} {Length: 3442} {TRANSSPLICED} {tRNA: Ser(TGA),pseudo, score=25.9} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=37.1]; Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain [PF16517.7, score=34.4]} {Human: ENSG00000068028, RASSF1, Ras association domain family member 1, [RH, Score=88.6, Expect=7e-19]; ENSG00000266094, RASSF5, Ras association domain family member 5, [RH, Score=87.8, Expect=1e-18]} {Mouse: ENSMUSG00000010067, Rassf1, Ras association (RalGDS/AF-6) domain family member 1, [Score=88.6, Expect=5e-19]} {Celegans: WBGene00011995, rsf-1, RASSF (Ras-association domain family) homolog, [RH, Score=91.7, Expect=4e-19]} {Smed: dd_Smed_v6_3858_0_2, dd_Smed_v6_3858_0_2, [Score=133, Expect=9e-33]} {RNA1509_27973} {RNA1310_10492} {RNA815_5448.1}
16. MligTC455_34256 621 12.94 Mlig455_031076, Mlig455_031110

Neo: -

Age: -

 DNAJC16 0.956 - - - - - 0.956

Mlig455_031076 {REF} {Length: 3558} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=82.3]; Thioredoxin [PF00085.22, score=19.9]} {Human: ENSG00000116138, DNAJC16, DnaJ heat shock protein family (Hsp40) member C16, [RH, Score=267, Expect=3e-77]} {Mouse: ENSMUSG00000040697, Dnajc16, DnaJ heat shock protein family (Hsp40) member C16, [RH, Score=276, Expect=8e-81]} {Dmel: FBgn0058178, CG40178, [RH, Score=276, Expect=7e-81]} {Celegans: WBGene00001026, dnj-8, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=292, Expect=2e-86]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [RH, Score=152, Expect=7e-42]} {RNA1509_14527} {RNA1310_7652, RNA1509_14527} {RNA1509_14527, RNA815_8524}

Mlig455_031110 {REF} {Length: 3948} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=81.6]; Thioredoxin [PF00085.22, score=19.9]} {Human: ENSG00000116138, DNAJC16, DnaJ heat shock protein family (Hsp40) member C16, [RH, Score=266, Expect=6e-77]} {Mouse: ENSMUSG00000040697, Dnajc16, DnaJ heat shock protein family (Hsp40) member C16, [RH, Score=275, Expect=2e-80]} {Dmel: FBgn0058178, CG40178, [RH, Score=273, Expect=8e-80]} {Celegans: WBGene00001026, dnj-8, DNaJ domain (Prokaryotic heat shock protein), [RH, Score=291, Expect=3e-86]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [RH, Score=151, Expect=1e-41]} {RNA1509_14527, RNA1509_33204, RNA1509_51646} {RNA1310_7652, RNA1509_33204, RNA1509_51646} {RNA1509_33204, RNA1509_51646, RNA815_8524}
17. MligTC455_52555 1379 28.73 Mlig455_011709, Mlig455_049828, Mlig455_049877

Neo: -

Age: -

Region-specific R5: 2.185

Region-enriched R5: 1.855/0.00000

 P4HA1 0.954 - - - - - 0.954

Mlig455_011709 {REF} {Length: 2027} {TRANSSPLICED} {Pfam: Prolyl 4-Hydroxylase alpha-subunit, N-terminal region [PF08336.13, score=84.4]; 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=60.4]; 2OG-Fe(II) oxygenase superfamily [PF03171.22, score=27.5]; Tetratricopeptide repeat [PF07719.19, score=24.2]} {Human: ENSG00000122884, P4HA1, prolyl 4-hydroxylase subunit alpha 1, [RH, Score=408, Expect=7e-137]} {Mouse: ENSMUSG00000019916, P4ha1, procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide, [RH, Score=404, Expect=2e-135]} {Dmel: FBgn0039776, PH4alphaEFB, prolyl-4-hydroxylase-alpha EFB, [RH, Score=397, Expect=1e-132]} {Celegans: WBGene00004025, phy-2, Prolyl 4-hydroxylase subunit alpha-2, [RH, Score=388, Expect=3e-129]} {Smed: dd_Smed_v6_6625_0_1, dd_Smed_v6_6625_0_1, [RH, Score=396, Expect=6e-133]} {RNA1509_16732} {RNA1310_7776} {RNA815_2945.1}

Mlig455_049828 {REF} {Length: 3040} {Pfam: Prolyl 4-Hydroxylase alpha-subunit, N-terminal region [PF08336.13, score=85.6]; 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=60.4]; 2OG-Fe(II) oxygenase superfamily [PF03171.22, score=27.5]; Tetratricopeptide repeat [PF07719.19, score=23.4]} {Human: ENSG00000122884, P4HA1, prolyl 4-hydroxylase subunit alpha 1, [RH, Score=407, Expect=3e-136]} {Mouse: ENSMUSG00000019916, P4ha1, procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide, [RH, Score=403, Expect=7e-135]} {Dmel: FBgn0039776, PH4alphaEFB, prolyl-4-hydroxylase-alpha EFB, [RH, Score=396, Expect=3e-132]} {Celegans: WBGene00004025, phy-2, Prolyl 4-hydroxylase subunit alpha-2, [RH, Score=389, Expect=9e-130]} {Smed: dd_Smed_v6_6625_0_1, dd_Smed_v6_6625_0_1, [RH, Score=394, Expect=3e-132]} {RNA1509_16732} {RNA1310_7776} {RNA815_5850}

Mlig455_049877 {REF} {Length: 2829} {Pfam: Prolyl 4-Hydroxylase alpha-subunit, N-terminal region [PF08336.13, score=85.6]; 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=60.4]; 2OG-Fe(II) oxygenase superfamily [PF03171.22, score=27.5]; Tetratricopeptide repeat [PF07719.19, score=23.4]} {Human: ENSG00000122884, P4HA1, prolyl 4-hydroxylase subunit alpha 1, [RH, Score=407, Expect=3e-136]} {Mouse: ENSMUSG00000019916, P4ha1, procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide, [RH, Score=403, Expect=7e-135]} {Dmel: FBgn0039776, PH4alphaEFB, prolyl-4-hydroxylase-alpha EFB, [RH, Score=396, Expect=3e-132]} {Celegans: WBGene00004025, phy-2, Prolyl 4-hydroxylase subunit alpha-2, [RH, Score=389, Expect=9e-130]} {Smed: dd_Smed_v6_6625_0_1, dd_Smed_v6_6625_0_1, [RH, Score=394, Expect=3e-132]} {RNA1509_16732} {RNA1310_7776} {RNA815_2945.1}
18. MligTC455_53874 1547 32.22 Mlig455_004224, Mlig455_031048, Mlig455_031055

Neo: Int S/G2/M

Age: -

 ATP6V0B 0.954 - - - - - 0.954

Mlig455_004224 {REF} {Length: 1362} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=88.3]} {Human: ENSG00000117410, ATP6V0B, ATPase H+ transporting V0 subunit b, [RH, Score=259, Expect=3e-88]} {Mouse: ENSMUSG00000033379, Atp6v0b, ATPase, H+ transporting, lysosomal V0 subunit B, [RH, Score=259, Expect=2e-88]} {Dmel: FBgn0028662, VhaPPA1-1, Vacuolar H[+] ATPase PPA1 subunit 1, [RH, Score=217, Expect=1e-71]} {Celegans: WBGene00006913, vha-4, VHA-4; Vacuolar H ATPase, [RH, Score=218, Expect=4e-72]} {Smed: dd_Smed_v6_1622_0_1, dd_Smed_v6_1622_0_1, [RH, Score=261, Expect=2e-89]} {RNA1509_26018} {RNA1310_25584} {RNA815_9308.1}

Mlig455_031048 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=88.3]} {Human: ENSG00000117410, ATP6V0B, ATPase H+ transporting V0 subunit b, [RH, Score=259, Expect=3e-88]} {Mouse: ENSMUSG00000033379, Atp6v0b, ATPase, H+ transporting, lysosomal V0 subunit B, [RH, Score=259, Expect=2e-88]} {Dmel: FBgn0028662, VhaPPA1-1, Vacuolar H[+] ATPase PPA1 subunit 1, [RH, Score=217, Expect=1e-71]} {Celegans: WBGene00006913, vha-4, VHA-4; Vacuolar H ATPase, [RH, Score=218, Expect=4e-72]} {Smed: dd_Smed_v6_1622_0_1, dd_Smed_v6_1622_0_1, [RH, Score=261, Expect=2e-89]} {RNA1509_26018} {RNA1310_25584} {RNA815_9308.1}

Mlig455_031055 {REF} {Length: 1365} {TRANSSPLICED} {Pfam: ATP synthase subunit C [PF00137.23, score=88.3]} {Human: ENSG00000117410, ATP6V0B, ATPase H+ transporting V0 subunit b, [RH, Score=259, Expect=3e-88]} {Mouse: ENSMUSG00000033379, Atp6v0b, ATPase, H+ transporting, lysosomal V0 subunit B, [RH, Score=259, Expect=2e-88]} {Dmel: FBgn0028662, VhaPPA1-1, Vacuolar H[+] ATPase PPA1 subunit 1, [RH, Score=217, Expect=1e-71]} {Celegans: WBGene00006913, vha-4, VHA-4; Vacuolar H ATPase, [RH, Score=218, Expect=4e-72]} {Smed: dd_Smed_v6_1622_0_1, dd_Smed_v6_1622_0_1, [RH, Score=261, Expect=2e-89]} {RNA1509_26018, RNA1509_58235} {RNA1310_25584, RNA1509_26018, RNA1509_58235} {RNA1509_26018, RNA1509_58235, RNA815_9308.1}
19. MligTC455_11513 55 1.15 Mlig455_041683

Neo: -

Age: -

 0.952 0.952 - - - - - Mlig455_041683 {REF} {Length: 772} {RNA1509_45996} {RNA1310_61693} {RNA815_22732}
20. MligTC455_29066 215 4.47 Mlig455_043845

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_043845 {REF} {Length: 3707} {TRANSSPLICED} {RNA1509_13168} {RNA1310_4523} {RNA815_5087}
21. MligTC455_25201 771 16.07 Mlig455_067420, Mlig455_069560

Neo: -

Age: -

 SETD3 0.951 - - - - - 0.951

Mlig455_067420 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=37.7]; Rubisco LSMT substrate-binding [PF09273.13, score=25.0]} {Human: ENSG00000183576, SETD3, SET domain containing 3, [RH, Score=189, Expect=5e-53]} {Mouse: ENSMUSG00000056770, Setd3, SET domain containing 3, [RH, Score=191, Expect=4e-54]} {Dmel: FBgn0052732, CG32732, [RH, Score=127, Expect=1e-31]} {Smed: dd_Smed_v6_12202_0_1, dd_Smed_v6_12202_0_1, [RH, Score=137, Expect=1e-35]} {RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782} {RNA1310_16143.1, RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782} {RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782, RNA815_6937}

Mlig455_069560 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=37.7]; Rubisco LSMT substrate-binding [PF09273.13, score=25.6]} {Human: ENSG00000183576, SETD3, SET domain containing 3, [RH, Score=187, Expect=3e-52]} {Mouse: ENSMUSG00000056770, Setd3, SET domain containing 3, [RH, Score=192, Expect=2e-54]} {Dmel: FBgn0052732, CG32732, [RH, Score=127, Expect=2e-31]} {Smed: dd_Smed_v6_12202_0_1, dd_Smed_v6_12202_0_1, [RH, Score=138, Expect=7e-36]} {RNA1509_49950} {RNA1310_16143.1} {RNA815_6937}
22. MligTC455_36465 1635 34.06 Mlig455_065770, Mlig455_065793

Neo: -

Age: -

Region-enriched R5: 1.078/0.00340

 PPP1R16B 0.951 - - - - - 0.951

Mlig455_065770 {REF} {Length: 2766} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=99.7]; Ankyrin repeats (many copies) [PF13637.8, score=95.5]; Ankyrin repeats (many copies) [PF13857.8, score=78.3]; Ankyrin repeat [PF13606.8, score=69.8]; Ankyrin repeat [PF00023.32, score=63.3]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [RH, Score=313, Expect=3e-99]} {Mouse: ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [RH, Score=311, Expect=1e-98]} {Dmel: FBgn0036801, MYPT-75D, [RH, Score=341, Expect=4e-108]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [RH, Score=280, Expect=6e-88]} {Smed: dd_Smed_v6_5941_0_1, dd_Smed_v6_5941_0_1, [RH, Score=363, Expect=6e-119]} {RNA1509_24384} {RNA1310_7124, RNA1509_24384} {RNA1509_24384, RNA815_8638}

Mlig455_065793 {REF} {Length: 2614} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.6]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeat [PF13606.8, score=40.2]; Ankyrin repeat [PF00023.32, score=31.9]} {Human: ENSG00000101445, PPP1R16B, protein phosphatase 1 regulatory subunit 16B, [Score=254, Expect=4e-77]} {Mouse: ENSMUSG00000033819, Ppp1r16a, protein phosphatase 1, regulatory subunit 16A, [Score=251, Expect=1e-76]; ENSMUSG00000037754, Ppp1r16b, protein phosphatase 1, regulatory subunit 16B, [Score=251, Expect=3e-76]} {Dmel: FBgn0036801, MYPT-75D, [Score=281, Expect=8e-87]} {Celegans: WBGene00001582, gfi-2, GEI-4 (Four) Interacting protein, [Score=200, Expect=6e-58]} {Smed: dd_Smed_v6_5941_0_2, dd_Smed_v6_5941_0_2, [Score=291, Expect=7e-92]} {RNA1509_8915} {RNA1310_7124} {RNA815_14567}
23. MligTC455_18335 928 19.33 Mlig455_008623, Mlig455_030302

Neo: -

Age: -

 ARHGAP27 0.95 - - - - 0.950 -

Mlig455_008623 {REF} {Length: 5087} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=142.3]; PH domain [PF00169.31, score=19.8]} {Human: ENSG00000276836, ARHGAP27, Rho GTPase activating protein 27, [RH, Score=186, Expect=4e-49]; ENSG00000159314, ARHGAP27, Rho GTPase activating protein 27, [RH, Score=186, Expect=4e-49]; ENSG00000276907, ARHGAP27, Rho GTPase activating protein 27, [RH, Score=186, Expect=4e-49]} {Mouse: ENSMUSG00000034255, Arhgap27, Rho GTPase activating protein 27, [RH, Score=190, Expect=6e-50]} {Dmel: FBgn0032821, CdGAPr, Cd GTPase activating protein-related, [Score=103, Expect=2e-22]} {Celegans: WBGene00008006, tag-325, WW domain-containing protein tag-325, [RH, Score=163, Expect=2e-41]} {Smed: dd_Smed_v6_3975_0_1, dd_Smed_v6_3975_0_1, [RH, Score=167, Expect=2e-43]} {RNA1509_21596} {RNA1310_4539} {RNA815_2796.1}

Mlig455_030302 {REF} {Length: 5404} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=135.9]; PH domain [PF00169.31, score=19.8]} {Human: ENSG00000276836, ARHGAP27, Rho GTPase activating protein 27, [Score=166, Expect=2e-42]; ENSG00000159314, ARHGAP27, Rho GTPase activating protein 27, [Score=166, Expect=2e-42]; ENSG00000276907, ARHGAP27, Rho GTPase activating protein 27, [Score=166, Expect=2e-42]} {Mouse: ENSMUSG00000034255, Arhgap27, Rho GTPase activating protein 27, [Score=169, Expect=4e-43]} {Dmel: FBgn0029778, RhoGAP5A, Rho GTPase activating protein at 5A, [Score=95.9, Expect=2e-20]} {Celegans: WBGene00008006, tag-325, WW domain-containing protein tag-325, [RH, Score=161, Expect=5e-41]} {Smed: dd_Smed_v6_3975_0_1, dd_Smed_v6_3975_0_1, [Score=153, Expect=7e-39]} {RNA1509_17271, RNA1509_21596, RNA1509_26931, RNA1509_32589, RNA1509_32704} {RNA1310_4539, RNA1509_17271, RNA1509_21596, RNA1509_26931, RNA1509_32589, RNA1509_32704} {RNA1509_17271, RNA1509_21596, RNA1509_26931, RNA1509_32589, RNA1509_32704, RNA815_2796.1}
24. MligTC455_25035 876 18.25 Mlig455_066061

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_066061 {REF} {Length: 2528} {TRANSSPLICED} {Smed: dd_Smed_v6_7269_0_2, dd_Smed_v6_7269_0_2, [Score=62.8, Expect=3e-10]} {RNA1509_10376, RNA1509_32336} {RNA1310_6848.1, RNA1509_10376, RNA1509_32336} {RNA1509_10376, RNA1509_32336, RNA815_13828}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA