Data search
Results for MligTC455_25170
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25170 | 80 | 1.67 | Mlig455_011940 | Neo: Irradiation Age: - |
CDK6 | Mlig455_011940 {REF} {Length: 3765} {Pfam: Protein kinase domain [PF00069.27, score=169.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=105.4]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=188, Expect=6e-54]} {Mouse: ENSMUSG00000040274, Cdk6, cyclin-dependent kinase 6, [Score=187, Expect=8e-54]; ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=180, Expect=1e-51]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=179, Expect=4e-51]} {Celegans: WBGene00000407, cdk-5, Cyclin-dependent-like kinase 5, [Score=154, Expect=2e-42]} {Smed: dd_Smed_v6_6179_0_8, dd_Smed_v6_6179_0_8, [RH, Score=178, Expect=8e-48]} {RNA1509_27649} {RNA1310_27923.1} {RNA815_11639} |
Cumulative graph for MligTC455_25170
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.225 | 1.819 | 0.99957 | 1.00000 | |
| RegionR2 | 2.536 | 1.819 | 0.10302 | 0.39552 | |
| RegionR3 | 1.316 | 1.819 | 0.31089 | 0.85028 | |
| RegionR4 | 1.052 | 1.819 | 0.36355 | 0.68692 | |
| RegionR5 | 2.726 | 1.819 | 0.01219 | 0.06675 | |
| RegionR6 | 3.444 | 1.819 | 0.00354 | 0.08760 | |
| RegionR7 | -2.816 | 1.819 | 0.99978 | 1.00000 | |
| RegionR8 | -3.032 | 1.819 | 0.99981 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.729 | 1.819 | 0.99992 | 1.00000 | |
| RegenerationR2 | 1.523 | 1.819 | 0.06262 | 0.41077 | |
| RegenerationR3 | 2.008 | 1.819 | 0.04590 | 0.37337 | |
| RegenerationR4 | 1.736 | 1.819 | 0.06285 | 0.40115 | |
| RegenerationR5 | 1.7 | 1.819 | 0.01255 | 0.19766 | |
| RegenerationR6 | 0.964 | 1.819 | 0.22816 | 0.57362 | |
| RegenerationBL | 3.462 | 1.819 | 0.07622 | 0.32244 | |
| RegenerationTP | 5.28 | 1.819 | 0.03129 | 0.29684 |
Genes with expression patterns similar to MligTC455_25170
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25170 | 80 | 1.67 | Mlig455_011940 | Neo: Irradiation Age: - |
CDK6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011940 {REF} {Length: 3765} {Pfam: Protein kinase domain [PF00069.27, score=169.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=105.4]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=188, Expect=6e-54]} {Mouse: ENSMUSG00000040274, Cdk6, cyclin-dependent kinase 6, [Score=187, Expect=8e-54]; ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=180, Expect=1e-51]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=179, Expect=4e-51]} {Celegans: WBGene00000407, cdk-5, Cyclin-dependent-like kinase 5, [Score=154, Expect=2e-42]} {Smed: dd_Smed_v6_6179_0_8, dd_Smed_v6_6179_0_8, [RH, Score=178, Expect=8e-48]} {RNA1509_27649} {RNA1310_27923.1} {RNA815_11639} |
| 2. | MligTC455_13489 | 99 | 2.06 | Mlig455_052411 | Neo: Irradiation Age: - Region-enriched R5: 2.712/0.02804 |
1.832 | 0.959 | - | - | - | - | 0.873 | Mlig455_052411 {REF} {Length: 1290} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=30.9]} {RNA1509_40924} {RNA1310_26717} {RNA815_11954.1} | |
| 3. | MligTC455_32654 | 93 | 1.93 | Mlig455_038742 | Neo: - Age: Down-Up-Up Region-enriched R5: 3.441/0.00267 |
1.721 | 0.957 | - | - | - | 0.764 | - | Mlig455_038742 {REF} {Length: 2381} {TRANSSPLICED} {RNA1509_55323} {RNA1310_9315.1} {RNA815_3200.1} | |
| 4. | MligTC455_48832 | 175 | 3.64 | Mlig455_049173 | Neo: - Age: - Region-enriched R5: 2.493/0.03133 Regeneration-upregulated BL: 4.384 Regeneration-enriched BL: 4.384 |
1.702 | 0.954 | - | - | - | - | 0.748 | Mlig455_049173 {REF} {Length: 2999} {RNA1509_10362} {RNA1310_2269.1} {RNA815_8540} | |
| 5. | MligTC455_27322 | 336 | 7 | Mlig455_010205 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.326 Region-enriched R5: 1.364/0.02539 |
1.682 | - | - | - | - | 0.727 | 0.955 | Mlig455_010205 {REF} {Length: 3139} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=30.2]} {RNA1509_25391} {RNA1310_14948} {RNA815_4608.2} | |
| 6. | MligTC455_39950 | 331 | 6.9 | Mlig455_007357 | Neo: - Age: - |
LNPK | 0.967 | 0.967 | - | - | - | - | - | Mlig455_007357 {REF} {Length: 1854} {TRANSSPLICED} {Pfam: Predicted integral membrane zinc-ribbon metal-binding protein [PF10058.11, score=62.5]} {Human: ENSG00000144320, LNPK, lunapark, ER junction formation factor, [RH, Score=183, Expect=6e-53]} {Mouse: ENSMUSG00000009207, Lnpk, lunapark, ER junction formation factor, [RH, Score=191, Expect=4e-56]} {Dmel: FBgn0033309, CG8735, [RH, Score=135, Expect=1e-35]} {Celegans: WBGene00015492, lnp-1, [RH, Score=109, Expect=1e-26]} {Smed: dd_Smed_v6_6045_0_1, dd_Smed_v6_6045_0_1, [RH, Score=163, Expect=8e-47]} {RNA1509_11595} {RNA1310_15289, RNA1509_11595} {RNA1509_11595, RNA815_17259} |
| 7. | MligTC455_53477 | 156 | 3.25 | Mlig455_044952 | Neo: Int S/G2/M Age: Up-Down-Up Region-enriched R4: 3.164/0.01936 |
0.963 | 0.963 | - | - | - | - | - | Mlig455_044952 {REF} {Length: 558} {TRANSSPLICED} {RNA1509_31514} {RNA1310_26227} {RNA815_13760} | |
| 8. | MligTC455_09194 | 22 | 0.46 | Mlig455_033399 | Neo: - Age: - |
GIMAP4 | 0.959 | - | - | 0.959 | - | - | - | Mlig455_033399 {REF} {Length: 1546} {Pfam: AIG1 family [PF04548.18, score=122.9]; 50S ribosome-binding GTPase [PF01926.25, score=42.8]; Dynamin family [PF00350.25, score=29.0]; RsgA GTPase [PF03193.18, score=21.9]; Ferrous iron transport protein B [PF02421.20, score=20.2]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=95.1, Expect=7e-22]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=92.0, Expect=4e-21]; ENSMUSG00000054435, Gimap4, GTPase, IMAP family member 4, [Score=89.4, Expect=6e-20]} {RNA1310_70178} |
| 9. | MligTC455_27983 | 78 | 1.62 | Mlig455_044762 | Neo: - Age: - |
RASGRP1 | 0.954 | 0.954 | - | - | - | - | - | Mlig455_044762 {REF} {Length: 3246} {TRANSSPLICED} {Pfam: RasGEF domain [PF00617.21, score=148.4]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=47.7]; EF-hand domain [PF13405.8, score=27.2]; EF-hand domain pair [PF13499.8, score=25.2]; EF hand [PF13202.8, score=24.3]; EF hand [PF00036.34, score=23.3]} {Human: ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [RH, Score=451, Expect=3e-144]} {Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [RH, Score=442, Expect=4e-143]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [RH, Score=438, Expect=2e-140]} {Dmel: FBgn0001965, Sos, Son of sevenless, [Score=75.9, Expect=1e-13]} {Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [RH, Score=422, Expect=3e-136]} {Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [RH, Score=300, Expect=1e-93]} {RNA1509_53196} {RNA1310_11395} {RNA815_47062} |
| 10. | MligTC455_37768 | 21 | 0.43 | Mlig455_040181 | Neo: - Age: - |
GIMAP4 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_040181 {REF} {Length: 1622} {Pfam: AIG1 family [PF04548.18, score=121.3]; 50S ribosome-binding GTPase [PF01926.25, score=40.0]; Dynamin family [PF00350.25, score=29.1]; RsgA GTPase [PF03193.18, score=20.8]; AAA ATPase domain [PF13191.8, score=20.8]; ABC transporter [PF00005.29, score=20.7]; AAA domain [PF13476.8, score=19.8]; Ferrous iron transport protein B [PF02421.20, score=19.4]} {Human: ENSG00000133574, GIMAP4, GTPase, IMAP family member 4, [Score=92.8, Expect=1e-20]; ENSG00000179144, GIMAP7, GTPase, IMAP family member 7, [Score=89.4, Expect=1e-19]} {Mouse: ENSMUSG00000051124, Gimap9, GTPase, IMAP family member 9, [Score=92.4, Expect=6e-21]} {Smed: dd_Smed_v6_13631_0_6, dd_Smed_v6_13631_0_6, [RH, Score=51.6, Expect=2e-08]} {RNA1509_8439} {RNA1310_70178} {RNA815_62940} |
| 11. | MligTC455_34505 | 332 | 6.92 | Mlig455_056584, Mlig455_056605 | Neo: Int S/G2/M Age: - Region-enriched R5: 3.021/0.00055 |
SLBP | 0.953 | 0.953 | - | - | - | - | - | Mlig455_056584 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} Mlig455_056605 {REF} {Length: 2903} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079} |
| 12. | MligTC455_21154 | 267 | 5.56 | Mlig455_022699 | Neo: - |
TDP1 | 0.952 | 0.952 | - | - | - | - | - | Mlig455_022699 {REF} {Length: 1087} {TRANSSPLICED} {Pfam: Tyrosyl-DNA phosphodiesterase [PF06087.14, score=257.3]} {Human: ENSG00000042088, TDP1, tyrosyl-DNA phosphodiesterase 1, [Score=229, Expect=8e-70]} {Mouse: ENSMUSG00000021177, Tdp1, tyrosyl-DNA phosphodiesterase 1, [Score=231, Expect=9e-71]} {Dmel: FBgn0260817, gkt, glaikit, [Score=133, Expect=1e-34]} {Celegans: WBGene00018678, F52C12.1, Probable tyrosyl-DNA phosphodiesterase, [Score=136, Expect=1e-37]} {Smed: dd_Smed_v6_8311_0_2, dd_Smed_v6_8311_0_2, [Score=213, Expect=2e-65]} {RNA1509_23990} {RNA1310_16623.1} {RNA815_4794} |
| 13. | MligTC455_15389 | 145 | 3.02 | Mlig455_050920 | Neo: - Age: Up-Down-Down |
SLC26A11 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_050920 {REF} {Length: 4277} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=307.6]; STAS domain [PF01740.23, score=35.5]} {Human: ENSG00000181045, SLC26A11, solute carrier family 26 member 11, [Score=384, Expect=3e-126]} {Mouse: ENSMUSG00000039908, Slc26a11, solute carrier family 26, member 11, [RH, Score=389, Expect=2e-128]} {Dmel: FBgn0013953, Esp, Epidermal stripes and patches, [Score=305, Expect=3e-95]} {Celegans: WBGene00010789, sulp-5, SULfate Permease family, [Score=161, Expect=5e-42]} {Smed: dd_Smed_v6_7104_0_1, dd_Smed_v6_7104_0_1, [Score=372, Expect=3e-122]} {RNA1509_16136} {RNA1310_7632.2} {RNA815_4171} |
| 14. | MligTC455_35054 | 723 | 15.06 | Mlig455_030811 | Neo: - Age: Down-Down-Down Region-enriched R5: 2.153/0.00000 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_030811 {REF} {Length: 2772} {RNA1509_15774, RNA1509_41434, RNA1509_44133} {RNA1310_40148, RNA1509_41434, RNA1509_44133} {RNA1509_41434, RNA1509_44133, RNA815_10781} |
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