Data search
Results for MligTC455_27322
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_27322 | 336 | 7.00 | Mlig455_010205 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.326 Region-enriched R5: 1.364/0.02539 |
Mlig455_010205 {REF} {Length: 3139} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=30.2]} {RNA1509_25391} {RNA1310_14948} {RNA815_4608.2} |
Cumulative graph for MligTC455_27322
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.36 | 3.185 | 0.81996 | 1.00000 | |
| RegionR2 | -0.185 | 3.185 | 0.79080 | 1.00000 | |
| RegionR3 | -0.7 | 3.185 | 0.24302 | 0.78575 | |
| RegionR4 | -1.237 | 3.185 | 0.07336 | 0.25004 | |
| RegionR5 | 1.364 | 3.185 | 0.00330 | 0.02539 | |
| RegionR6 | -0.17 | 3.185 | 0.77425 | 1.00000 | |
| RegionR7 | -0.422 | 3.185 | 0.59802 | 1.00000 | |
| RegionR8 | 1.709 | 3.185 | 0.01702 | 0.25362 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.155 | 3.185 | 0.22992 | 0.96026 | |
| RegenerationR2 | -0.358 | 3.185 | 0.55456 | 0.89549 | |
| RegenerationR3 | 0.211 | 3.185 | 0.76577 | 0.96985 | |
| RegenerationR4 | 0.545 | 3.185 | 0.40851 | 0.81945 | |
| RegenerationR5 | -0.502 | 3.185 | 0.36450 | 0.77515 | |
| RegenerationR6 | 0.244 | 3.185 | 0.72010 | 0.93558 | |
| RegenerationBL | -0.056 | 3.185 | 0.93637 | 1.00000 | |
| RegenerationTP | -1.518 | 3.185 | 0.08138 | 0.45301 |
Genes with expression patterns similar to MligTC455_27322
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_27322 | 336 | 7 | Mlig455_010205 | Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.326 Region-enriched R5: 1.364/0.02539 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_010205 {REF} {Length: 3139} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=30.2]} {RNA1509_25391} {RNA1310_14948} {RNA815_4608.2} | |
| 2. | MligTC455_31252 | 894 | 18.62 | Mlig455_016030, Mlig455_054951, Mlig455_054965 | Neo: Int S/G2/M Age: Up-Down-Down Region-enriched R5: 1.348/0.03896 |
1.804 | - | - | - | - | 0.953 | 0.851 | Mlig455_016030 {REF} {Length: 7387} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1} Mlig455_054951 {REF} {Length: 7408} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=42.1]} {RNA1509_4327} {RNA1310_538, RNA1509_4327} {RNA1509_4327, RNA815_243.1} Mlig455_054965 {REF} {Length: 8214} {TRANSSPLICED} {Pfam: Rough deal protein C-terminal region [PF10493.11, score=41.8]} {RNA1509_4327} {RNA1310_538} {RNA815_243.1} |
|
| 3. | MligTC455_35052 | 956 | 19.92 | Mlig455_026883 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.600 Region-enriched R5: 1.591/0.00000 |
1.69 | - | - | - | - | 0.732 | 0.958 | Mlig455_026883 {REF} {Length: 5250} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=18.7]} {RNA1509_18110} {RNA1310_20306} {RNA815_4730} | |
| 4. | MligTC455_47154 | 279 | 5.81 | Mlig455_066392 | Neo: Irradiation Age: logFC(26M/2M)=0.433 Region-enriched R5: 1.675/0.00126 |
1.688 | - | - | - | - | 0.732 | 0.956 | Mlig455_066392 {REF} {Length: 2177} {TRANSSPLICED} {RNA1509_49834} {RNA1310_23122.1, RNA1509_49834} {RNA1509_49834, RNA815_6971.1} | |
| 5. | MligTC455_25170 | 80 | 1.67 | Mlig455_011940 | Neo: Irradiation Age: - |
CDK6 | 1.682 | - | - | - | - | 0.727 | 0.955 | Mlig455_011940 {REF} {Length: 3765} {Pfam: Protein kinase domain [PF00069.27, score=169.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=105.4]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=188, Expect=6e-54]} {Mouse: ENSMUSG00000040274, Cdk6, cyclin-dependent kinase 6, [Score=187, Expect=8e-54]; ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=180, Expect=1e-51]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=179, Expect=4e-51]} {Celegans: WBGene00000407, cdk-5, Cyclin-dependent-like kinase 5, [Score=154, Expect=2e-42]} {Smed: dd_Smed_v6_6179_0_8, dd_Smed_v6_6179_0_8, [RH, Score=178, Expect=8e-48]} {RNA1509_27649} {RNA1310_27923.1} {RNA815_11639} |
| 6. | MligTC455_47155 | 284 | 5.91 | Mlig455_067890 | Neo: - Age: Up-Up-Down Region-enriched R5: 1.653/0.00140 |
1.682 | - | - | - | - | 0.732 | 0.950 | Mlig455_067890 {REF} {Length: 5369} {TRANSSPLICED} {RNA1509_29931} {RNA1310_4796} {RNA815_1232} | |
| 7. | MligTC455_53645 | 230 | 4.79 | Mlig455_056853 | Neo: Irradiation Age: Up-Down-Up Region-enriched R5: 2.305/0.00036 Regeneration-upregulated R4: 3.325 Regeneration-enriched R4: 3.325 |
MYO9A | 1.672 | - | - | - | - | 0.711 | 0.961 | Mlig455_056853 {REF} {Length: 3207} {Pfam: RhoGAP domain [PF00620.29, score=92.6]} {Human: ENSG00000066933, MYO9A, myosin IXA, [Score=73.9, Expect=8e-13]} {Mouse: ENSMUSG00000039585, Myo9a, myosin IXa, [Score=72.8, Expect=2e-12]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=67.8, Expect=2e-11]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=73.2, Expect=6e-13]} {Smed: dd_Smed_v6_6129_0_1, dd_Smed_v6_6129_0_1, [Score=62.8, Expect=6e-10]} {RNA1310_25774} {RNA815_32981} |
| 8. | MligTC455_35054 | 723 | 15.06 | Mlig455_030811 | Neo: - Age: Down-Down-Down Region-enriched R5: 2.153/0.00000 |
0.983 | - | - | - | - | - | 0.983 | Mlig455_030811 {REF} {Length: 2772} {RNA1509_15774, RNA1509_41434, RNA1509_44133} {RNA1310_40148, RNA1509_41434, RNA1509_44133} {RNA1509_41434, RNA1509_44133, RNA815_10781} | |
| 9. | MligTC455_35053 | 719 | 14.99 | Mlig455_030771 | Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=-0.400 Region-enriched R5: 2.154/0.00000 |
0.971 | - | - | - | - | - | 0.971 | Mlig455_030771 {REF} {Length: 3903} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=35.3]} {RNA1509_18110} {RNA1310_20306} {RNA815_4730} | |
| 10. | MligTC455_37474 | 1971 | 41.07 | Mlig455_068208 | Neo: Irradiation Age: logFC(26M/2M)=0.269 Region-enriched R5: 1.690/0.00000 Regeneration-upregulated BL: 1.658 Regeneration-enriched BL: 1.658 |
MEX3D | 0.97 | - | - | - | - | - | 0.970 | Mlig455_068208 {REF} {Length: 4603} {Pfam: KH domain [PF00013.31, score=76.2]; KH domain [PF07650.19, score=23.0]; NusA-like KH domain [PF13184.8, score=20.7]; KH domain [PF13083.8, score=20.2]} {Human: ENSG00000181588, MEX3D, mex-3 RNA binding family member D, [RH, Score=118, Expect=2e-27]; ENSG00000183496, MEX3B, mex-3 RNA binding family member B, [RH, Score=114, Expect=3e-26]} {Mouse: ENSMUSG00000048696, Mex3d, mex3 RNA binding family member D, [RH, Score=119, Expect=7e-28]; ENSMUSG00000057706, Mex3b, mex3 RNA binding family member B, [RH, Score=114, Expect=2e-26]} {Dmel: FBgn0039920, CG11360, [RH, Score=108, Expect=8e-25]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [RH, Score=114, Expect=2e-27]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [RH, Score=69.7, Expect=2e-12]} {RNA1509_1233, RNA1509_13866} {RNA1310_1669, RNA1509_1233, RNA1509_13866} {RNA1509_1233, RNA1509_13866, RNA815_2420} |
| 11. | MligTC455_13784 | 43 | 0.89 | Mlig455_031300 | Neo: Int S/G2/M Age: Down-Down-Up |
MAP3K19 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_031300 {REF} {Length: 3878} {Pfam: Protein kinase domain [PF00069.27, score=168.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=144.4]; Ankyrin repeats (3 copies) [PF12796.9, score=112.4]; Ankyrin repeats (many copies) [PF13637.8, score=105.5]; Ankyrin repeat [PF13606.8, score=55.6]; Ankyrin repeats (many copies) [PF13857.8, score=48.6]; Ankyrin repeat [PF00023.32, score=43.4]; ABC1 atypical kinase-like domain [PF03109.18, score=29.7]; Fungal protein kinase [PF17667.3, score=24.2]; Kinase-like [PF14531.8, score=21.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=164, Expect=7e-43]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=156, Expect=3e-40]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=133, Expect=1e-31]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=112, Expect=3e-26]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=137, Expect=4e-33]} {RNA1509_41875, RNA1509_45057} {RNA1310_5347, RNA1509_45057} {RNA1509_45057, RNA815_6635.1} |
| 12. | MligTC455_41597 | 477 | 9.95 | Mlig455_034864 | Neo: Irradiation Age: - Region-enriched R5: 1.529/0.01815 |
DBR1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_034864 {REF} {Length: 3022} {TRANSSPLICED} {Pfam: Lariat debranching enzyme, C-terminal domain [PF05011.15, score=105.1]; Calcineurin-like phosphoesterase [PF00149.30, score=42.5]; Calcineurin-like phosphoesterase superfamily domain [PF12850.9, score=18.7]} {Human: ENSG00000138231, DBR1, debranching RNA lariats 1, [RH, Score=451, Expect=6e-152]} {Mouse: ENSMUSG00000032469, Dbr1, debranching RNA lariats 1, [RH, Score=441, Expect=8e-148]} {Dmel: FBgn0035838, ldbr, lariat debranching enzyme, [RH, Score=403, Expect=2e-133]} {Celegans: WBGene00000937, dbr-1, Lariat debranching enzyme, [RH, Score=336, Expect=4e-108]} {Smed: dd_Smed_v6_3274_0_1, dd_Smed_v6_3274_0_1, [RH, Score=432, Expect=3e-145]} {RNA1509_17923} {RNA1310_9562} {RNA815_3214.1} |
| 13. | MligTC455_22089 | 90 | 1.87 | Mlig455_003176 | Neo: Irradiation Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_003176 {REF} {Length: 3783} {TRANSSPLICED} {RNA1509_23005} {RNA1310_11644.1} {RNA815_1539.2} | |
| 14. | MligTC455_36934 | 163 | 3.4 | Mlig455_051431 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_051431 {REF} {Length: 1109} {NoTransDecoderORF} {RNA1509_11440} {RNA1310_40281} {RNA815_24374.1} |
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