Data search
Results for MligTC455_48832
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48832 | 175 | 3.64 | Mlig455_049173 | Neo: - Age: - Region-enriched R5: 2.493/0.03133 Regeneration-upregulated BL: 4.384 Regeneration-enriched BL: 4.384 |
Mlig455_049173 {REF} {Length: 2999} {RNA1509_10362} {RNA1310_2269.1} {RNA815_8540} |
Cumulative graph for MligTC455_48832
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.728 | 2.51 | 1.00000 | 1.00000 | |
| RegionR2 | 0.394 | 2.51 | 0.63416 | 0.97394 | |
| RegionR3 | 1.172 | 2.51 | 0.29099 | 0.83355 | |
| RegionR4 | 2.497 | 2.51 | 0.04433 | 0.17772 | |
| RegionR5 | 2.493 | 2.51 | 0.00438 | 0.03133 | |
| RegionR6 | 1.357 | 2.51 | 0.22573 | 0.80740 | |
| RegionR7 | -0.735 | 2.51 | 0.90810 | 1.00000 | |
| RegionR8 | -4.45 | 2.51 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.783 | 2.51 | 0.53964 | 1.00000 | |
| RegenerationR2 | 0.679 | 2.51 | 0.26193 | 0.70869 | |
| RegenerationR3 | 0.705 | 2.51 | 0.32640 | 0.75331 | |
| RegenerationR4 | 0.546 | 2.51 | 0.49643 | 0.86728 | |
| RegenerationR5 | 0.604 | 2.51 | 0.30815 | 0.73472 | |
| RegenerationR6 | 0.563 | 2.51 | 0.44488 | 0.76722 | |
| RegenerationBL | 4.384 | 2.51 | 0.00008 | 0.00385 | Specific for BL: 4.384 |
| RegenerationTP | 2.758 | 2.51 | 0.19516 | 0.63409 |
Genes with expression patterns similar to MligTC455_48832
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48832 | 175 | 3.64 | Mlig455_049173 | Neo: - Age: - Region-enriched R5: 2.493/0.03133 Regeneration-upregulated BL: 4.384 Regeneration-enriched BL: 4.384 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049173 {REF} {Length: 2999} {RNA1509_10362} {RNA1310_2269.1} {RNA815_8540} | |
| 2. | MligTC455_30067 | 152 | 3.17 | Mlig455_008162 | Neo: - Age: - |
1.824 | 0.958 | - | - | 0.866 | - | - | Mlig455_008162 {REF} {Length: 4500} {TRANSSPLICED} {RNA1509_32679} {RNA1310_14141.1} {RNA815_4925.2} | |
| 3. | MligTC455_41746 | 366 | 7.63 | Mlig455_015645 | Neo: - Age: - Region-enriched R5: 1.817/0.00944 |
SAMD4B | 1.774 | - | - | - | 0.811 | - | 0.963 | Mlig455_015645 {REF} {Length: 3750} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=30.4]} {Human: ENSG00000179134, SAMD4B, sterile alpha motif domain containing 4B, [RH, Score=120, Expect=5e-28]} {Mouse: ENSMUSG00000109336, Samd4b, sterile alpha motif domain containing 4B, [RH, Score=116, Expect=5e-27]} {Dmel: FBgn0016070, smg, smaug, [RH, Score=79.7, Expect=3e-15]} {Celegans: WBGene00022538, ZC190.4, [RH, Score=80.1, Expect=1e-15]} {Smed: dd_Smed_v6_6923_0_1, dd_Smed_v6_6923_0_1, [RH, Score=145, Expect=5e-38]} {RNA1509_33258, RNA1509_52855, RNA1509_54805, RNA1509_59930} {RNA1310_14232, RNA1509_33258, RNA1509_52855, RNA1509_54805, RNA1509_59930} {RNA1509_33258, RNA1509_52855, RNA1509_54805, RNA1509_59930, RNA815_10563} |
| 4. | MligTC455_49080 | 427 | 8.9 | Mlig455_053818 | Neo: - Age: Down-Up-Down |
CANX | 1.748 | - | - | - | 0.789 | - | 0.959 | Mlig455_053818 {REF} {Length: 2119} {TRANSSPLICED} {Pfam: Calreticulin family [PF00262.20, score=472.5]} {Human: ENSG00000127022, CANX, calnexin, [Score=481, Expect=8e-164]; ENSG00000283777, CANX, calnexin, [Score=481, Expect=8e-164]} {Mouse: ENSMUSG00000020368, Canx, calnexin, [Score=471, Expect=6e-160]} {Dmel: FBgn0015622, Cnx99A, Calnexin 99A, [Score=409, Expect=7e-136]} {Celegans: WBGene00000567, cnx-1, Calnexin, [Score=399, Expect=9e-132]} {Smed: dd_Smed_v6_632_0_1, dd_Smed_v6_632_0_1, [Score=524, Expect=0.0]} {RNA1509_13172, RNA1509_44465, RNA1509_45014, RNA1509_58386} {RNA1310_13618.1, RNA1509_13172, RNA1509_44465, RNA1509_45014, RNA1509_58386} {RNA1509_13172, RNA1509_44465, RNA1509_45014, RNA1509_58386, RNA815_14640} |
| 5. | MligTC455_25170 | 80 | 1.67 | Mlig455_011940 | Neo: Irradiation Age: - |
CDK6 | 1.702 | 0.954 | - | - | - | - | 0.748 | Mlig455_011940 {REF} {Length: 3765} {Pfam: Protein kinase domain [PF00069.27, score=169.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=105.4]} {Human: ENSG00000105810, CDK6, cyclin dependent kinase 6, [Score=188, Expect=6e-54]} {Mouse: ENSMUSG00000040274, Cdk6, cyclin-dependent kinase 6, [Score=187, Expect=8e-54]; ENSMUSG00000006728, Cdk4, cyclin-dependent kinase 4, [Score=180, Expect=1e-51]} {Dmel: FBgn0016131, Cdk4, Cyclin-dependent kinase 4, [Score=179, Expect=4e-51]} {Celegans: WBGene00000407, cdk-5, Cyclin-dependent-like kinase 5, [Score=154, Expect=2e-42]} {Smed: dd_Smed_v6_6179_0_8, dd_Smed_v6_6179_0_8, [RH, Score=178, Expect=8e-48]} {RNA1509_27649} {RNA1310_27923.1} {RNA815_11639} |
| 6. | MligTC455_16959 | 503 | 10.48 | Mlig455_017298, Mlig455_045283 | Neo: - Age: Down-Up-Up |
CFAP410 | 1.696 | - | - | 0.736 | 0.960 | - | - | Mlig455_017298 {REF} {Length: 1549} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=50.7]; Leucine-rich repeat [PF14580.8, score=42.0]; Leucine rich repeat [PF13855.8, score=21.5]} {Human: ENSG00000160226, CFAP410, cilia and flagella associated protein 410, [Score=117, Expect=6e-31]} {Mouse: ENSMUSG00000020284, 1810043G02Rik, RIKEN cDNA 1810043G02 gene, [Score=115, Expect=2e-30]} {Dmel: FBgn0035497, CG14995, [RH, Score=99.0, Expect=3e-23]} {Celegans: WBGene00017320, F09G8.5, [Score=92.8, Expect=6e-21]} {Smed: dd_Smed_v6_14559_0_1, dd_Smed_v6_14559_0_1, [Score=95.1, Expect=1e-22]} {RNA1509_23161} {RNA1310_16070} {RNA815_23247} Mlig455_045283 {REF} {Length: 1891} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=49.8]; Leucine-rich repeat [PF14580.8, score=42.5]; Leucine rich repeat [PF13855.8, score=21.3]} {Human: ENSG00000160226, CFAP410, cilia and flagella associated protein 410, [RH, Score=143, Expect=7e-39]} {Mouse: ENSMUSG00000020284, 1810043G02Rik, RIKEN cDNA 1810043G02 gene, [RH, Score=138, Expect=1e-38]} {Dmel: FBgn0035497, CG14995, [RH, Score=118, Expect=2e-29]} {Celegans: WBGene00017320, F09G8.5, [RH, Score=107, Expect=1e-25]} {Smed: dd_Smed_v6_14559_0_1, dd_Smed_v6_14559_0_1, [RH, Score=115, Expect=2e-29]} {RNA1509_23161, RNA1509_50838} {RNA1310_16070, RNA1509_23161, RNA1509_50838} {RNA1509_23161, RNA1509_50838, RNA815_17886} |
| 7. | MligTC455_45512 | 799 | 16.65 | Mlig455_024821 | Neo: - Age: - |
CLINT1 | 0.986 | - | - | - | 0.986 | - | - | Mlig455_024821 {REF} {Length: 5002} {Pfam: ENTH domain [PF01417.22, score=141.6]; ANTH domain [PF07651.18, score=19.3]} {Human: ENSG00000113282, CLINT1, clathrin interactor 1, [RH, Score=251, Expect=2e-74]} {Mouse: ENSMUSG00000006169, Clint1, clathrin interactor 1, [RH, Score=250, Expect=2e-74]} {Dmel: FBgn0261279, lqfR, liquid facets-Related, [RH, Score=254, Expect=7e-76]} {Celegans: WBGene00004682, rsd-3, [RH, Score=163, Expect=1e-43]} {Smed: dd_Smed_v6_1065_0_1, dd_Smed_v6_1065_0_1, [RH, Score=217, Expect=8e-64]} {RNA1509_15790, RNA1509_41864, RNA1509_6363} {RNA1310_5552, RNA1509_15790, RNA1509_41864} {RNA1509_15790, RNA1509_41864, RNA815_1630.1} |
| 8. | MligTC455_39802 | 144 | 3 | Mlig455_018704 | Neo: - Age: Down-Up-Up |
NDUFAF3 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_018704 {REF} {Length: 1152} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF498/DUF598) [PF04430.16, score=76.3]} {Human: ENSG00000178057, NDUFAF3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=76.3, Expect=4e-16]} {Mouse: ENSMUSG00000070283, Ndufaf3, NADH:ubiquinone oxidoreductase complex assembly factor 3, [RH, Score=73.2, Expect=4e-15]} {Dmel: FBgn0034919, CG5569, [RH, Score=105, Expect=5e-27]} {Celegans: WBGene00011123, nuaf-3, NADH:Ubiquinone oxidoreductase Assembly Factor, [RH, Score=105, Expect=1e-26]} {Smed: dd_Smed_v6_4891_0_1, dd_Smed_v6_4891_0_1, [RH, Score=110, Expect=2e-28]} {RNA1509_13305} {RNA1310_30623} {RNA815_13719} |
| 9. | MligTC455_16742 | 453 | 9.44 | Mlig455_066823 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.524 Region-enriched R5: 1.126/0.00482 |
NF2 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_066823 {REF} {Length: 3854} {TRANSSPLICED} {Pfam: CDK5 regulatory subunit-associated protein 3 [PF05600.14, score=309.6]; FERM C-terminal PH-like domain [PF09380.12, score=49.8]; FERM N-terminal domain [PF09379.12, score=39.5]; FERM central domain [PF00373.20, score=32.1]; Ezrin/radixin/moesin family [PF00769.21, score=28.3]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=234, Expect=2e-65]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=236, Expect=3e-66]} {Dmel: FBgn0086384, Mer, Merlin, [Score=240, Expect=1e-67]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=210, Expect=5e-58]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [Score=193, Expect=2e-52]} {RNA1509_28763} {RNA1310_9789} {RNA815_6590} |
| 10. | MligTC455_16741 | 471 | 9.8 | Mlig455_064961 | Neo: - Age: - Region-enriched R5: 1.080/0.00696 |
NF2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_064961 {REF} {Length: 2815} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=50.8]; FERM N-terminal domain [PF09379.12, score=46.2]; FERM central domain [PF00373.20, score=33.2]; Ezrin/radixin/moesin family [PF00769.21, score=30.2]} {Human: ENSG00000186575, NF2, neurofibromin 2, [Score=248, Expect=2e-73]} {Mouse: ENSMUSG00000009073, Nf2, neurofibromin 2, [Score=250, Expect=2e-74]} {Dmel: FBgn0086384, Mer, Merlin, [Score=259, Expect=2e-77]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [Score=222, Expect=2e-64]} {Smed: dd_Smed_v6_1131_0_1, dd_Smed_v6_1131_0_1, [Score=206, Expect=9e-59]} {RNA1509_28763, RNA1509_43567} {RNA1310_9789, RNA1509_28763, RNA1509_43567} {RNA1509_28763, RNA1509_43567, RNA815_21216} |
| 11. | MligTC455_51550 | 460 | 9.59 | Mlig455_039217, Mlig455_053903 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.915 Region-enriched R2: 2.333/0.04047 |
0.955 | - | - | - | - | - | 0.955 | Mlig455_039217 {REF} {Length: 1773} {TRANSSPLICED} {RNA1509_28709} {RNA1310_23779.1, RNA1509_28709} {RNA1509_28709, RNA815_36053} Mlig455_053903 {REF} {Length: 1761} {TRANSSPLICED} {RNA1509_28709} {RNA1310_23779.1} {RNA815_36053} |
|
| 12. | MligTC455_25171 | 260 | 5.42 | Mlig455_068373 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.564/0.00118 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_068373 {REF} {Length: 554} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_27649} {RNA1310_34727.2} {RNA815_19653} | |
| 13. | MligTC455_49675 | 731 | 15.24 | Mlig455_010609 | Neo: - Age: Down-Up-Up |
SHF | 0.953 | - | - | - | 0.953 | - | - | Mlig455_010609 {REF} {Length: 3411} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=38.9]} {Human: ENSG00000138606, SHF, Src homology 2 domain containing F, [Score=92.0, Expect=7e-21]; ENSG00000105251, SHD, Src homology 2 domain containing transforming protein D, [Score=91.7, Expect=5e-21]} {Mouse: ENSMUSG00000033256, Shf, Src homology 2 domain containing F, [Score=90.9, Expect=4e-21]} {Dmel: FBgn0264542, hwt, heavyweight, [Score=107, Expect=4e-26]} {Smed: dd_Smed_v6_2710_0_1, dd_Smed_v6_2710_0_1, [Score=94.4, Expect=5e-22]} {RNA1509_25407, RNA1509_43439} {RNA1310_33381, RNA1509_25407, RNA1509_43439} {RNA1509_25407, RNA1509_43439, RNA815_11332} |
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