Data search
Results for MligTC455_25210
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25210 | 915 | 19.07 | Mlig455_036995 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.268 |
PUM2 | Mlig455_036995 {REF} {Length: 5241} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=284.7]; CPL (NUC119) domain [PF08144.13, score=20.0]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=538, Expect=4e-176]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=529, Expect=3e-173]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=538, Expect=3e-176]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=514, Expect=5e-162]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=396, Expect=1e-125]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [Score=524, Expect=4e-172]} {RNA1509_51688, RNA1509_8552} {RNA1310_4745.1, RNA1509_51688, RNA1509_8552} {RNA1509_51688, RNA1509_8552, RNA815_8885} |
Cumulative graph for MligTC455_25210
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.18 | 4.475 | 0.82251 | 1.00000 | |
| RegionR2 | -0.473 | 4.475 | 0.27205 | 0.65665 | |
| RegionR3 | -0.034 | 4.475 | 0.92388 | 1.00000 | |
| RegionR4 | 0.212 | 4.475 | 0.59242 | 0.90704 | |
| RegionR5 | -0.02 | 4.475 | 0.95402 | 1.00000 | |
| RegionR6 | 0.194 | 4.475 | 0.58155 | 1.00000 | |
| RegionR7 | 0.549 | 4.475 | 0.16300 | 0.74541 | |
| RegionR8 | -0.249 | 4.475 | 0.64132 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.057 | 4.475 | 0.01602 | 0.53186 | |
| RegenerationR2 | 0.02 | 4.475 | 0.96115 | 1.00000 | |
| RegenerationR3 | -0.409 | 4.475 | 0.34385 | 0.76748 | |
| RegenerationR4 | -0.287 | 4.475 | 0.50555 | 0.87206 | |
| RegenerationR5 | -0.118 | 4.475 | 0.77222 | 0.97982 | |
| RegenerationR6 | -0.365 | 4.475 | 0.40058 | 0.73767 | |
| RegenerationBL | -0.465 | 4.475 | 0.31986 | 0.68721 | |
| RegenerationTP | 0.237 | 4.475 | 0.61302 | 0.96830 |
Genes with expression patterns similar to MligTC455_25210
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25210 | 915 | 19.07 | Mlig455_036995 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.268 |
PUM2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036995 {REF} {Length: 5241} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=284.7]; CPL (NUC119) domain [PF08144.13, score=20.0]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=538, Expect=4e-176]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=529, Expect=3e-173]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=538, Expect=3e-176]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=514, Expect=5e-162]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=396, Expect=1e-125]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [Score=524, Expect=4e-172]} {RNA1509_51688, RNA1509_8552} {RNA1310_4745.1, RNA1509_51688, RNA1509_8552} {RNA1509_51688, RNA1509_8552, RNA815_8885} |
| 2. | MligTC455_48739 | 254 | 5.3 | Mlig455_039583 | Neo: - |
USP15 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_039583 {REF} {Length: 985} {TRANSSPLICED} {Pfam: DUSP domain [PF06337.14, score=62.6]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=120, Expect=3e-33]} {Mouse: ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [Score=119, Expect=1e-30]} {RNA1509_25487} {RNA1310_32431} {RNA815_1764.4} |
| 3. | MligTC455_47695 | 1505 | 31.36 | Mlig455_043323 | Neo: - Age: Up-Down-Down Regeneration-upregulated R5: 1.244 Regeneration-enriched R5: 1.244 |
SRRM1 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_043323 {REF} {Length: 3649} {Pfam: PWI domain [PF01480.19, score=81.0]} {Human: ENSG00000133226, SRRM1, serine and arginine repetitive matrix 1, [RH, Score=181, Expect=6e-47]} {Mouse: ENSMUSG00000028809, Srrm1, serine/arginine repetitive matrix 1, [RH, Score=182, Expect=2e-47]} {Dmel: FBgn0036340, SRm160, [RH, Score=167, Expect=1e-42]} {Celegans: WBGene00004706, rsr-1, SR protein related, [Score=158, Expect=2e-40]} {Smed: dd_Smed_v6_3886_0_1, dd_Smed_v6_3886_0_1, [Score=167, Expect=3e-43]} {RNA1509_17016} {RNA1310_2757.1} {RNA815_383.1} |
| 4. | MligTC455_23258 | 1533 | 31.94 | Mlig455_048752 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_048752 {REF} {Length: 2090} {TRANSSPLICED} {Pfam: Flagella accessory protein C (FlaC) [PF05377.13, score=19.2]; Weak chloroplast movement under blue light [PF05701.13, score=17.4]} {RNA1509_25043, RNA1509_30520, RNA1509_56657} {RNA1310_12993.1, RNA1509_30520, RNA1509_56657} {RNA1509_30520, RNA1509_56657, RNA815_2932.1} |
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