TomoSeq data search

Data search

Results for MligTC455_48739

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_48739	254	5.30	Mlig455_039583	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.287	USP15	Mlig455_039583 {REF} {Length: 985} {TRANSSPLICED} {Pfam: DUSP domain [PF06337.14, score=62.6]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=120, Expect=3e-33]} {Mouse: ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [Score=119, Expect=1e-30]} {RNA1509_25487} {RNA1310_32431} {RNA815_1764.4}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_48739

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.521	2.979	0.23835	0.88370
RegionR2	1.565	2.979	0.02905	0.19248
RegionR3	0.831	2.979	0.19527	0.73355
RegionR4	0.666	2.979	0.27514	0.58169
RegionR5	0.338	2.979	0.57508	0.93331
RegionR6	0.825	2.979	0.21408	0.79246
RegionR7	1.019	2.979	0.20128	0.80964
RegionR8	-2.724	2.979	0.12220	0.64255

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.87	2.979	0.56217	1.00000
RegenerationR2	-0.376	2.979	0.42439	0.83053
RegenerationR3	0.471	2.979	0.38024	0.79061
RegenerationR4	0.046	2.979	0.93013	1.00000
RegenerationR5	0.267	2.979	0.59340	0.90703
RegenerationR6	-0.017	2.979	0.97690	1.00000
RegenerationBL	0.965	2.979	0.28777	0.64938
RegenerationTP	1.98	2.979	0.05547	0.38313

Genes with expression patterns similar to MligTC455_48739

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48739	254	5.3	Mlig455_039583	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.287	USP15	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039583 {REF} {Length: 985} {TRANSSPLICED} {Pfam: DUSP domain [PF06337.14, score=62.6]} {Human: ENSG00000135655, USP15, ubiquitin specific peptidase 15, [Score=120, Expect=3e-33]} {Mouse: ENSMUSG00000020124, Usp15, ubiquitin specific peptidase 15, [Score=119, Expect=1e-30]} {RNA1509_25487} {RNA1310_32431} {RNA815_1764.4}
2.	MligTC455_25210	915	19.07	Mlig455_036995	Neo: Int S/G2/M Age: logFC(26M/2M)=0.268	PUM2	0.965	-	-	-	-	0.965	-	Mlig455_036995 {REF} {Length: 5241} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=284.7]; CPL (NUC119) domain [PF08144.13, score=20.0]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=538, Expect=4e-176]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=529, Expect=3e-173]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=538, Expect=3e-176]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=514, Expect=5e-162]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=396, Expect=1e-125]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [Score=524, Expect=4e-172]} {RNA1509_51688, RNA1509_8552} {RNA1310_4745.1, RNA1509_51688, RNA1509_8552} {RNA1509_51688, RNA1509_8552, RNA815_8885}
3.	MligTC455_19770	2036	42.41	Mlig455_044236, Mlig455_044255	Neo: Int S/G2/M Age: - Region-enriched R5: 1.412/0.00042 Region-enriched R4: 1.323/0.00806	VMA21	0.953	-	-	-	-	0.953	-	Mlig455_044236 {REF} {Length: 791} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.1} {RNA815_21706.1} Mlig455_044255 {REF} {Length: 805} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.2} {RNA815_21706.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_48739

254

5.3

Mlig455_039583

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.287

USP15

1.000

MligTC455_25210

915

19.07

Mlig455_036995

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.268

PUM2

0.965

Mlig455_036995 {REF} {Length: 5241} {TRANSSPLICED} {Pfam: Pumilio-family RNA binding repeat [PF00806.21, score=284.7]; CPL (NUC119) domain [PF08144.13, score=20.0]} {Human: ENSG00000055917, PUM2, pumilio RNA binding family member 2, [RH, Score=538, Expect=4e-176]; ENSG00000134644, PUM1, pumilio RNA binding family member 1, [RH, Score=529, Expect=3e-173]} {Mouse: ENSMUSG00000020594, Pum2, pumilio RNA-binding family member 2, [RH, Score=538, Expect=3e-176]; ENSMUSG00000106966, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]; ENSMUSG00000028580, Pum1, pumilio RNA-binding family member 1, [RH, Score=530, Expect=2e-173]} {Dmel: FBgn0003165, pum, pumilio, [RH, Score=514, Expect=5e-162]} {Celegans: WBGene00004245, puf-9, PUF (Pumilio/FBF) domain-containing, [RH, Score=396, Expect=1e-125]} {Smed: dd_Smed_v6_1677_0_1, dd_Smed_v6_1677_0_1, [Score=524, Expect=4e-172]} {RNA1509_51688, RNA1509_8552} {RNA1310_4745.1, RNA1509_51688, RNA1509_8552} {RNA1509_51688, RNA1509_8552, RNA815_8885}

MligTC455_19770

2036

42.41

Mlig455_044236, Mlig455_044255

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.412/0.00042
Region-enriched R4: 1.323/0.00806

VMA21

0.953

Mlig455_044236 {REF} {Length: 791} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.1} {RNA815_21706.1}

Mlig455_044255 {REF} {Length: 805} {TRANSSPLICED} {Pfam: VMA21-like domain [PF09446.12, score=52.4]} {Human: ENSG00000160131, VMA21, VMA21, vacuolar ATPase assembly factor, [Score=45.4, Expect=1e-06]} {Mouse: ENSMUSG00000073131, Vma21, VMA21 vacuolar H+-ATPase homolog (S. cerevisiae), [Score=43.5, Expect=3e-06]} {Celegans: WBGene00011116, pdcd-2, Vacuolar ATPase assembly integral membrane protein VMA21 homolog, [RH, Score=50.8, Expect=2e-09]} {Smed: dd_Smed_v6_2976_0_1, dd_Smed_v6_2976_0_1, [Score=48.1, Expect=1e-08]} {RNA1509_19501} {RNA1310_35174.2} {RNA815_21706.1}