TomoSeq data search

Data search

Results for MligTC455_25508

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25508	13673	284.84	Mlig455_025743	Neo: - Age: Down-Down-Up	RPS23	Mlig455_025743 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_1523, RNA1509_412} {RNA1310_17173.1, RNA1509_1523, RNA1509_412} {RNA1509_1523, RNA1509_412, RNA815_25860.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_25508

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.762	8.247	0.01801	0.37473
RegionR2	-0.641	8.247	0.00428	0.05821
RegionR3	0.426	8.247	0.02073	0.24177
RegionR4	0.845	8.247	0.00005	0.00083
RegionR5	0.515	8.247	0.00400	0.02933
RegionR6	0.068	8.247	0.71799	1.00000
RegionR7	0.161	8.247	0.39832	1.00000
RegionR8	-0.613	8.247	0.00746	0.16006

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.941	8.247	0.03676	0.65390
RegenerationR2	-0.498	8.247	0.03432	0.30565
RegenerationR3	-0.676	8.247	0.00484	0.12491
RegenerationR4	-0.414	8.247	0.09012	0.46991
RegenerationR5	-0.462	8.247	0.05124	0.36479
RegenerationR6	-0.353	8.247	0.14443	0.46575
RegenerationBL	-0.203	8.247	0.35213	0.71973
RegenerationTP	-0.229	8.247	0.33705	0.78111

Genes with expression patterns similar to MligTC455_25508

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25508	13673	284.84	Mlig455_025743	Neo: - Age: Down-Down-Up	RPS23	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_025743 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_1523, RNA1509_412} {RNA1310_17173.1, RNA1509_1523, RNA1509_412} {RNA1509_1523, RNA1509_412, RNA815_25860.2}
2.	MligTC455_25509	26793	558.19	Mlig455_025772, Mlig455_064419	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=1.947	RPS23	5.97	0.998	0.999	0.987	0.999	0.999	0.988	Mlig455_025772 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2} {RNA815_25860.2} Mlig455_064419 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2, RNA1509_6690} {RNA1509_6690, RNA815_25860.2}
3.	MligTC455_47612	12518	260.79	Mlig455_002625, Mlig455_066137	Neo: - Age: - Regeneration-enriched R5: 3.777 Regeneration-enriched R3: 3.396 Regeneration-enriched BL: 3.208 Regeneration-enriched R2: 3.114 Regeneration-enriched R4: 3.065 Regeneration-enriched R6: 2.947 Regeneration-enriched TP: 2.501		1.802	-	-	-	0.845	0.957	-	Mlig455_002625 {REF} {Length: 3451} {Pfam: Dynein light chain type 1 [PF01221.20, score=52.2]; EF hand [PF00036.34, score=42.9]; EF-hand domain [PF13405.8, score=30.9]; EF-hand domain pair [PF13499.8, score=30.9]; EF hand [PF13202.8, score=28.5]; EF-hand domain pair [PF13833.8, score=23.8]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=135, Expect=7e-41]} {RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1310_13493.1, RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1509_12760, RNA1509_20734, RNA1509_38280, RNA815_12385} Mlig455_066137 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_50397} {RNA1310_23428.1} {RNA815_29721}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_25508

13673

284.84

Mlig455_025743

Neo: -

Age: Down-Down-Up

RPS23

1.000

MligTC455_25509

26793

558.19

Mlig455_025772, Mlig455_064419

Neo: Int S/G2/M

Age: Down-Up-Down, logFC(26M/2M)=1.947

RPS23

5.97

0.998

0.999

0.987

0.999

0.988

Mlig455_025772 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2} {RNA815_25860.2}

Mlig455_064419 {REF} {Length: 576} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=7e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=5e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=5e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=2e-90]} {RNA1509_6690} {RNA1310_17173.2, RNA1509_6690} {RNA1509_6690, RNA815_25860.2}

MligTC455_47612

12518

260.79

Mlig455_002625, Mlig455_066137

Neo: -

Age: -

Regeneration-enriched R5: 3.777
Regeneration-enriched R3: 3.396
Regeneration-enriched BL: 3.208
Regeneration-enriched R2: 3.114
Regeneration-enriched R4: 3.065
Regeneration-enriched R6: 2.947
Regeneration-enriched TP: 2.501

1.802

0.845

0.957

Mlig455_002625 {REF} {Length: 3451} {Pfam: Dynein light chain type 1 [PF01221.20, score=52.2]; EF hand [PF00036.34, score=42.9]; EF-hand domain [PF13405.8, score=30.9]; EF-hand domain pair [PF13499.8, score=30.9]; EF hand [PF13202.8, score=28.5]; EF-hand domain pair [PF13833.8, score=23.8]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [Score=135, Expect=7e-41]} {RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1310_13493.1, RNA1509_12760, RNA1509_20734, RNA1509_38280} {RNA1509_12760, RNA1509_20734, RNA1509_38280, RNA815_12385}

Mlig455_066137 {REF} {Length: 457} {NoTransDecoderORF} {RNA1509_50397} {RNA1310_23428.1} {RNA815_29721}